RNA–Protein interactions for RNA: ENST00000495522.1

CALD1-222, Transcript of caldesmon 1, humanhuman

TSL 5 BASIC

Gene CALD1, Length 2,199 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-222ENST00000495522 CPVLQ9H3G5 476 aa17.3■□□□□ 0.36
CALD1-222ENST00000495522 LRRC37AA6NMS7 1700 aa17.3■□□□□ 0.36
CALD1-222ENST00000495522 LTBP1Q14766 1721 aa17.3■□□□□ 0.36
CALD1-222ENST00000495522 FOCADQ5VW36 1801 aa17.3■□□□□ 0.36
CALD1-222ENST00000495522 SMCO2A6NFE2 343 aa17.3■□□□□ 0.36
CALD1-222ENST00000495522 PP2D1A8MPX8 630 aa17.3■□□□□ 0.36
CALD1-222ENST00000495522 POLRMTO00411 1230 aaKnown RBP17.3■□□□□ 0.36
CALD1-222ENST00000495522 SEMA3FQ13275 785 aa17.3■□□□□ 0.36
CALD1-222ENST00000495522 KCNB1Q14721 858 aa17.3■□□□□ 0.36
CALD1-222ENST00000495522 SOGA3Q5TF21 947 aa17.3■□□□□ 0.36
CALD1-222ENST00000495522 DAGLAQ9Y4D2 1042 aa17.3■□□□□ 0.36
CALD1-222ENST00000495522 MFAP3LO75121 409 aa17.29■□□□□ 0.36
CALD1-222ENST00000495522 COBLO75128 1261 aa17.29■□□□□ 0.36
CALD1-222ENST00000495522 TPM1P09493 284 aa17.29■□□□□ 0.36
CALD1-222ENST00000495522 CNGA4Q8IV77 575 aa17.29■□□□□ 0.36
CALD1-222ENST00000495522 CCDC51Q96ER9 411 aa17.29■□□□□ 0.36
CALD1-222ENST00000495522 AK8Q96MA6 479 aa17.29■□□□□ 0.36
CALD1-222ENST00000495522 GDAQ9Y2T3 454 aa17.29■□□□□ 0.36
CALD1-222ENST00000495522 PLIN4Q96Q06 1357 aa17.29■□□□□ 0.36
CALD1-222ENST00000495522 PPEF1O14829 653 aaPredicted RBP17.29■□□□□ 0.36
CALD1-222ENST00000495522 N4BP3O15049 544 aa17.29■□□□□ 0.36
CALD1-222ENST00000495522 OR52Z1P0C646 297 aa17.29■□□□□ 0.36
CALD1-222ENST00000495522 CCT6AP40227 531 aaKnown RBP17.29■□□□□ 0.36
CALD1-222ENST00000495522 PRCPP42785 496 aa17.29■□□□□ 0.36
CALD1-222ENST00000495522 TCP11X2Q5H9J9 407 aa17.29■□□□□ 0.36
CALD1-222ENST00000495522 SP8Q8IXZ3 490 aa17.29■□□□□ 0.36
CALD1-222ENST00000495522 CUEDC2Q9H467 287 aa17.29■□□□□ 0.36
CALD1-222ENST00000495522 MAGEF1Q9HAY2 307 aa17.29■□□□□ 0.36
CALD1-222ENST00000495522 KBTBD4Q9NVX7 518 aa17.29■□□□□ 0.36
CALD1-222ENST00000495522 KCNJ18B7U540 433 aa17.28■□□□□ 0.36
CALD1-222ENST00000495522 H7C1D1 291 aa17.28■□□□□ 0.36
CALD1-222ENST00000495522 FANCGO15287 622 aa17.28■□□□□ 0.36
CALD1-222ENST00000495522 URI1O94763 535 aaPredicted RBP17.28■□□□□ 0.36
CALD1-222ENST00000495522 CCDC175P0C221 793 aa17.28■□□□□ 0.36
CALD1-222ENST00000495522 COPB1P53618 953 aaKnown RBP17.28■□□□□ 0.36
CALD1-222ENST00000495522 GNG11P61952 73 aa17.28■□□□□ 0.36
CALD1-222ENST00000495522 GTF2IP78347 998 aa17.28■□□□□ 0.36
CALD1-222ENST00000495522 CBX1P83916 185 aa17.28■□□□□ 0.36
CALD1-222ENST00000495522 KCNJ12Q14500 433 aa17.28■□□□□ 0.36
CALD1-222ENST00000495522 ADSSL1Q8N142 457 aa17.28■□□□□ 0.36
CALD1-222ENST00000495522 CPLX3Q8WVH0 158 aa17.28■□□□□ 0.36
CALD1-222ENST00000495522 SUGT1Q9Y2Z0 365 aa17.28■□□□□ 0.36
CALD1-222ENST00000495522 SOWAHDA6NJG2 315 aa17.28■□□□□ 0.36
CALD1-222ENST00000495522 hCG_1984214I3L0E3 225 aa17.28■□□□□ 0.36
CALD1-222ENST00000495522 CCNT1O60563 726 aaKnown RBP17.28■□□□□ 0.36
CALD1-222ENST00000495522 CASQ1P31415 396 aa17.28■□□□□ 0.36
CALD1-222ENST00000495522 LETM2Q2VYF4 491 aa17.28■□□□□ 0.36
CALD1-222ENST00000495522 KMT5BQ4FZB7 885 aa17.28■□□□□ 0.36
CALD1-222ENST00000495522 POTEAQ6S8J7 498 aa17.28■□□□□ 0.36
CALD1-222ENST00000495522 NEK8Q86SG6 692 aa17.28■□□□□ 0.36
CALD1-222ENST00000495522 ZNF713Q8N859 430 aaPredicted RBP17.28■□□□□ 0.36
CALD1-222ENST00000495522 PIGSQ96S52 555 aa17.28■□□□□ 0.36
CALD1-222ENST00000495522 DESI2Q9BSY9 194 aa17.28■□□□□ 0.36
CALD1-222ENST00000495522 COA1Q9GZY4 146 aa17.28■□□□□ 0.36
CALD1-222ENST00000495522 PARP3Q9Y6F1 533 aa17.28■□□□□ 0.36
CALD1-222ENST00000495522 ESYT2A0FGR8 921 aa17.27■□□□□ 0.36
CALD1-222ENST00000495522 SPDYE4A6NLX3 237 aa17.27■□□□□ 0.36
CALD1-222ENST00000495522 USP17L5A8MUK1 530 aa17.27■□□□□ 0.36
CALD1-222ENST00000495522 GYPCP04921 128 aa17.27■□□□□ 0.36
CALD1-222ENST00000495522 CASP14P31944 242 aa17.27■□□□□ 0.36
CALD1-222ENST00000495522 ORC2Q13416 577 aaPredicted RBP17.27■□□□□ 0.36
CALD1-222ENST00000495522 STIM1Q13586 685 aa17.27■□□□□ 0.36
CALD1-222ENST00000495522 ERCC6LQ2NKX8 1250 aa17.27■□□□□ 0.36
CALD1-222ENST00000495522 CABP7Q86V35 215 aa17.27■□□□□ 0.36
CALD1-222ENST00000495522 LRRN4CLQ8ND94 238 aa17.27■□□□□ 0.36
CALD1-222ENST00000495522 VPS16Q9H269 839 aa17.27■□□□□ 0.36
CALD1-222ENST00000495522 RIOX1Q9H6W3 641 aa17.27■□□□□ 0.36
CALD1-222ENST00000495522 VAT1LQ9HCJ6 419 aa17.27■□□□□ 0.36
CALD1-222ENST00000495522 OGFRQ9NZT2 677 aa17.27■□□□□ 0.36
CALD1-222ENST00000495522 MAPK8IP1Q9UQF2 711 aa17.27■□□□□ 0.36
CALD1-222ENST00000495522 KLRC4O43908 158 aa17.26■□□□□ 0.35
CALD1-222ENST00000495522 RHOBTB3O94955 611 aa17.26■□□□□ 0.35
CALD1-222ENST00000495522 TRIM14Q14142 442 aa17.26■□□□□ 0.35
CALD1-222ENST00000495522 MTF1Q14872 753 aa17.26■□□□□ 0.35
CALD1-222ENST00000495522 UTP14CQ5TAP6 766 aaKnown RBP17.26■□□□□ 0.35
CALD1-222ENST00000495522 FBXO38Q6PIJ6 1188 aa17.26■□□□□ 0.35
CALD1-222ENST00000495522 REXO1Q8N1G1 1221 aaKnown RBP17.26■□□□□ 0.35
CALD1-222ENST00000495522 MNS1Q8NEH6 495 aa17.26■□□□□ 0.35
CALD1-222ENST00000495522 MTMR4Q9NYA4 1195 aa17.26■□□□□ 0.35
CALD1-222ENST00000495522 TAB2Q9NYJ8 693 aa17.26■□□□□ 0.35
CALD1-222ENST00000495522 EP400Q96L91 3159 aa17.26■□□□□ 0.35
CALD1-222ENST00000495522 PDHBP11177 359 aa17.26■□□□□ 0.35
CALD1-222ENST00000495522 FECHP22830 423 aa17.26■□□□□ 0.35
CALD1-222ENST00000495522 GABPAQ06546 454 aa17.26■□□□□ 0.35
CALD1-222ENST00000495522 PICALMQ13492 652 aa17.26■□□□□ 0.35
CALD1-222ENST00000495522 ASPRV1Q53RT3 343 aa17.26■□□□□ 0.35
CALD1-222ENST00000495522 RAD9BQ6WBX8 426 aa17.26■□□□□ 0.35
CALD1-222ENST00000495522 WDR24Q96S15 920 aa17.26■□□□□ 0.35
CALD1-222ENST00000495522 PLIN2Q99541 437 aa17.26■□□□□ 0.35
CALD1-222ENST00000495522 DDX41Q9UJV9 622 aaKnown RBP17.26■□□□□ 0.35
CALD1-222ENST00000495522 ATP6V0A2Q9Y487 856 aa17.26■□□□□ 0.35
CALD1-222ENST00000495522 ADGRG1Q9Y653 693 aa17.26■□□□□ 0.35
CALD1-222ENST00000495522 RIMBP2O15034 1052 aa17.25■□□□□ 0.35
CALD1-222ENST00000495522 PLCG1P19174 1290 aa17.25■□□□□ 0.35
CALD1-222ENST00000495522 FXR1P51114 621 aaKnown RBP eCLIP17.25■□□□□ 0.35
CALD1-222ENST00000495522 TXNRD1Q16881 649 aa17.25■□□□□ 0.35
CALD1-222ENST00000495522 UBA5Q9GZZ9 404 aa17.25■□□□□ 0.35
CALD1-222ENST00000495522 PSMA7O14818 248 aa17.25■□□□□ 0.35
CALD1-222ENST00000495522 GIMAP8Q8ND71 665 aaPredicted RBP17.25■□□□□ 0.35
CALD1-222ENST00000495522 TBCKQ8TEA7 893 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms