RNA–Protein interactions for RNA: ENST00000494667.5

PRKD3-210, Transcript of protein kinase D3, humanhuman

TSL 1 (best)

Gene PRKD3, Length 4,326 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD3-210ENST00000494667 GNAZP19086 355 aa5.33□□□□□ -1.56
PRKD3-210ENST00000494667 PIP4K2AP48426 406 aaPredicted RBP5.33□□□□□ -1.56
PRKD3-210ENST00000494667 ATP2B2Q01814 1243 aa5.33□□□□□ -1.56
PRKD3-210ENST00000494667 STK3Q13188 491 aa5.33□□□□□ -1.56
PRKD3-210ENST00000494667 LONRF3Q496Y0 759 aa5.33□□□□□ -1.56
PRKD3-210ENST00000494667 SLC9C2Q5TAH2 1124 aa5.33□□□□□ -1.56
PRKD3-210ENST00000494667 IRGQQ8WZA9 623 aa5.33□□□□□ -1.56
PRKD3-210ENST00000494667 NEUROD6Q96NK8 337 aa5.33□□□□□ -1.56
PRKD3-210ENST00000494667 RUFY1Q96T51 708 aa5.33□□□□□ -1.56
PRKD3-210ENST00000494667 SDAD1Q9NVU7 687 aaKnown RBP eCLIP5.33□□□□□ -1.56
PRKD3-210ENST00000494667 CAPN11Q9UMQ6 739 aa5.33□□□□□ -1.56
PRKD3-210ENST00000494667 KIF13BQ9NQT8 1826 aa5.33□□□□□ -1.56
PRKD3-210ENST00000494667 WNT7AO00755 349 aa5.33□□□□□ -1.56
PRKD3-210ENST00000494667 TRIM37O94972 964 aa5.33□□□□□ -1.56
PRKD3-210ENST00000494667 ABL1P00519 1130 aa5.33□□□□□ -1.56
PRKD3-210ENST00000494667 TFRCP02786 760 aaKnown RBP5.33□□□□□ -1.56
PRKD3-210ENST00000494667 PTPREP23469 700 aa5.33□□□□□ -1.56
PRKD3-210ENST00000494667 GNAQP50148 359 aa5.33□□□□□ -1.56
PRKD3-210ENST00000494667 CEBPZQ03701 1054 aaKnown RBP5.33□□□□□ -1.56
PRKD3-210ENST00000494667 PABPC4Q13310 644 aaKnown RBP eCLIP5.33□□□□□ -1.56
PRKD3-210ENST00000494667 CUL3Q13618 768 aa5.33□□□□□ -1.56
PRKD3-210ENST00000494667 MCMDC2Q4G0Z9 681 aa5.33□□□□□ -1.56
PRKD3-210ENST00000494667 RNF187Q5TA31 235 aaPredicted RBP5.33□□□□□ -1.56
PRKD3-210ENST00000494667 MCM10Q7L590 875 aa5.33□□□□□ -1.56
PRKD3-210ENST00000494667 IFT20Q8IY31 132 aa5.33□□□□□ -1.56
PRKD3-210ENST00000494667 SPATA4Q8NEY3 305 aa5.33□□□□□ -1.56
PRKD3-210ENST00000494667 TLCD1Q96CP7 247 aa5.33□□□□□ -1.56
PRKD3-210ENST00000494667 C8orf76Q96K31 380 aa5.33□□□□□ -1.56
PRKD3-210ENST00000494667 GDAP1L1Q96MZ0 367 aa5.33□□□□□ -1.56
PRKD3-210ENST00000494667 ZNF317Q96PQ6 595 aaPredicted RBP5.33□□□□□ -1.56
PRKD3-210ENST00000494667 TSC22D3Q99576 134 aa5.33□□□□□ -1.56
PRKD3-210ENST00000494667 FAM192AQ9GZU8 254 aa5.33□□□□□ -1.56
PRKD3-210ENST00000494667 HPS5Q9UPZ3 1129 aa5.33□□□□□ -1.56
PRKD3-210ENST00000494667 PYGBP11216 843 aa5.33□□□□□ -1.56
PRKD3-210ENST00000494667 ACADSP16219 412 aa5.33□□□□□ -1.56
PRKD3-210ENST00000494667 ABCD1P33897 745 aa5.33□□□□□ -1.56
PRKD3-210ENST00000494667 GUCY1A3Q02108 690 aa5.33□□□□□ -1.56
PRKD3-210ENST00000494667 HHATQ5VTY9 493 aa5.33□□□□□ -1.56
PRKD3-210ENST00000494667 MSL1Q68DK7 614 aa5.33□□□□□ -1.56
PRKD3-210ENST00000494667 CC2D2BQ6DHV5 1058 aa5.33□□□□□ -1.56
PRKD3-210ENST00000494667 ASRGL1Q7L266 308 aa5.33□□□□□ -1.56
PRKD3-210ENST00000494667 ENDOVQ8N8Q3 282 aaKnown RBP5.33□□□□□ -1.56
PRKD3-210ENST00000494667 GBP7Q8N8V2 638 aaPredicted RBP5.33□□□□□ -1.56
PRKD3-210ENST00000494667 COG3Q96JB2 828 aa5.33□□□□□ -1.56
PRKD3-210ENST00000494667 AGAP3Q96P47 875 aa5.33□□□□□ -1.56
PRKD3-210ENST00000494667 GSDMAQ96QA5 445 aa5.33□□□□□ -1.56
PRKD3-210ENST00000494667 SLF1Q9BQI6 1058 aa5.33□□□□□ -1.56
PRKD3-210ENST00000494667 ZNHIT6Q9NWK9 470 aaKnown RBP5.33□□□□□ -1.56
PRKD3-210ENST00000494667 SYNRGQ9UMZ2 1314 aa5.32□□□□□ -1.56
PRKD3-210ENST00000494667 F8W031 263 aaPredicted RBP5.32□□□□□ -1.56
PRKD3-210ENST00000494667 MYO1EQ12965 1108 aa5.32□□□□□ -1.56
PRKD3-210ENST00000494667 PSMD2Q13200 908 aa5.32□□□□□ -1.56
PRKD3-210ENST00000494667 SPDYAQ5MJ70 313 aa5.32□□□□□ -1.56
PRKD3-210ENST00000494667 ERMARDQ5T6L9 678 aa5.32□□□□□ -1.56
PRKD3-210ENST00000494667 GKAP1Q5VSY0 366 aaPredicted RBP5.32□□□□□ -1.56
PRKD3-210ENST00000494667 ZNF507Q8TCN5 953 aa5.32□□□□□ -1.56
PRKD3-210ENST00000494667 HDAC7Q8WUI4 952 aa5.32□□□□□ -1.56
PRKD3-210ENST00000494667 ARHGEF3Q9NR81 526 aa5.32□□□□□ -1.56
PRKD3-210ENST00000494667 SAMSN1Q9NSI8 373 aaKnown RBP5.32□□□□□ -1.56
PRKD3-210ENST00000494667 FBXO2Q9UK22 296 aaPredicted RBP5.32□□□□□ -1.56
PRKD3-210ENST00000494667 TMEM59LQ9UK28 342 aa5.32□□□□□ -1.56
PRKD3-210ENST00000494667 TJP1Q07157 1748 aa5.32□□□□□ -1.56
PRKD3-210ENST00000494667 PPP1R3GB7ZBB8 358 aa5.32□□□□□ -1.56
PRKD3-210ENST00000494667 PPP1R12BO60237 982 aaPredicted RBP5.32□□□□□ -1.56
PRKD3-210ENST00000494667 THEMIS2Q5TEJ8 643 aa5.32□□□□□ -1.56
PRKD3-210ENST00000494667 RUFY4Q6ZNE9 571 aa5.32□□□□□ -1.56
PRKD3-210ENST00000494667 KRI1Q8N9T8 703 aaKnown RBP5.32□□□□□ -1.56
PRKD3-210ENST00000494667 SEC14L1Q92503 715 aa5.32□□□□□ -1.56
PRKD3-210ENST00000494667 RBM17Q96I25 401 aaKnown RBP5.32□□□□□ -1.56
PRKD3-210ENST00000494667 SCLT1Q96NL6 688 aa5.32□□□□□ -1.56
PRKD3-210ENST00000494667 HAUS7Q99871 368 aa5.32□□□□□ -1.56
PRKD3-210ENST00000494667 FAM129AQ9BZQ8 928 aa5.32□□□□□ -1.56
PRKD3-210ENST00000494667 DMGDHQ9UI17 866 aaKnown RBP5.32□□□□□ -1.56
PRKD3-210ENST00000494667 RWDD2AQ9UIY3 292 aa5.32□□□□□ -1.56
PRKD3-210ENST00000494667 TBC1D30Q9Y2I9 924 aa5.32□□□□□ -1.56
PRKD3-210ENST00000494667 PKD1L3Q7Z443 1732 aa5.32□□□□□ -1.56
PRKD3-210ENST00000494667 SOS2Q07890 1332 aaPredicted RBP5.32□□□□□ -1.56
PRKD3-210ENST00000494667 GOLGA6L10A6NI86 522 aa5.32□□□□□ -1.56
PRKD3-210ENST00000494667 NQO1P15559 274 aaKnown RBP5.32□□□□□ -1.56
PRKD3-210ENST00000494667 CCT2P78371 535 aaKnown RBP5.32□□□□□ -1.56
PRKD3-210ENST00000494667 CCDC15Q0P6D6 951 aa5.32□□□□□ -1.56
PRKD3-210ENST00000494667 TTC39AQ5SRH9 613 aa5.32□□□□□ -1.56
PRKD3-210ENST00000494667 WDR59Q6PJI9 974 aa5.32□□□□□ -1.56
PRKD3-210ENST00000494667 NFXL1Q6ZNB6 911 aa5.32□□□□□ -1.56
PRKD3-210ENST00000494667 ZNF513Q8N8E2 541 aaPredicted RBP5.32□□□□□ -1.56
PRKD3-210ENST00000494667 CCDC63Q8NA47 563 aa5.32□□□□□ -1.56
PRKD3-210ENST00000494667 AGAP11Q8TF27 550 aa5.32□□□□□ -1.56
PRKD3-210ENST00000494667 PPIL4Q8WUA2 492 aaKnown RBP eCLIP5.32□□□□□ -1.56
PRKD3-210ENST00000494667 EAF2Q96CJ1 260 aaPredicted RBP5.32□□□□□ -1.56
PRKD3-210ENST00000494667 TBC1D31Q96DN5 1066 aa5.32□□□□□ -1.56
PRKD3-210ENST00000494667 LRRC1Q9BTT6 524 aa5.32□□□□□ -1.56
PRKD3-210ENST00000494667 SIL1Q9H173 461 aa5.32□□□□□ -1.56
PRKD3-210ENST00000494667 DMAP1Q9NPF5 467 aaPredicted RBP5.32□□□□□ -1.56
PRKD3-210ENST00000494667 ZNF510Q9Y2H8 683 aa5.32□□□□□ -1.56
PRKD3-210ENST00000494667 HYOU1Q9Y4L1 999 aa5.32□□□□□ -1.56
PRKD3-210ENST00000494667 SETD1BQ9UPS6 1966 aaKnown RBP5.32□□□□□ -1.56
PRKD3-210ENST00000494667 E7EVH7 732 aa5.32□□□□□ -1.56
PRKD3-210ENST00000494667 OPLAHO14841 1288 aa5.32□□□□□ -1.56
PRKD3-210ENST00000494667 GNAT1P11488 350 aa5.32□□□□□ -1.56
PRKD3-210ENST00000494667 CCNB1P14635 433 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms