RNA–Protein interactions for RNA: ENST00000495666.5

RFTN1-211, Transcript of raftlin, lipid raft linker 1, humanhuman

TSL 4

Gene RFTN1, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-211ENST00000495666 CWC27Q6UX04 472 aaKnown RBP12.66□□□□□ -0.38
RFTN1-211ENST00000495666 NSMFQ6X4W1 530 aa12.66□□□□□ -0.38
RFTN1-211ENST00000495666 RNF180Q86T96 592 aa12.66□□□□□ -0.38
RFTN1-211ENST00000495666 DEFB123Q8N688 67 aa12.66□□□□□ -0.38
RFTN1-211ENST00000495666 BADQ92934 168 aa12.66□□□□□ -0.38
RFTN1-211ENST00000495666 HELLSQ9NRZ9 838 aa12.66□□□□□ -0.38
RFTN1-211ENST00000495666 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.66□□□□□ -0.38
RFTN1-211ENST00000495666 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.66□□□□□ -0.38
RFTN1-211ENST00000495666 CCDC171Q6TFL3 1326 aa12.65□□□□□ -0.38
RFTN1-211ENST00000495666 SYNRGQ9UMZ2 1314 aa12.65□□□□□ -0.38
RFTN1-211ENST00000495666 A0A1W2PQ45 241 aaPredicted RBP12.65□□□□□ -0.38
RFTN1-211ENST00000495666 A0A1W2PQY0 241 aa12.65□□□□□ -0.38
RFTN1-211ENST00000495666 FGAP02671 866 aa12.65□□□□□ -0.38
RFTN1-211ENST00000495666 ZNF865P0CJ78 1059 aaPredicted RBP12.65□□□□□ -0.38
RFTN1-211ENST00000495666 HSPD1P10809 573 aaKnown RBP12.65□□□□□ -0.38
RFTN1-211ENST00000495666 MUM1L1Q5H9M0 696 aa12.65□□□□□ -0.38
RFTN1-211ENST00000495666 ARMCX2Q7L311 632 aa12.65□□□□□ -0.38
RFTN1-211ENST00000495666 CHD1LQ86WJ1 897 aa12.65□□□□□ -0.38
RFTN1-211ENST00000495666 CCDC144CPQ8IYA2 1237 aa12.65□□□□□ -0.38
RFTN1-211ENST00000495666 CHURC1Q8WUH1 139 aa12.65□□□□□ -0.38
RFTN1-211ENST00000495666 MKL1Q969V6 931 aa12.65□□□□□ -0.38
RFTN1-211ENST00000495666 TRERF1Q96PN7 1200 aa12.65□□□□□ -0.38
RFTN1-211ENST00000495666 PURBQ96QR8 312 aaKnown RBP12.65□□□□□ -0.38
RFTN1-211ENST00000495666 ACAD9Q9H845 621 aa12.65□□□□□ -0.38
RFTN1-211ENST00000495666 DIAPH3Q9NSV4 1193 aa12.65□□□□□ -0.38
RFTN1-211ENST00000495666 FAM184BQ9ULE4 1060 aa12.65□□□□□ -0.38
RFTN1-211ENST00000495666 CCPG1Q9ULG6 757 aa12.65□□□□□ -0.38
RFTN1-211ENST00000495666 PRR12Q9ULL5 1215 aa12.65□□□□□ -0.38
RFTN1-211ENST00000495666 SUPT16HQ9Y5B9 1047 aaKnown RBP12.65□□□□□ -0.38
RFTN1-211ENST00000495666 NEDD4P46934 1319 aa12.64□□□□□ -0.39
RFTN1-211ENST00000495666 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.64□□□□□ -0.39
RFTN1-211ENST00000495666 A0A1W2PPC1 479 aa12.64□□□□□ -0.39
RFTN1-211ENST00000495666 ADCY6O43306 1168 aa12.64□□□□□ -0.39
RFTN1-211ENST00000495666 SNAI1O95863 264 aaPredicted RBP12.64□□□□□ -0.39
RFTN1-211ENST00000495666 IGHA2P01877 340 aa12.64□□□□□ -0.39
RFTN1-211ENST00000495666 BEX3Q00994 111 aa12.64□□□□□ -0.39
RFTN1-211ENST00000495666 TLE2Q04725 743 aa12.64□□□□□ -0.39
RFTN1-211ENST00000495666 ACVR2BQ13705 512 aa12.64□□□□□ -0.39
RFTN1-211ENST00000495666 FAM160B2Q86V87 743 aa12.64□□□□□ -0.39
RFTN1-211ENST00000495666 TBC1D10CQ8IV04 446 aa12.64□□□□□ -0.39
RFTN1-211ENST00000495666 STAG1Q8WVM7 1258 aa12.64□□□□□ -0.39
RFTN1-211ENST00000495666 CPVLQ9H3G5 476 aa12.64□□□□□ -0.39
RFTN1-211ENST00000495666 STARD7Q9NQZ5 370 aa12.64□□□□□ -0.39
RFTN1-211ENST00000495666 PDLIM7Q9NR12 457 aa12.64□□□□□ -0.39
RFTN1-211ENST00000495666 LRRC37A2A6NM11 1700 aa12.64□□□□□ -0.39
RFTN1-211ENST00000495666 LAMA4Q16363 1823 aa12.64□□□□□ -0.39
RFTN1-211ENST00000495666 LCTP09848 1927 aa12.64□□□□□ -0.39
RFTN1-211ENST00000495666 PTPDC1A2A3K4 754 aa12.63□□□□□ -0.39
RFTN1-211ENST00000495666 GOLGA8HP0CJ92 632 aa12.63□□□□□ -0.39
RFTN1-211ENST00000495666 SDSP20132 328 aa12.63□□□□□ -0.39
RFTN1-211ENST00000495666 BMP8BP34820 402 aa12.63□□□□□ -0.39
RFTN1-211ENST00000495666 KCNA10Q16322 511 aa12.63□□□□□ -0.39
RFTN1-211ENST00000495666 CCDC144BQ3MJ40 725 aa12.63□□□□□ -0.39
RFTN1-211ENST00000495666 RCSD1Q6JBY9 416 aa12.63□□□□□ -0.39
RFTN1-211ENST00000495666 PLEKHM2Q8IWE5 1019 aa12.63□□□□□ -0.39
RFTN1-211ENST00000495666 FBXO16Q8IX29 292 aaPredicted RBP12.63□□□□□ -0.39
RFTN1-211ENST00000495666 CHST13Q8NET6 341 aa12.63□□□□□ -0.39
RFTN1-211ENST00000495666 GMCL1Q96IK5 515 aa12.63□□□□□ -0.39
RFTN1-211ENST00000495666 TMEM47Q9BQJ4 181 aa12.63□□□□□ -0.39
RFTN1-211ENST00000495666 A1CFQ9NQ94 594 aaKnown RBP12.63□□□□□ -0.39
RFTN1-211ENST00000495666 RNF216Q9NWF9 866 aaPredicted RBP12.63□□□□□ -0.39
RFTN1-211ENST00000495666 FBXO40Q9UH90 709 aa12.63□□□□□ -0.39
RFTN1-211ENST00000495666 ZNF536O15090 1300 aa12.62□□□□□ -0.39
RFTN1-211ENST00000495666 MYH6P13533 1939 aa12.62□□□□□ -0.39
RFTN1-211ENST00000495666 DNAJC25-GNG10A0A024R161 153 aa12.62□□□□□ -0.39
RFTN1-211ENST00000495666 TRIM43BA6NCK2 446 aa12.62□□□□□ -0.39
RFTN1-211ENST00000495666 RAG1P15918 1043 aa12.62□□□□□ -0.39
RFTN1-211ENST00000495666 ACLYP53396 1101 aa12.62□□□□□ -0.39
RFTN1-211ENST00000495666 USH1GQ495M9 461 aa12.62□□□□□ -0.39
RFTN1-211ENST00000495666 C9orf50Q5SZB4 431 aa12.62□□□□□ -0.39
RFTN1-211ENST00000495666 SYDE2Q5VT97 1194 aa12.62□□□□□ -0.39
RFTN1-211ENST00000495666 MFSD6Q6ZSS7 791 aa12.62□□□□□ -0.39
RFTN1-211ENST00000495666 SMC5Q8IY18 1101 aa12.62□□□□□ -0.39
RFTN1-211ENST00000495666 TRIM43Q96BQ3 446 aaPredicted RBP12.62□□□□□ -0.39
RFTN1-211ENST00000495666 FGD4Q96M96 766 aa12.62□□□□□ -0.39
RFTN1-211ENST00000495666 TMEM39AQ9NV64 488 aa12.62□□□□□ -0.39
RFTN1-211ENST00000495666 PHF24Q9UPV7 400 aa12.62□□□□□ -0.39
RFTN1-211ENST00000495666 DIS3Q9Y2L1 958 aaKnown RBP12.62□□□□□ -0.39
RFTN1-211ENST00000495666 SYNGAP1Q96PV0 1343 aa12.62□□□□□ -0.39
RFTN1-211ENST00000495666 SOWAHBA6NEL2 793 aa12.61□□□□□ -0.39
RFTN1-211ENST00000495666 ATP2A1O14983 1001 aa12.61□□□□□ -0.39
RFTN1-211ENST00000495666 DHX16O60231 1041 aaKnown RBP12.61□□□□□ -0.39
RFTN1-211ENST00000495666 ADAMTS4O75173 837 aa12.61□□□□□ -0.39
RFTN1-211ENST00000495666 CLTBP09497 229 aa12.61□□□□□ -0.39
RFTN1-211ENST00000495666 TOP1P11387 765 aaKnown RBP12.61□□□□□ -0.39
RFTN1-211ENST00000495666 CALML3P27482 149 aa12.61□□□□□ -0.39
RFTN1-211ENST00000495666 CHMP4BP1P59074 171 aa12.61□□□□□ -0.39
RFTN1-211ENST00000495666 NUCB1Q02818 461 aa12.61□□□□□ -0.39
RFTN1-211ENST00000495666 SHHQ15465 462 aa12.61□□□□□ -0.39
RFTN1-211ENST00000495666 TMEM63BQ5T3F8 832 aa12.61□□□□□ -0.39
RFTN1-211ENST00000495666 PPP1R13LQ8WUF5 828 aa12.61□□□□□ -0.39
RFTN1-211ENST00000495666 DCAF4Q8WV16 495 aa12.61□□□□□ -0.39
RFTN1-211ENST00000495666 PPP1R12CQ9BZL4 782 aa12.61□□□□□ -0.39
RFTN1-211ENST00000495666 SPC25Q9HBM1 224 aa12.61□□□□□ -0.39
RFTN1-211ENST00000495666 ANAPC4Q9UJX5 808 aa12.61□□□□□ -0.39
RFTN1-211ENST00000495666 B4E1Z4 1266 aa12.6□□□□□ -0.39
RFTN1-211ENST00000495666 NFIBO00712 420 aa12.6□□□□□ -0.39
RFTN1-211ENST00000495666 ZNF213O14771 459 aa12.6□□□□□ -0.39
RFTN1-211ENST00000495666 ORC4O43929 436 aa12.6□□□□□ -0.39
RFTN1-211ENST00000495666 KDM4AO75164 1064 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms