RNA–Protein interactions for RNA: ENST00000494446.1

FN1-225, Transcript of fibronectin 1, humanhuman

TSL 2

Gene FN1, Length 676 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-225ENST00000494446 HERC6Q8IVU3 1022 aa8.33□□□□□ -1.08
FN1-225ENST00000494446 SPICE1Q8N0Z3 855 aa8.33□□□□□ -1.08
FN1-225ENST00000494446 SLC43A3Q8NBI5 491 aa8.33□□□□□ -1.08
FN1-225ENST00000494446 AGBL1Q96MI9 1066 aa8.33□□□□□ -1.08
FN1-225ENST00000494446 SLC9A7Q96T83 725 aa8.33□□□□□ -1.08
FN1-225ENST00000494446 SNRKQ9NRH2 765 aa8.33□□□□□ -1.08
FN1-225ENST00000494446 FAM86C1Q9NVL1 165 aa8.33□□□□□ -1.08
FN1-225ENST00000494446 LMCD1Q9NZU5 365 aa8.33□□□□□ -1.08
FN1-225ENST00000494446 MTUS1Q9ULD2 1270 aa8.33□□□□□ -1.08
FN1-225ENST00000494446 NLRC5Q86WI3 1866 aa8.32□□□□□ -1.08
FN1-225ENST00000494446 B4GALT4O60513 344 aa8.32□□□□□ -1.08
FN1-225ENST00000494446 PFKMP08237 780 aa8.32□□□□□ -1.08
FN1-225ENST00000494446 UBTFL1P0CB47 393 aaPredicted RBP8.32□□□□□ -1.08
FN1-225ENST00000494446 SHMT1P34896 483 aa8.32□□□□□ -1.08
FN1-225ENST00000494446 STAT3P40763 770 aa8.32□□□□□ -1.08
FN1-225ENST00000494446 MCAMP43121 646 aa8.32□□□□□ -1.08
FN1-225ENST00000494446 NOL8Q76FK4 1167 aaKnown RBP8.32□□□□□ -1.08
FN1-225ENST00000494446 TTC6Q86TZ1 520 aa8.32□□□□□ -1.08
FN1-225ENST00000494446 RIOX2Q8IUF8 465 aa8.32□□□□□ -1.08
FN1-225ENST00000494446 WDR63Q8IWG1 891 aa8.32□□□□□ -1.08
FN1-225ENST00000494446 MSL3Q8N5Y2 521 aaKnown RBP8.32□□□□□ -1.08
FN1-225ENST00000494446 PHOSPHO2Q8TCD6 241 aa8.32□□□□□ -1.08
FN1-225ENST00000494446 DDX11Q96FC9 970 aa8.32□□□□□ -1.08
FN1-225ENST00000494446 UPF3BQ9BZI7 483 aaKnown RBP8.32□□□□□ -1.08
FN1-225ENST00000494446 FTOQ9C0B1 505 aaKnown RBP eCLIP8.32□□□□□ -1.08
FN1-225ENST00000494446 EHD4Q9H223 541 aa8.32□□□□□ -1.08
FN1-225ENST00000494446 EPG5Q9HCE0 2579 aa8.31□□□□□ -1.08
FN1-225ENST00000494446 LCHNA4D1U4 455 aa8.31□□□□□ -1.08
FN1-225ENST00000494446 H3BQ06 376 aaPredicted RBP8.31□□□□□ -1.08
FN1-225ENST00000494446 CTAGE5O15320 804 aa8.31□□□□□ -1.08
FN1-225ENST00000494446 ARID4AP29374 1257 aaPredicted RBP8.31□□□□□ -1.08
FN1-225ENST00000494446 SLC4A3P48751 1232 aa8.31□□□□□ -1.08
FN1-225ENST00000494446 PSMC6P62333 389 aa8.31□□□□□ -1.08
FN1-225ENST00000494446 PUS10Q3MIT2 529 aaKnown RBP8.31□□□□□ -1.08
FN1-225ENST00000494446 POTEGQ6S5H5 508 aa8.31□□□□□ -1.08
FN1-225ENST00000494446 EP400NLQ6ZTU2 488 aa8.31□□□□□ -1.08
FN1-225ENST00000494446 ZBED2Q9BTP6 218 aa8.31□□□□□ -1.08
FN1-225ENST00000494446 COPRSQ9NQ92 184 aa8.31□□□□□ -1.08
FN1-225ENST00000494446 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.31□□□□□ -1.08
FN1-225ENST00000494446 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.31□□□□□ -1.08
FN1-225ENST00000494446 ATG2AQ2TAZ0 1938 aa8.31□□□□□ -1.08
FN1-225ENST00000494446 BAZ2AQ9UIF9 1905 aaKnown RBP8.31□□□□□ -1.08
FN1-225ENST00000494446 GRIN2DO15399 1336 aa8.3□□□□□ -1.08
FN1-225ENST00000494446 KMT2BQ9UMN6 2715 aaPredicted RBP8.3□□□□□ -1.08
FN1-225ENST00000494446 CABYRO75952 493 aa8.3□□□□□ -1.08
FN1-225ENST00000494446 UQCRFS1P1P0C7P4 283 aa8.3□□□□□ -1.08
FN1-225ENST00000494446 CYP2C9P11712 490 aa8.3□□□□□ -1.08
FN1-225ENST00000494446 CYP7A1P22680 504 aa8.3□□□□□ -1.08
FN1-225ENST00000494446 IRS1P35568 1242 aa8.3□□□□□ -1.08
FN1-225ENST00000494446 PLCD1P51178 756 aa8.3□□□□□ -1.08
FN1-225ENST00000494446 ZP2Q05996 745 aa8.3□□□□□ -1.08
FN1-225ENST00000494446 TCF15Q12870 199 aa8.3□□□□□ -1.08
FN1-225ENST00000494446 MAMDC4Q6UXC1 1216 aa8.3□□□□□ -1.08
FN1-225ENST00000494446 ERMP1Q7Z2K6 904 aa8.3□□□□□ -1.08
FN1-225ENST00000494446 MRPL50Q8N5N7 158 aaKnown RBP8.3□□□□□ -1.08
FN1-225ENST00000494446 MIGA1Q8NAN2 632 aa8.3□□□□□ -1.08
FN1-225ENST00000494446 PBXIP1Q96AQ6 731 aa8.3□□□□□ -1.08
FN1-225ENST00000494446 PRRX2Q99811 253 aa8.3□□□□□ -1.08
FN1-225ENST00000494446 ABHD16BQ9H3Z7 469 aa8.3□□□□□ -1.08
FN1-225ENST00000494446 PRKRIP1Q9H875 184 aaPredicted RBP8.3□□□□□ -1.08
FN1-225ENST00000494446 SUGCTQ9HAC7 445 aa8.3□□□□□ -1.08
FN1-225ENST00000494446 FBXO28Q9NVF7 368 aa8.3□□□□□ -1.08
FN1-225ENST00000494446 PRKAG3Q9UGI9 489 aa8.3□□□□□ -1.08
FN1-225ENST00000494446 MUTYHQ9UIF7 546 aa8.3□□□□□ -1.08
FN1-225ENST00000494446 FAM50BQ9Y247 325 aa8.3□□□□□ -1.08
FN1-225ENST00000494446 PTPRCP08575 1304 aa8.29□□□□□ -1.08
FN1-225ENST00000494446 C11orf97A0A1B0GVM6 126 aaPredicted RBP8.29□□□□□ -1.08
FN1-225ENST00000494446 VWA5AO00534 786 aa8.29□□□□□ -1.08
FN1-225ENST00000494446 WDR46O15213 610 aaKnown RBP8.29□□□□□ -1.08
FN1-225ENST00000494446 POLR3DP05423 398 aaPredicted RBP8.29□□□□□ -1.08
FN1-225ENST00000494446 COPB2P35606 906 aa8.29□□□□□ -1.08
FN1-225ENST00000494446 KCNJ6P48051 423 aa8.29□□□□□ -1.08
FN1-225ENST00000494446 TNFAIP2Q03169 654 aa8.29□□□□□ -1.08
FN1-225ENST00000494446 FSCN1Q16658 493 aaKnown RBP8.29□□□□□ -1.08
FN1-225ENST00000494446 TMCO2Q7Z6W1 182 aaPredicted RBP8.29□□□□□ -1.08
FN1-225ENST00000494446 CLEC10AQ8IUN9 316 aa8.29□□□□□ -1.08
FN1-225ENST00000494446 SUGP1Q8IWZ8 645 aaKnown RBP8.29□□□□□ -1.08
FN1-225ENST00000494446 ATOH1Q92858 354 aaPredicted RBP8.29□□□□□ -1.08
FN1-225ENST00000494446 SEZ6LQ9BYH1 1024 aa8.29□□□□□ -1.08
FN1-225ENST00000494446 AP5M1Q9H0R1 490 aa8.29□□□□□ -1.08
FN1-225ENST00000494446 ARHGEF10LQ9HCE6 1279 aa8.29□□□□□ -1.08
FN1-225ENST00000494446 TRMT13Q9NUP7 481 aaKnown RBP8.29□□□□□ -1.08
FN1-225ENST00000494446 ZNF214Q9UL59 606 aaPredicted RBP8.29□□□□□ -1.08
FN1-225ENST00000494446 ADAMTS5Q9UNA0 930 aa8.29□□□□□ -1.08
FN1-225ENST00000494446 DCHS1Q96JQ0 3298 aa8.29□□□□□ -1.08
FN1-225ENST00000494446 MYH4Q9Y623 1939 aa8.29□□□□□ -1.08
FN1-225ENST00000494446 ASTN1O14525 1302 aa8.29□□□□□ -1.08
FN1-225ENST00000494446 ZNF292O60281 2723 aa8.28□□□□□ -1.08
FN1-225ENST00000494446 DNAJC25-GNG10A0A024R161 153 aa8.28□□□□□ -1.08
FN1-225ENST00000494446 DYNC1LI2O43237 492 aaPredicted RBP8.28□□□□□ -1.08
FN1-225ENST00000494446 RAD21O60216 631 aa8.28□□□□□ -1.08
FN1-225ENST00000494446 ZEB2O60315 1214 aa8.28□□□□□ -1.08
FN1-225ENST00000494446 KRT37O76014 449 aa8.28□□□□□ -1.08
FN1-225ENST00000494446 CYP2E1P05181 493 aaPredicted RBP8.28□□□□□ -1.08
FN1-225ENST00000494446 SUPT20HL2P0C7V6 817 aa8.28□□□□□ -1.08
FN1-225ENST00000494446 PTGS1P23219 599 aa8.28□□□□□ -1.08
FN1-225ENST00000494446 RFC2P35250 354 aa8.28□□□□□ -1.08
FN1-225ENST00000494446 TTC39AQ5SRH9 613 aa8.28□□□□□ -1.08
FN1-225ENST00000494446 ARMCX2Q7L311 632 aa8.28□□□□□ -1.08
FN1-225ENST00000494446 ZNF467Q7Z7K2 595 aaPredicted RBP8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms