RNA–Protein interactions for RNA: ENST00000495434.1

MRPL55-232, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 5

Gene MRPL55, Length 224 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-232ENST00000495434 PNMA2Q9UL42 364 aa16.48■□□□□ 0.23
MRPL55-232ENST00000495434 U3KPZ7 1027 aaPredicted RBP16.48■□□□□ 0.23
MRPL55-232ENST00000495434 CEP290O15078 2479 aa16.47■□□□□ 0.23
MRPL55-232ENST00000495434 SMCHD1A6NHR9 2005 aa16.47■□□□□ 0.23
MRPL55-232ENST00000495434 H0YGN5 161 aa16.47■□□□□ 0.23
MRPL55-232ENST00000495434 EVI5O60447 810 aa16.47■□□□□ 0.23
MRPL55-232ENST00000495434 SLC4A3P48751 1232 aa16.47■□□□□ 0.23
MRPL55-232ENST00000495434 ZNF543Q08ER8 600 aa16.47■□□□□ 0.23
MRPL55-232ENST00000495434 SYDE2Q5VT97 1194 aa16.47■□□□□ 0.23
MRPL55-232ENST00000495434 RASGRP2Q7LDG7 609 aa16.47■□□□□ 0.23
MRPL55-232ENST00000495434 AGBL1Q96MI9 1066 aa16.47■□□□□ 0.23
MRPL55-232ENST00000495434 ZSCAN10Q96SZ4 725 aaPredicted RBP16.47■□□□□ 0.23
MRPL55-232ENST00000495434 MTMR7Q9Y216 660 aa16.47■□□□□ 0.23
MRPL55-232ENST00000495434 PFASO15067 1338 aa16.46■□□□□ 0.23
MRPL55-232ENST00000495434 DNM1LO00429 736 aa16.46■□□□□ 0.23
MRPL55-232ENST00000495434 ICAM1P05362 532 aa16.46■□□□□ 0.23
MRPL55-232ENST00000495434 PTH1RQ03431 593 aa16.46■□□□□ 0.23
MRPL55-232ENST00000495434 PRAMEF19Q5SWL8 479 aa16.46■□□□□ 0.23
MRPL55-232ENST00000495434 TTBK2Q6IQ55 1244 aa16.46■□□□□ 0.23
MRPL55-232ENST00000495434 ARRDC4Q8NCT1 418 aa16.46■□□□□ 0.23
MRPL55-232ENST00000495434 PNMA1Q8ND90 353 aa16.46■□□□□ 0.23
MRPL55-232ENST00000495434 MAP4K1Q92918 833 aa16.46■□□□□ 0.23
MRPL55-232ENST00000495434 CHMP4CQ96CF2 233 aa16.46■□□□□ 0.23
MRPL55-232ENST00000495434 TRERF1Q96PN7 1200 aa16.46■□□□□ 0.23
MRPL55-232ENST00000495434 ZKSCAN3Q9BRR0 538 aa16.46■□□□□ 0.23
MRPL55-232ENST00000495434 RNF146Q9NTX7 359 aa16.46■□□□□ 0.23
MRPL55-232ENST00000495434 CNPY2Q9Y2B0 182 aa16.46■□□□□ 0.23
MRPL55-232ENST00000495434 ALPK3Q96L96 1907 aa16.46■□□□□ 0.23
MRPL55-232ENST00000495434 CYP21A2P08686 494 aa16.45■□□□□ 0.22
MRPL55-232ENST00000495434 ALAS1P13196 640 aa16.45■□□□□ 0.22
MRPL55-232ENST00000495434 SLC16A2P36021 539 aa16.45■□□□□ 0.22
MRPL55-232ENST00000495434 TRDNQ13061 729 aa16.45■□□□□ 0.22
MRPL55-232ENST00000495434 BMP2KLQ5H9B9 411 aa16.45■□□□□ 0.22
MRPL55-232ENST00000495434 CCDC174Q6PII3 467 aa16.45■□□□□ 0.22
MRPL55-232ENST00000495434 ENAHQ8N8S7 591 aaPredicted RBP16.45■□□□□ 0.22
MRPL55-232ENST00000495434 UBAC1Q9BSL1 405 aa16.45■□□□□ 0.22
MRPL55-232ENST00000495434 KAT14Q9H8E8 782 aa16.45■□□□□ 0.22
MRPL55-232ENST00000495434 GPCPD1Q9NPB8 672 aa16.45■□□□□ 0.22
MRPL55-232ENST00000495434 A1CFQ9NQ94 594 aaKnown RBP16.45■□□□□ 0.22
MRPL55-232ENST00000495434 HOMER2Q9NSB8 354 aa16.45■□□□□ 0.22
MRPL55-232ENST00000495434 CCPG1Q9ULG6 757 aa16.45■□□□□ 0.22
MRPL55-232ENST00000495434 TNKSO95271 1327 aa16.45■□□□□ 0.22
MRPL55-232ENST00000495434 FRMPD2Q68DX3 1309 aaPredicted RBP16.45■□□□□ 0.22
MRPL55-232ENST00000495434 SNAI1O95863 264 aaPredicted RBP16.44■□□□□ 0.22
MRPL55-232ENST00000495434 ZNF865P0CJ78 1059 aaPredicted RBP16.44■□□□□ 0.22
MRPL55-232ENST00000495434 FAM133AQ8N9E0 248 aa16.44■□□□□ 0.22
MRPL55-232ENST00000495434 FGD4Q96M96 766 aa16.44■□□□□ 0.22
MRPL55-232ENST00000495434 POTEB2H3BUK9 544 aa16.43■□□□□ 0.22
MRPL55-232ENST00000495434 RARBP10826 455 aa16.43■□□□□ 0.22
MRPL55-232ENST00000495434 AKR1A1P14550 325 aa16.43■□□□□ 0.22
MRPL55-232ENST00000495434 SNAP25P60880 206 aa16.43■□□□□ 0.22
MRPL55-232ENST00000495434 SEC23AQ15436 765 aa16.43■□□□□ 0.22
MRPL55-232ENST00000495434 ASPRV1Q53RT3 343 aa16.43■□□□□ 0.22
MRPL55-232ENST00000495434 ABHD16BQ9H3Z7 469 aa16.43■□□□□ 0.22
MRPL55-232ENST00000495434 WDR19Q8NEZ3 1342 aa16.43■□□□□ 0.22
MRPL55-232ENST00000495434 KBTBD13C9JR72 458 aa16.42■□□□□ 0.22
MRPL55-232ENST00000495434 TAL1P17542 331 aaPredicted RBP16.42■□□□□ 0.22
MRPL55-232ENST00000495434 MUM1L1Q5H9M0 696 aa16.42■□□□□ 0.22
MRPL55-232ENST00000495434 IFIT1BQ5T764 474 aaKnown RBP16.42■□□□□ 0.22
MRPL55-232ENST00000495434 KIAA1211Q6ZU35 1233 aa16.42■□□□□ 0.22
MRPL55-232ENST00000495434 MAF1Q9H063 256 aa16.42■□□□□ 0.22
MRPL55-232ENST00000495434 CYP39A1Q9NYL5 469 aa16.42■□□□□ 0.22
MRPL55-232ENST00000495434 FAM184BQ9ULE4 1060 aa16.42■□□□□ 0.22
MRPL55-232ENST00000495434 MCM3APO60318 1980 aa16.42■□□□□ 0.22
MRPL55-232ENST00000495434 LOC102724159A0A0B4J2E5 919 aa16.41■□□□□ 0.22
MRPL55-232ENST00000495434 ASB14A6NK59 587 aa16.41■□□□□ 0.22
MRPL55-232ENST00000495434 CNTN2Q02246 1040 aa16.41■□□□□ 0.22
MRPL55-232ENST00000495434 ACVR2BQ13705 512 aa16.41■□□□□ 0.22
MRPL55-232ENST00000495434 PWP2Q15269 919 aaKnown RBP16.41■□□□□ 0.22
MRPL55-232ENST00000495434 LRRC41Q15345 812 aa16.41■□□□□ 0.22
MRPL55-232ENST00000495434 HABP4Q5JVS0 413 aaKnown RBP16.41■□□□□ 0.22
MRPL55-232ENST00000495434 CYB5R4Q7L1T6 521 aa16.41■□□□□ 0.22
MRPL55-232ENST00000495434 ARMCX2Q7L311 632 aa16.41■□□□□ 0.22
MRPL55-232ENST00000495434 NCOA7Q8NI08 942 aa16.41■□□□□ 0.22
MRPL55-232ENST00000495434 ESYT1Q9BSJ8 1104 aa16.41■□□□□ 0.22
MRPL55-232ENST00000495434 SENP6Q9GZR1 1112 aaPredicted RBP16.41■□□□□ 0.22
MRPL55-232ENST00000495434 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.41■□□□□ 0.22
MRPL55-232ENST00000495434 E7EWF7 191 aa16.4■□□□□ 0.22
MRPL55-232ENST00000495434 PARP1P09874 1014 aaKnown RBP16.4■□□□□ 0.22
MRPL55-232ENST00000495434 GOLGA8HP0CJ92 632 aa16.4■□□□□ 0.22
MRPL55-232ENST00000495434 LRRC26Q2I0M4 334 aa16.4■□□□□ 0.22
MRPL55-232ENST00000495434 GJC2Q5T442 439 aaPredicted RBP16.4■□□□□ 0.22
MRPL55-232ENST00000495434 ANO1Q5XXA6 986 aa16.4■□□□□ 0.22
MRPL55-232ENST00000495434 RALYLQ86SE5 291 aaKnown RBP16.4■□□□□ 0.22
MRPL55-232ENST00000495434 CCDC144CPQ8IYA2 1237 aa16.4■□□□□ 0.22
MRPL55-232ENST00000495434 CCDC136Q96JN2 1154 aa16.4■□□□□ 0.22
MRPL55-232ENST00000495434 XPNPEP3Q9NQH7 507 aa16.4■□□□□ 0.22
MRPL55-232ENST00000495434 COLQQ9Y215 455 aaPredicted RBP16.4■□□□□ 0.22
MRPL55-232ENST00000495434 RBM8AQ9Y5S9 174 aaKnown RBP16.4■□□□□ 0.22
MRPL55-232ENST00000495434 ERICH2A1L162 156 aa16.39■□□□□ 0.21
MRPL55-232ENST00000495434 SOWAHBA6NEL2 793 aa16.39■□□□□ 0.21
MRPL55-232ENST00000495434 DUSP11O75319 330 aaKnown RBP16.39■□□□□ 0.21
MRPL55-232ENST00000495434 SART3Q15020 963 aaKnown RBP16.39■□□□□ 0.21
MRPL55-232ENST00000495434 NSMFQ6X4W1 530 aa16.39■□□□□ 0.21
MRPL55-232ENST00000495434 RNF180Q86T96 592 aa16.39■□□□□ 0.21
MRPL55-232ENST00000495434 C7orf61Q8IZ16 206 aa16.39■□□□□ 0.21
MRPL55-232ENST00000495434 RGS22Q8NE09 1264 aa16.39■□□□□ 0.21
MRPL55-232ENST00000495434 CLEC4DQ8WXI8 215 aa16.39■□□□□ 0.21
MRPL55-232ENST00000495434 TSEN34Q9BSV6 310 aaKnown RBP16.39■□□□□ 0.21
MRPL55-232ENST00000495434 MTA3Q9BTC8 594 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms