RNA–Protein interactions for RNA: ENST00000494934.5

SRRM1-218, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 3

Gene SRRM1, Length 802 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-218ENST00000494934 TMC3Q7Z5M5 1100 aa7.58□□□□□ -1.2
SRRM1-218ENST00000494934 RNF180Q86T96 592 aa7.58□□□□□ -1.2
SRRM1-218ENST00000494934 SLC7A14Q8TBB6 771 aa7.58□□□□□ -1.2
SRRM1-218ENST00000494934 RCC1LQ96I51 464 aaKnown RBP7.58□□□□□ -1.2
SRRM1-218ENST00000494934 MRPL4Q9BYD3 311 aaKnown RBP7.58□□□□□ -1.2
SRRM1-218ENST00000494934 TMX1Q9H3N1 280 aa7.58□□□□□ -1.2
SRRM1-218ENST00000494934 GFOD1Q9NXC2 390 aa7.58□□□□□ -1.2
SRRM1-218ENST00000494934 GTF2IRD1Q9UHL9 959 aa7.58□□□□□ -1.2
SRRM1-218ENST00000494934 FBXL21Q9UKT6 434 aa7.58□□□□□ -1.2
SRRM1-218ENST00000494934 TPX2Q9ULW0 747 aaKnown RBP7.58□□□□□ -1.2
SRRM1-218ENST00000494934 AKT3Q9Y243 479 aa7.58□□□□□ -1.2
SRRM1-218ENST00000494934 FHOD1Q9Y613 1164 aa7.58□□□□□ -1.2
SRRM1-218ENST00000494934 PDE8AO60658 829 aa7.57□□□□□ -1.2
SRRM1-218ENST00000494934 DNAJC8O75937 253 aaPredicted RBP7.57□□□□□ -1.2
SRRM1-218ENST00000494934 SPINK2P20155 84 aa7.57□□□□□ -1.2
SRRM1-218ENST00000494934 TNK2Q07912 1038 aa7.57□□□□□ -1.2
SRRM1-218ENST00000494934 NTRK3Q16288 839 aa7.57□□□□□ -1.2
SRRM1-218ENST00000494934 GTF2IRD2BQ6EKJ0 949 aa7.57□□□□□ -1.2
SRRM1-218ENST00000494934 GTF2IRD2Q86UP8 949 aa7.57□□□□□ -1.2
SRRM1-218ENST00000494934 SCUBE1Q8IWY4 988 aa7.57□□□□□ -1.2
SRRM1-218ENST00000494934 FIBCD1Q8N539 461 aa7.57□□□□□ -1.2
SRRM1-218ENST00000494934 UBR7Q8N806 425 aa7.57□□□□□ -1.2
SRRM1-218ENST00000494934 C1orf159Q96HA4 380 aa7.57□□□□□ -1.2
SRRM1-218ENST00000494934 TARS2Q9BW92 718 aaKnown RBP7.57□□□□□ -1.2
SRRM1-218ENST00000494934 TRIM39Q9HCM9 518 aa7.57□□□□□ -1.2
SRRM1-218ENST00000494934 DDX56Q9NY93 547 aaKnown RBP7.57□□□□□ -1.2
SRRM1-218ENST00000494934 ST14Q9Y5Y6 855 aa7.57□□□□□ -1.2
SRRM1-218ENST00000494934 KIAA1324LA8MWY0 1029 aaPredicted RBP7.56□□□□□ -1.2
SRRM1-218ENST00000494934 ADAMTS4O75173 837 aa7.56□□□□□ -1.2
SRRM1-218ENST00000494934 CBX7O95931 251 aa7.56□□□□□ -1.2
SRRM1-218ENST00000494934 CEACAM5P06731 702 aa7.56□□□□□ -1.2
SRRM1-218ENST00000494934 GFRA1P56159 465 aa7.56□□□□□ -1.2
SRRM1-218ENST00000494934 PRSS53Q2L4Q9 553 aa7.56□□□□□ -1.2
SRRM1-218ENST00000494934 TRIM61Q5EBN2 209 aa7.56□□□□□ -1.2
SRRM1-218ENST00000494934 SYTL5Q8TDW5 730 aaPredicted RBP7.56□□□□□ -1.2
SRRM1-218ENST00000494934 ZDHHC15Q96MV8 337 aa7.56□□□□□ -1.2
SRRM1-218ENST00000494934 SLC52A2Q9HAB3 445 aa7.56□□□□□ -1.2
SRRM1-218ENST00000494934 SFMBT1Q9UHJ3 866 aa7.56□□□□□ -1.2
SRRM1-218ENST00000494934 SHISA3A0PJX4 238 aa7.55□□□□□ -1.2
SRRM1-218ENST00000494934 H0Y8X5 98 aa7.55□□□□□ -1.2
SRRM1-218ENST00000494934 NOP56O00567 594 aaKnown RBP7.55□□□□□ -1.2
SRRM1-218ENST00000494934 CNGA1P29973 690 aa7.55□□□□□ -1.2
SRRM1-218ENST00000494934 SSTR4P31391 388 aa7.55□□□□□ -1.2
SRRM1-218ENST00000494934 EVA1CP58658 441 aa7.55□□□□□ -1.2
SRRM1-218ENST00000494934 BRAPQ7Z569 592 aa7.55□□□□□ -1.2
SRRM1-218ENST00000494934 FGD2Q7Z6J4 655 aa7.55□□□□□ -1.2
SRRM1-218ENST00000494934 DTX1Q86Y01 620 aa7.55□□□□□ -1.2
SRRM1-218ENST00000494934 PRPF38AQ8NAV1 312 aaKnown RBP7.55□□□□□ -1.2
SRRM1-218ENST00000494934 DTWD2Q8NBA8 298 aa7.55□□□□□ -1.2
SRRM1-218ENST00000494934 TMEM145Q8NBT3 493 aa7.55□□□□□ -1.2
SRRM1-218ENST00000494934 CHAC2Q8WUX2 184 aa7.55□□□□□ -1.2
SRRM1-218ENST00000494934 MCMBPQ9BTE3 642 aa7.55□□□□□ -1.2
SRRM1-218ENST00000494934 GPR55Q9Y2T6 319 aaPredicted RBP7.55□□□□□ -1.2
SRRM1-218ENST00000494934 A0A087WZG4 1122 aa7.54□□□□□ -1.2
SRRM1-218ENST00000494934 WASH4PA8MWX3 477 aa7.54□□□□□ -1.2
SRRM1-218ENST00000494934 MEIS1O00470 390 aa7.54□□□□□ -1.2
SRRM1-218ENST00000494934 COBLO75128 1261 aa7.54□□□□□ -1.2
SRRM1-218ENST00000494934 VAMP4O75379 141 aa7.54□□□□□ -1.2
SRRM1-218ENST00000494934 SRFP11831 508 aa7.54□□□□□ -1.2
SRRM1-218ENST00000494934 ITIH2P19823 946 aa7.54□□□□□ -1.2
SRRM1-218ENST00000494934 CTSKP43235 329 aa7.54□□□□□ -1.2
SRRM1-218ENST00000494934 NOL9Q5SY16 702 aaKnown RBP7.54□□□□□ -1.2
SRRM1-218ENST00000494934 DENND5AQ6IQ26 1287 aa7.54□□□□□ -1.2
SRRM1-218ENST00000494934 LRRTM3Q86VH5 581 aa7.54□□□□□ -1.2
SRRM1-218ENST00000494934 MFSD4AQ8N468 514 aa7.54□□□□□ -1.2
SRRM1-218ENST00000494934 GSTCDQ8NEC7 633 aa7.54□□□□□ -1.2
SRRM1-218ENST00000494934 NETO1Q8TDF5 533 aa7.54□□□□□ -1.2
SRRM1-218ENST00000494934 COX4I2Q96KJ9 171 aa7.54□□□□□ -1.2
SRRM1-218ENST00000494934 DUSP15Q9H1R2 295 aaPredicted RBP7.54□□□□□ -1.2
SRRM1-218ENST00000494934 NKX2-4Q9H2Z4 354 aa7.54□□□□□ -1.2
SRRM1-218ENST00000494934 SEMA3GQ9NS98 782 aa7.54□□□□□ -1.2
SRRM1-218ENST00000494934 NDOR1Q9UHB4 597 aa7.54□□□□□ -1.2
SRRM1-218ENST00000494934 ASXL2Q76L83 1435 aa7.53□□□□□ -1.2
SRRM1-218ENST00000494934 DNAJC25-GNG10A0A024R161 153 aa7.53□□□□□ -1.2
SRRM1-218ENST00000494934 SIGLEC6O43699 453 aa7.53□□□□□ -1.2
SRRM1-218ENST00000494934 MARCH6O60337 910 aa7.53□□□□□ -1.2
SRRM1-218ENST00000494934 PRAMEF1O95521 474 aa7.53□□□□□ -1.2
SRRM1-218ENST00000494934 KIR3DL1P43629 444 aa7.53□□□□□ -1.2
SRRM1-218ENST00000494934 GRB10Q13322 594 aa7.53□□□□□ -1.2
SRRM1-218ENST00000494934 ZNF460Q14592 562 aa7.53□□□□□ -1.2
SRRM1-218ENST00000494934 SLC35F1Q5T1Q4 408 aa7.53□□□□□ -1.2
SRRM1-218ENST00000494934 CNNM4Q6P4Q7 775 aa7.53□□□□□ -1.2
SRRM1-218ENST00000494934 INTS5Q6P9B9 1019 aaKnown RBP7.53□□□□□ -1.2
SRRM1-218ENST00000494934 POMZP3Q6PJE2 187 aa7.53□□□□□ -1.2
SRRM1-218ENST00000494934 CRACR2BQ8N4Y2 399 aaPredicted RBP7.53□□□□□ -1.2
SRRM1-218ENST00000494934 SCLYQ96I15 445 aa7.53□□□□□ -1.2
SRRM1-218ENST00000494934 IPO9Q96P70 1041 aaKnown RBP7.53□□□□□ -1.2
SRRM1-218ENST00000494934 IRF2BPLQ9H1B7 796 aa7.53□□□□□ -1.2
SRRM1-218ENST00000494934 CAAP1Q9H8G2 361 aa7.53□□□□□ -1.2
SRRM1-218ENST00000494934 PRR13Q9NZ81 148 aa7.53□□□□□ -1.2
SRRM1-218ENST00000494934 ATP8A1Q9Y2Q0 1164 aa7.53□□□□□ -1.2
SRRM1-218ENST00000494934 LOC101059915A0A1B0GWI6 518 aaPredicted RBP7.52□□□□□ -1.21
SRRM1-218ENST00000494934 PRNPP04156 253 aa7.52□□□□□ -1.21
SRRM1-218ENST00000494934 SNRPB2P08579 225 aaKnown RBP7.52□□□□□ -1.21
SRRM1-218ENST00000494934 CYP7A1P22680 504 aa7.52□□□□□ -1.21
SRRM1-218ENST00000494934 MAP4K2Q12851 820 aa7.52□□□□□ -1.21
SRRM1-218ENST00000494934 IFI16Q16666 785 aaKnown RBP7.52□□□□□ -1.21
SRRM1-218ENST00000494934 DPY19L1Q2PZI1 675 aa7.52□□□□□ -1.21
SRRM1-218ENST00000494934 ZMYM1Q5SVZ6 1142 aa7.52□□□□□ -1.21
SRRM1-218ENST00000494934 CRTC3Q6UUV7 619 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms