RNA–Protein interactions for RNA: ENST00000494569.5

ZIC4-216, Transcript of Zic family member 4, humanhuman

TSL 2

Gene ZIC4, Length 3,317 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC4-216ENST00000494569 CCDC17Q96LX7 622 aa12.54□□□□□ -0.4
ZIC4-216ENST00000494569 FAM13BQ9NYF5 915 aa12.54□□□□□ -0.4
ZIC4-216ENST00000494569 IKBKBO14920 756 aa12.54□□□□□ -0.4
ZIC4-216ENST00000494569 FOXN1O15353 648 aa12.54□□□□□ -0.4
ZIC4-216ENST00000494569 C21orf2O43822 256 aa12.54□□□□□ -0.4
ZIC4-216ENST00000494569 ZNF543Q08ER8 600 aa12.54□□□□□ -0.4
ZIC4-216ENST00000494569 PNOCQ13519 176 aa12.54□□□□□ -0.4
ZIC4-216ENST00000494569 CCDC93Q567U6 631 aa12.54□□□□□ -0.4
ZIC4-216ENST00000494569 MTMR14Q8NCE2 650 aa12.54□□□□□ -0.4
ZIC4-216ENST00000494569 CCDC148Q8NFR7 591 aa12.54□□□□□ -0.4
ZIC4-216ENST00000494569 PGAP2Q9UHJ9 254 aa12.54□□□□□ -0.4
ZIC4-216ENST00000494569 SLC34A2O95436 690 aa12.54□□□□□ -0.4
ZIC4-216ENST00000494569 SPECC1Q5M775 1068 aa12.54□□□□□ -0.4
ZIC4-216ENST00000494569 PIK3AP1Q6ZUJ8 805 aa12.54□□□□□ -0.4
ZIC4-216ENST00000494569 PDCL3Q9H2J4 239 aa12.54□□□□□ -0.4
ZIC4-216ENST00000494569 PYCARDQ9ULZ3 195 aa12.54□□□□□ -0.4
ZIC4-216ENST00000494569 PRR29P0C7W0 189 aa12.53□□□□□ -0.4
ZIC4-216ENST00000494569 SLURP2P0DP57 97 aa12.53□□□□□ -0.4
ZIC4-216ENST00000494569 CLK2P49760 499 aaKnown RBP12.53□□□□□ -0.4
ZIC4-216ENST00000494569 PTGDRQ13258 359 aa12.53□□□□□ -0.4
ZIC4-216ENST00000494569 MORC3Q14149 939 aa12.53□□□□□ -0.4
ZIC4-216ENST00000494569 RSBN1LQ6PCB5 846 aaPredicted RBP12.53□□□□□ -0.4
ZIC4-216ENST00000494569 APTXQ7Z2E3 356 aaKnown RBP12.53□□□□□ -0.4
ZIC4-216ENST00000494569 CEP57L1Q8IYX8 460 aa12.53□□□□□ -0.4
ZIC4-216ENST00000494569 NYAP2Q9P242 653 aa12.53□□□□□ -0.4
ZIC4-216ENST00000494569 SERTAD1Q9UHV2 236 aa12.53□□□□□ -0.4
ZIC4-216ENST00000494569 PHIPQ8WWQ0 1821 aa12.53□□□□□ -0.4
ZIC4-216ENST00000494569 TSC1Q92574 1164 aa12.53□□□□□ -0.4
ZIC4-216ENST00000494569 CPVLQ9H3G5 476 aa12.53□□□□□ -0.4
ZIC4-216ENST00000494569 PI4KBQ9UBF8 816 aa12.53□□□□□ -0.4
ZIC4-216ENST00000494569 PASKQ96RG2 1323 aa12.53□□□□□ -0.4
ZIC4-216ENST00000494569 PPP1R11O60927 126 aaPredicted RBP12.52□□□□□ -0.4
ZIC4-216ENST00000494569 HLA-DOAP06340 250 aa12.52□□□□□ -0.4
ZIC4-216ENST00000494569 GTF2F1P35269 517 aaKnown RBP eCLIP12.52□□□□□ -0.4
ZIC4-216ENST00000494569 NOLC1Q14978 699 aaKnown RBP eCLIP12.52□□□□□ -0.4
ZIC4-216ENST00000494569 ZNF174Q15697 407 aa12.52□□□□□ -0.4
ZIC4-216ENST00000494569 PPP1R18Q6NYC8 613 aa12.52□□□□□ -0.4
ZIC4-216ENST00000494569 POLR2DO15514 142 aaKnown RBP12.52□□□□□ -0.41
ZIC4-216ENST00000494569 SOGA3Q5TF21 947 aa12.52□□□□□ -0.41
ZIC4-216ENST00000494569 PDXDC2PQ6P474 469 aa12.52□□□□□ -0.41
ZIC4-216ENST00000494569 CLEC10AQ8IUN9 316 aa12.52□□□□□ -0.41
ZIC4-216ENST00000494569 SYMPKQ92797 1274 aaKnown RBP12.52□□□□□ -0.41
ZIC4-216ENST00000494569 EPSTI1Q96J88 318 aa12.52□□□□□ -0.41
ZIC4-216ENST00000494569 PRMT6Q96LA8 375 aaPredicted RBP12.52□□□□□ -0.41
ZIC4-216ENST00000494569 PIGSQ96S52 555 aa12.52□□□□□ -0.41
ZIC4-216ENST00000494569 JMJD4Q9H9V9 463 aa12.52□□□□□ -0.41
ZIC4-216ENST00000494569 SYNPO2Q9UMS6 1093 aa12.52□□□□□ -0.41
ZIC4-216ENST00000494569 PCDHA5Q9Y5H7 936 aa12.52□□□□□ -0.41
ZIC4-216ENST00000494569 BAZ2BQ9UIF8 2168 aaKnown RBP12.52□□□□□ -0.41
ZIC4-216ENST00000494569 ZNF18P17022 549 aa12.52□□□□□ -0.41
ZIC4-216ENST00000494569 PRPHP41219 470 aa12.52□□□□□ -0.41
ZIC4-216ENST00000494569 JAG1P78504 1218 aa12.52□□□□□ -0.41
ZIC4-216ENST00000494569 ORC2Q13416 577 aaPredicted RBP12.52□□□□□ -0.41
ZIC4-216ENST00000494569 RRP1BQ14684 758 aaKnown RBP12.52□□□□□ -0.41
ZIC4-216ENST00000494569 POSTNQ15063 836 aa12.52□□□□□ -0.41
ZIC4-216ENST00000494569 CFAP100Q494V2 611 aa12.52□□□□□ -0.41
ZIC4-216ENST00000494569 PPP4R3BQ5MIZ7 849 aa12.52□□□□□ -0.41
ZIC4-216ENST00000494569 RRP36Q96EU6 259 aaKnown RBP12.52□□□□□ -0.41
ZIC4-216ENST00000494569 L3MBTL3Q96JM7 780 aaPredicted RBP12.52□□□□□ -0.41
ZIC4-216ENST00000494569 THSD7BQ9C0I4 1608 aa12.52□□□□□ -0.41
ZIC4-216ENST00000494569 INTS13Q9NVM9 706 aa12.52□□□□□ -0.41
ZIC4-216ENST00000494569 NRBP1Q9UHY1 535 aa12.52□□□□□ -0.41
ZIC4-216ENST00000494569 MAN1B1Q9UKM7 699 aa12.52□□□□□ -0.41
ZIC4-216ENST00000494569 G3V3G9 751 aa12.51□□□□□ -0.41
ZIC4-216ENST00000494569 PPIP5K2O43314 1243 aa12.51□□□□□ -0.41
ZIC4-216ENST00000494569 SLFN14P0C7P3 912 aa12.51□□□□□ -0.41
ZIC4-216ENST00000494569 CCZ1BP86790 482 aa12.51□□□□□ -0.41
ZIC4-216ENST00000494569 CCZ1P86791 482 aaPredicted RBP12.51□□□□□ -0.41
ZIC4-216ENST00000494569 SHROOM1Q2M3G4 852 aaPredicted RBP12.51□□□□□ -0.41
ZIC4-216ENST00000494569 DCAF8Q5TAQ9 597 aa12.51□□□□□ -0.41
ZIC4-216ENST00000494569 AOPEPQ8N6M6 819 aa12.51□□□□□ -0.41
ZIC4-216ENST00000494569 TRIML1Q8N9V2 468 aa12.51□□□□□ -0.41
ZIC4-216ENST00000494569 CNNM3Q8NE01 707 aa12.51□□□□□ -0.41
ZIC4-216ENST00000494569 MTRQ99707 1265 aa12.51□□□□□ -0.41
ZIC4-216ENST00000494569 NAT10Q9H0A0 1025 aaKnown RBP12.51□□□□□ -0.41
ZIC4-216ENST00000494569 SPDYE2BA6NHP3 402 aa12.51□□□□□ -0.41
ZIC4-216ENST00000494569 SPDYE6P0CI01 402 aa12.51□□□□□ -0.41
ZIC4-216ENST00000494569 CACNB3P54284 484 aa12.51□□□□□ -0.41
ZIC4-216ENST00000494569 KANK3Q6NY19 840 aa12.51□□□□□ -0.41
ZIC4-216ENST00000494569 RASGRP4Q8TDF6 673 aa12.51□□□□□ -0.41
ZIC4-216ENST00000494569 LRRC15Q8TF66 581 aa12.51□□□□□ -0.41
ZIC4-216ENST00000494569 TMX1Q9H3N1 280 aa12.51□□□□□ -0.41
ZIC4-216ENST00000494569 CLIP2Q9UDT6 1046 aa12.51□□□□□ -0.41
ZIC4-216ENST00000494569 LAD1O00515 517 aa12.5□□□□□ -0.41
ZIC4-216ENST00000494569 LONP1P36776 959 aaKnown RBP12.5□□□□□ -0.41
ZIC4-216ENST00000494569 CTCFP49711 727 aaPredicted RBP12.5□□□□□ -0.41
ZIC4-216ENST00000494569 MAP3K10Q02779 954 aa12.5□□□□□ -0.41
ZIC4-216ENST00000494569 DPYDQ12882 1025 aa12.5□□□□□ -0.41
ZIC4-216ENST00000494569 HEATR3Q7Z4Q2 680 aa12.5□□□□□ -0.41
ZIC4-216ENST00000494569 LRRC47Q8N1G4 583 aaKnown RBP12.5□□□□□ -0.41
ZIC4-216ENST00000494569 SPC24Q8NBT2 197 aa12.5□□□□□ -0.41
ZIC4-216ENST00000494569 GMCL1P1Q8NEA9 526 aa12.5□□□□□ -0.41
ZIC4-216ENST00000494569 ZNF219Q9P2Y4 722 aaPredicted RBP12.5□□□□□ -0.41
ZIC4-216ENST00000494569 PRDM4Q9UKN5 801 aa12.5□□□□□ -0.41
ZIC4-216ENST00000494569 TPM3P06753 285 aa12.5□□□□□ -0.41
ZIC4-216ENST00000494569 LDHDQ86WU2 507 aa12.5□□□□□ -0.41
ZIC4-216ENST00000494569 PAGE5Q96GU1 130 aa12.5□□□□□ -0.41
ZIC4-216ENST00000494569 IQCA1LA6NCM1 817 aa12.5□□□□□ -0.41
ZIC4-216ENST00000494569 PSMD14O00487 310 aa12.5□□□□□ -0.41
ZIC4-216ENST00000494569 CT47A1Q5JQC4 288 aaPredicted RBP12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms