RNA–Protein interactions for RNA: ENST00000495680.2

SHROOM1-206, Transcript of shroom family member 1, humanhuman

TSL 3

Gene SHROOM1, Length 281 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-206ENST00000495680 BMP3P12645 472 aa14.35□□□□□ -0.11
SHROOM1-206ENST00000495680 GNAT2P19087 354 aa14.35□□□□□ -0.11
SHROOM1-206ENST00000495680 SNAP25P60880 206 aa14.35□□□□□ -0.11
SHROOM1-206ENST00000495680 TFAP4Q01664 338 aa14.35□□□□□ -0.11
SHROOM1-206ENST00000495680 FPGSQ05932 587 aa14.35□□□□□ -0.11
SHROOM1-206ENST00000495680 PPARAQ07869 468 aa14.35□□□□□ -0.11
SHROOM1-206ENST00000495680 CCDC129Q6ZRS4 1044 aa14.35□□□□□ -0.11
SHROOM1-206ENST00000495680 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.35□□□□□ -0.11
SHROOM1-206ENST00000495680 ARMCX2Q7L311 632 aa14.35□□□□□ -0.11
SHROOM1-206ENST00000495680 ANKRD35Q8N283 1001 aa14.35□□□□□ -0.11
SHROOM1-206ENST00000495680 TBX21Q9UL17 535 aa14.35□□□□□ -0.11
SHROOM1-206ENST00000495680 ZNF536O15090 1300 aa14.35□□□□□ -0.11
SHROOM1-206ENST00000495680 C11orf97A0A1B0GVM6 126 aaPredicted RBP14.34□□□□□ -0.11
SHROOM1-206ENST00000495680 SOWAHBA6NEL2 793 aa14.34□□□□□ -0.11
SHROOM1-206ENST00000495680 MOXD2PA6NHM9 499 aa14.34□□□□□ -0.11
SHROOM1-206ENST00000495680 TMEM232C9JQI7 657 aa14.34□□□□□ -0.11
SHROOM1-206ENST00000495680 NMT2O60551 498 aa14.34□□□□□ -0.11
SHROOM1-206ENST00000495680 ASGR1P07306 291 aa14.34□□□□□ -0.11
SHROOM1-206ENST00000495680 TSPY3P0CV98 308 aa14.34□□□□□ -0.11
SHROOM1-206ENST00000495680 TSPY8P0CW00 308 aa14.34□□□□□ -0.11
SHROOM1-206ENST00000495680 CST5P28325 142 aaPredicted RBP14.34□□□□□ -0.11
SHROOM1-206ENST00000495680 CDK7P50613 346 aa14.34□□□□□ -0.11
SHROOM1-206ENST00000495680 ZMYM1Q5SVZ6 1142 aa14.34□□□□□ -0.11
SHROOM1-206ENST00000495680 C16orf59Q7L2K0 433 aa14.34□□□□□ -0.11
SHROOM1-206ENST00000495680 CCDC144CPQ8IYA2 1237 aa14.34□□□□□ -0.11
SHROOM1-206ENST00000495680 FAM133AQ8N9E0 248 aa14.34□□□□□ -0.11
SHROOM1-206ENST00000495680 CHST13Q8NET6 341 aa14.34□□□□□ -0.11
SHROOM1-206ENST00000495680 MAFAQ8NHW3 353 aaPredicted RBP14.34□□□□□ -0.11
SHROOM1-206ENST00000495680 NUP133Q8WUM0 1156 aa14.34□□□□□ -0.11
SHROOM1-206ENST00000495680 AGBL1Q96MI9 1066 aa14.34□□□□□ -0.11
SHROOM1-206ENST00000495680 TOX2Q96NM4 488 aa14.34□□□□□ -0.11
SHROOM1-206ENST00000495680 UPF3AQ9H1J1 476 aaKnown RBP14.34□□□□□ -0.11
SHROOM1-206ENST00000495680 CTDP1Q9Y5B0 961 aaPredicted RBP14.34□□□□□ -0.11
SHROOM1-206ENST00000495680 ASTN1O14525 1302 aa14.34□□□□□ -0.11
SHROOM1-206ENST00000495680 LRRC37A2A6NM11 1700 aa14.33□□□□□ -0.12
SHROOM1-206ENST00000495680 DCDC2CA8MYV0 355 aa14.33□□□□□ -0.12
SHROOM1-206ENST00000495680 TIMP1P01033 207 aa14.33□□□□□ -0.12
SHROOM1-206ENST00000495680 MCCP23508 829 aa14.33□□□□□ -0.12
SHROOM1-206ENST00000495680 OAZ1P54368 228 aa14.33□□□□□ -0.12
SHROOM1-206ENST00000495680 GJA9P57773 515 aa14.33□□□□□ -0.12
SHROOM1-206ENST00000495680 BEX3Q00994 111 aa14.33□□□□□ -0.12
SHROOM1-206ENST00000495680 TMEM63BQ5T3F8 832 aa14.33□□□□□ -0.12
SHROOM1-206ENST00000495680 KCTD1Q719H9 257 aa14.33□□□□□ -0.12
SHROOM1-206ENST00000495680 GLT1D1Q96MS3 346 aa14.33□□□□□ -0.12
SHROOM1-206ENST00000495680 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.33□□□□□ -0.121e-6■□□□□ 10.5
SHROOM1-206ENST00000495680 FSD1Q9BTV5 496 aa14.33□□□□□ -0.12
SHROOM1-206ENST00000495680 NAPBQ9H115 298 aa14.33□□□□□ -0.12
SHROOM1-206ENST00000495680 ABHD16BQ9H3Z7 469 aa14.33□□□□□ -0.12
SHROOM1-206ENST00000495680 ZNF287Q9HBT7 754 aa14.33□□□□□ -0.12
SHROOM1-206ENST00000495680 A1CFQ9NQ94 594 aaKnown RBP14.33□□□□□ -0.12
SHROOM1-206ENST00000495680 IL17RBQ9NRM6 502 aa14.33□□□□□ -0.12
SHROOM1-206ENST00000495680 RNF146Q9NTX7 359 aa14.33□□□□□ -0.12
SHROOM1-206ENST00000495680 ISY1Q9ULR0 285 aaKnown RBP14.33□□□□□ -0.12
SHROOM1-206ENST00000495680 SYNPO2Q9UMS6 1093 aa14.33□□□□□ -0.12
SHROOM1-206ENST00000495680 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.33□□□□□ -0.12
SHROOM1-206ENST00000495680 TTC41PQ6P2S7 1318 aa14.33□□□□□ -0.12
SHROOM1-206ENST00000495680 LCTP09848 1927 aa14.33□□□□□ -0.12
SHROOM1-206ENST00000495680 GRXCR1A8MXD5 290 aa14.32□□□□□ -0.12
SHROOM1-206ENST00000495680 FOSL2P15408 326 aa14.32□□□□□ -0.12
SHROOM1-206ENST00000495680 CTDSPL2Q05D32 466 aa14.32□□□□□ -0.12
SHROOM1-206ENST00000495680 PDE4BQ07343 736 aa14.32□□□□□ -0.12
SHROOM1-206ENST00000495680 GRIN2CQ14957 1233 aa14.32□□□□□ -0.12
SHROOM1-206ENST00000495680 GNASQ5JWF2 1037 aa14.32□□□□□ -0.12
SHROOM1-206ENST00000495680 VPS53Q5VIR6 699 aa14.32□□□□□ -0.12
SHROOM1-206ENST00000495680 CCDC174Q6PII3 467 aa14.32□□□□□ -0.12
SHROOM1-206ENST00000495680 PURBQ96QR8 312 aaKnown RBP14.32□□□□□ -0.12
SHROOM1-206ENST00000495680 NACAP1Q9BZK3 213 aa14.32□□□□□ -0.12
SHROOM1-206ENST00000495680 FBXO40Q9UH90 709 aa14.32□□□□□ -0.12
SHROOM1-206ENST00000495680 ELP1O95163 1332 aa14.32□□□□□ -0.12
SHROOM1-206ENST00000495680 SPTBN5Q9NRC6 3674 aaKnown RBP14.32□□□□□ -0.12
SHROOM1-206ENST00000495680 ACRP10323 421 aa14.31□□□□□ -0.12
SHROOM1-206ENST00000495680 CSF2RAP15509 400 aa14.31□□□□□ -0.12
SHROOM1-206ENST00000495680 DNAJB2P25686 324 aa14.31□□□□□ -0.12
SHROOM1-206ENST00000495680 SLC1A4P43007 532 aa14.31□□□□□ -0.12
SHROOM1-206ENST00000495680 STAT2P52630 851 aa14.31□□□□□ -0.12
SHROOM1-206ENST00000495680 MUM1L1Q5H9M0 696 aa14.31□□□□□ -0.12
SHROOM1-206ENST00000495680 MFSD5Q6N075 450 aa14.31□□□□□ -0.12
SHROOM1-206ENST00000495680 FAM126BQ8IXS8 530 aa14.31□□□□□ -0.12
SHROOM1-206ENST00000495680 PCSK9Q8NBP7 692 aaKnown RBP14.31□□□□□ -0.12
SHROOM1-206ENST00000495680 STAG1Q8WVM7 1258 aa14.31□□□□□ -0.12
SHROOM1-206ENST00000495680 VTI1AQ96AJ9 217 aa14.31□□□□□ -0.12
SHROOM1-206ENST00000495680 GMCL1Q96IK5 515 aa14.31□□□□□ -0.12
SHROOM1-206ENST00000495680 PPP1R12CQ9BZL4 782 aa14.31□□□□□ -0.12
SHROOM1-206ENST00000495680 ACAD9Q9H845 621 aa14.31□□□□□ -0.12
SHROOM1-206ENST00000495680 PDGFCQ9NRA1 345 aa14.31□□□□□ -0.12
SHROOM1-206ENST00000495680 STX8Q9UNK0 236 aa14.31□□□□□ -0.12
SHROOM1-206ENST00000495680 MTMR7Q9Y216 660 aa14.31□□□□□ -0.12
SHROOM1-206ENST00000495680 SALL3Q9BXA9 1300 aa14.31□□□□□ -0.12
SHROOM1-206ENST00000495680 ARVCFO00192 962 aa14.3□□□□□ -0.12
SHROOM1-206ENST00000495680 ALAS1P13196 640 aa14.3□□□□□ -0.12
SHROOM1-206ENST00000495680 MX1P20591 662 aa14.3□□□□□ -0.12
SHROOM1-206ENST00000495680 PBX2P40425 430 aa14.3□□□□□ -0.12
SHROOM1-206ENST00000495680 NKX3-2P78367 333 aa14.3□□□□□ -0.12
SHROOM1-206ENST00000495680 IKQ13123 557 aaPredicted RBP14.3□□□□□ -0.12
SHROOM1-206ENST00000495680 TMEM240Q5SV17 173 aa14.3□□□□□ -0.12
SHROOM1-206ENST00000495680 CXCL17Q6UXB2 119 aa14.3□□□□□ -0.12
SHROOM1-206ENST00000495680 USP38Q8NB14 1042 aa14.3□□□□□ -0.12
SHROOM1-206ENST00000495680 TRERF1Q96PN7 1200 aa14.3□□□□□ -0.12
SHROOM1-206ENST00000495680 PRR12Q9ULL5 1215 aa14.3□□□□□ -0.12
SHROOM1-206ENST00000495680 GNEQ9Y223 722 aaKnown RBP14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms