RNA–Protein interactions for RNA: ENST00000494977.1

FGD4-208, Transcript of FYVE, RhoGEF and PH domain containing 4, humanhuman

TSL 2

Gene FGD4, Length 2,349 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGD4-208ENST00000494977 FBXO9Q9UK97 447 aaPredicted RBP6.96□□□□□ -1.29
FGD4-208ENST00000494977 TRIM35Q9UPQ4 493 aa6.96□□□□□ -1.29
FGD4-208ENST00000494977 SPO11Q9Y5K1 396 aa6.96□□□□□ -1.29
FGD4-208ENST00000494977 ARHGEF40Q8TER5 1519 aa6.96□□□□□ -1.29
FGD4-208ENST00000494977 AKR1B10O60218 316 aa6.96□□□□□ -1.3
FGD4-208ENST00000494977 TBC1D12O60347 775 aa6.96□□□□□ -1.3
FGD4-208ENST00000494977 PDHA1P08559 390 aa6.96□□□□□ -1.3
FGD4-208ENST00000494977 TUBP50607 506 aa6.96□□□□□ -1.3
FGD4-208ENST00000494977 PDE1BQ01064 536 aa6.96□□□□□ -1.3
FGD4-208ENST00000494977 RESTQ13127 1097 aa6.96□□□□□ -1.3
FGD4-208ENST00000494977 TSR1Q2NL82 804 aaKnown RBP6.96□□□□□ -1.3
FGD4-208ENST00000494977 RASIP1Q5U651 963 aa6.96□□□□□ -1.3
FGD4-208ENST00000494977 TCERG1LQ5VWI1 586 aa6.96□□□□□ -1.3
FGD4-208ENST00000494977 OR52E8Q6IFG1 317 aa6.96□□□□□ -1.3
FGD4-208ENST00000494977 KLC3Q6P597 504 aa6.96□□□□□ -1.3
FGD4-208ENST00000494977 LARP1Q6PKG0 1096 aaKnown RBP6.96□□□□□ -1.3
FGD4-208ENST00000494977 TRAPPC11Q7Z392 1133 aa6.96□□□□□ -1.3
FGD4-208ENST00000494977 MLKLQ8NB16 471 aa6.96□□□□□ -1.3
FGD4-208ENST00000494977 CCDC197Q8NCU1 140 aa6.96□□□□□ -1.3
FGD4-208ENST00000494977 DEPTORQ8TB45 409 aa6.96□□□□□ -1.3
FGD4-208ENST00000494977 CAGE1Q8TC20 777 aa6.96□□□□□ -1.3
FGD4-208ENST00000494977 NCSTNQ92542 709 aa6.96□□□□□ -1.3
FGD4-208ENST00000494977 DPF2Q92785 391 aa6.96□□□□□ -1.3
FGD4-208ENST00000494977 IFT43Q96FT9 208 aa6.96□□□□□ -1.3
FGD4-208ENST00000494977 IFT74Q96LB3 600 aa6.96□□□□□ -1.3
FGD4-208ENST00000494977 AGBL1Q96MI9 1066 aa6.96□□□□□ -1.3
FGD4-208ENST00000494977 SLF1Q9BQI6 1058 aa6.96□□□□□ -1.3
FGD4-208ENST00000494977 DDX21Q9NR30 783 aaKnown RBP eCLIP6.96□□□□□ -1.3
FGD4-208ENST00000494977 CCDC87Q9NVE4 849 aa6.96□□□□□ -1.3
FGD4-208ENST00000494977 PDP2Q9P2J9 529 aa6.96□□□□□ -1.3
FGD4-208ENST00000494977 SAR1BQ9Y6B6 198 aa6.96□□□□□ -1.3
FGD4-208ENST00000494977 EMILIN1Q9Y6C2 1016 aa6.96□□□□□ -1.3
FGD4-208ENST00000494977 ATP10DQ9P241 1426 aa6.96□□□□□ -1.3
FGD4-208ENST00000494977 CROCC2H7BZ55 1655 aa6.95□□□□□ -1.3
FGD4-208ENST00000494977 IFIT3O14879 490 aaKnown RBP6.95□□□□□ -1.3
FGD4-208ENST00000494977 HNRNPRO43390 633 aaKnown RBP6.95□□□□□ -1.3
FGD4-208ENST00000494977 NDUFB5O43674 189 aa6.95□□□□□ -1.3
FGD4-208ENST00000494977 ABL1P00519 1130 aa6.95□□□□□ -1.3
FGD4-208ENST00000494977 MYCLP1P12525 358 aaPredicted RBP6.95□□□□□ -1.3
FGD4-208ENST00000494977 FUT4P22083 530 aa6.95□□□□□ -1.3
FGD4-208ENST00000494977 KRT9P35527 623 aa6.95□□□□□ -1.3
FGD4-208ENST00000494977 ME1P48163 572 aa6.95□□□□□ -1.3
FGD4-208ENST00000494977 MTTPP55157 894 aa6.95□□□□□ -1.3
FGD4-208ENST00000494977 FAM69CQ0P6D2 419 aa6.95□□□□□ -1.3
FGD4-208ENST00000494977 POLA2Q14181 598 aa6.95□□□□□ -1.3
FGD4-208ENST00000494977 POTEEQ6S8J3 1075 aa6.95□□□□□ -1.3
FGD4-208ENST00000494977 OLFM4Q6UX06 510 aa6.95□□□□□ -1.3
FGD4-208ENST00000494977 LRRC49Q8IUZ0 686 aa6.95□□□□□ -1.3
FGD4-208ENST00000494977 GSPT2Q8IYD1 628 aaKnown RBP6.95□□□□□ -1.3
FGD4-208ENST00000494977 FMR1NBQ8N0W7 255 aaPredicted RBP6.95□□□□□ -1.3
FGD4-208ENST00000494977 FNBP4Q8N3X1 1017 aaPredicted RBP6.95□□□□□ -1.3
FGD4-208ENST00000494977 NECAB1Q8N987 351 aa6.95□□□□□ -1.3
FGD4-208ENST00000494977 HAUS1Q96CS2 278 aa6.95□□□□□ -1.3
FGD4-208ENST00000494977 IQCDQ96DY2 449 aa6.95□□□□□ -1.3
FGD4-208ENST00000494977 ZIM3Q96PE6 472 aa6.95□□□□□ -1.3
FGD4-208ENST00000494977 TAF1DQ9H5J8 278 aaPredicted RBP6.95□□□□□ -1.3
FGD4-208ENST00000494977 ZSWIM6Q9HCJ5 1215 aa6.95□□□□□ -1.3
FGD4-208ENST00000494977 LARSQ9P2J5 1176 aaKnown RBP6.95□□□□□ -1.3
FGD4-208ENST00000494977 DKK3Q9UBP4 350 aa6.95□□□□□ -1.3
FGD4-208ENST00000494977 CHMP2BQ9UQN3 213 aa6.95□□□□□ -1.3
FGD4-208ENST00000494977 EFR3BQ9Y2G0 817 aa6.95□□□□□ -1.3
FGD4-208ENST00000494977 CUL7Q14999 1698 aa6.95□□□□□ -1.3
FGD4-208ENST00000494977 AOX1Q06278 1338 aa6.95□□□□□ -1.3
FGD4-208ENST00000494977 IFT140Q96RY7 1462 aa6.95□□□□□ -1.3
FGD4-208ENST00000494977 SOWAHDA6NJG2 315 aa6.95□□□□□ -1.3
FGD4-208ENST00000494977 EIF4E1BA6NMX2 242 aaKnown RBP6.95□□□□□ -1.3
FGD4-208ENST00000494977 RGL2O15211 777 aa6.95□□□□□ -1.3
FGD4-208ENST00000494977 MAP3K13O43283 966 aa6.95□□□□□ -1.3
FGD4-208ENST00000494977 ZMYND10O75800 440 aa6.95□□□□□ -1.3
FGD4-208ENST00000494977 LDHAP00338 332 aaKnown RBP6.95□□□□□ -1.3
FGD4-208ENST00000494977 PDGFRBP09619 1106 aa6.95□□□□□ -1.3
FGD4-208ENST00000494977 CCT8P50990 548 aa6.95□□□□□ -1.3
FGD4-208ENST00000494977 PMS2P54278 862 aa6.95□□□□□ -1.3
FGD4-208ENST00000494977 PLOD1Q02809 727 aaPredicted RBP6.95□□□□□ -1.3
FGD4-208ENST00000494977 GSTM4Q03013 218 aa6.95□□□□□ -1.3
FGD4-208ENST00000494977 PDE4BQ07343 736 aa6.95□□□□□ -1.3
FGD4-208ENST00000494977 DMPKQ09013 629 aa6.95□□□□□ -1.3
FGD4-208ENST00000494977 ITGB3BPQ13352 177 aaPredicted RBP6.95□□□□□ -1.3
FGD4-208ENST00000494977 ITGA7Q13683 1181 aa6.95□□□□□ -1.3
FGD4-208ENST00000494977 BYSLQ13895 437 aaKnown RBP6.95□□□□□ -1.3
FGD4-208ENST00000494977 ITIH4Q14624 930 aa6.95□□□□□ -1.3
FGD4-208ENST00000494977 P3H1Q32P28 736 aa6.95□□□□□ -1.3
FGD4-208ENST00000494977 CCDC153Q494R4 210 aa6.95□□□□□ -1.3
FGD4-208ENST00000494977 CCDC152Q4G0S7 254 aa6.95□□□□□ -1.3
FGD4-208ENST00000494977 CATIPQ7Z7H3 387 aa6.95□□□□□ -1.3
FGD4-208ENST00000494977 PPFIBP1Q86W92 1011 aa6.95□□□□□ -1.3
FGD4-208ENST00000494977 IRGQQ8WZA9 623 aa6.95□□□□□ -1.3
FGD4-208ENST00000494977 LENG1Q96BZ8 264 aaPredicted RBP6.95□□□□□ -1.3
FGD4-208ENST00000494977 PLEKHF1Q96S99 279 aa6.95□□□□□ -1.3
FGD4-208ENST00000494977 CCDC28BQ9BUN5 200 aa6.95□□□□□ -1.3
FGD4-208ENST00000494977 TIPINQ9BVW5 301 aa6.95□□□□□ -1.3
FGD4-208ENST00000494977 SYNCQ9H7C4 482 aa6.95□□□□□ -1.3
FGD4-208ENST00000494977 KCNMB3Q9NPA1 279 aa6.95□□□□□ -1.3
FGD4-208ENST00000494977 PRELID1Q9Y255 219 aa6.95□□□□□ -1.3
FGD4-208ENST00000494977 CARD8Q9Y2G2 431 aa6.95□□□□□ -1.3
FGD4-208ENST00000494977 DYTNA2CJ06 578 aa6.94□□□□□ -1.3
FGD4-208ENST00000494977 ACTN4O43707 911 aaKnown RBP6.94□□□□□ -1.3
FGD4-208ENST00000494977 S100A1P23297 94 aa6.94□□□□□ -1.3
FGD4-208ENST00000494977 TCF7P36402 384 aaPredicted RBP6.94□□□□□ -1.3
FGD4-208ENST00000494977 MTHFSP49914 203 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms