RNA–Protein interactions for RNA: ENST00000494395.1

ITGB1-217, Transcript of integrin subunit beta 1, humanhuman

TSL 3

Gene ITGB1, Length 562 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-217ENST00000494395 GPRC5AQ8NFJ5 357 aa10.35□□□□□ -0.75
ITGB1-217ENST00000494395 ARMC5Q96C12 935 aa10.35□□□□□ -0.75
ITGB1-217ENST00000494395 ATG4CQ96DT6 458 aa10.35□□□□□ -0.75
ITGB1-217ENST00000494395 GMCL1Q96IK5 515 aa10.35□□□□□ -0.75
ITGB1-217ENST00000494395 PCMTD1Q96MG8 357 aaPredicted RBP10.35□□□□□ -0.75
ITGB1-217ENST00000494395 NUP88Q99567 741 aaPredicted RBP10.35□□□□□ -0.75
ITGB1-217ENST00000494395 PAGR1Q9BTK6 254 aa10.35□□□□□ -0.75
ITGB1-217ENST00000494395 TANGO6Q9C0B7 1094 aa10.35□□□□□ -0.75
ITGB1-217ENST00000494395 HOXC10Q9NYD6 342 aa10.35□□□□□ -0.75
ITGB1-217ENST00000494395 GJD2Q9UKL4 321 aa10.35□□□□□ -0.75
ITGB1-217ENST00000494395 B4E1Z4 1266 aa10.34□□□□□ -0.75
ITGB1-217ENST00000494395 TNPO2O14787 897 aaKnown RBP10.34□□□□□ -0.75
ITGB1-217ENST00000494395 FLOT1O75955 427 aa10.34□□□□□ -0.75
ITGB1-217ENST00000494395 HOXD10P28358 340 aa10.34□□□□□ -0.75
ITGB1-217ENST00000494395 IRF5Q13568 498 aa10.34□□□□□ -0.75
ITGB1-217ENST00000494395 RRP12Q5JTH9 1297 aaKnown RBP10.34□□□□□ -0.75
ITGB1-217ENST00000494395 STOX1Q6ZVD7 989 aa10.34□□□□□ -0.75
ITGB1-217ENST00000494395 MB21D1Q8N884 522 aa10.34□□□□□ -0.75
ITGB1-217ENST00000494395 ESR2Q92731 530 aa10.34□□□□□ -0.75
ITGB1-217ENST00000494395 USP6NLQ92738 828 aa10.34□□□□□ -0.75
ITGB1-217ENST00000494395 TOMM22Q9NS69 142 aa10.34□□□□□ -0.75
ITGB1-217ENST00000494395 PPP1R9AQ9ULJ8 1098 aa10.34□□□□□ -0.75
ITGB1-217ENST00000494395 RBM8AQ9Y5S9 174 aaKnown RBP10.34□□□□□ -0.75
ITGB1-217ENST00000494395 ZNFX1Q9P2E3 1918 aaKnown RBP10.34□□□□□ -0.75
ITGB1-217ENST00000494395 VWA5AO00534 786 aa10.33□□□□□ -0.76
ITGB1-217ENST00000494395 KDM4AO75164 1064 aa10.33□□□□□ -0.76
ITGB1-217ENST00000494395 CDC45O75419 566 aa10.33□□□□□ -0.76
ITGB1-217ENST00000494395 DNAJB2P25686 324 aa10.33□□□□□ -0.76
ITGB1-217ENST00000494395 MAPK4P31152 587 aa10.33□□□□□ -0.76
ITGB1-217ENST00000494395 FLT3LGP49771 235 aa10.33□□□□□ -0.76
ITGB1-217ENST00000494395 PSEN2P49810 448 aa10.33□□□□□ -0.76
ITGB1-217ENST00000494395 VARS2Q5ST30 1063 aaKnown RBP10.33□□□□□ -0.76
ITGB1-217ENST00000494395 MORN1Q5T089 497 aa10.33□□□□□ -0.76
ITGB1-217ENST00000494395 SLFN13Q68D06 897 aa10.33□□□□□ -0.76
ITGB1-217ENST00000494395 ANKS1AQ92625 1134 aa10.33□□□□□ -0.76
ITGB1-217ENST00000494395 ZNF333Q96JL9 665 aa10.33□□□□□ -0.76
ITGB1-217ENST00000494395 TTC14Q96N46 770 aa10.33□□□□□ -0.76
ITGB1-217ENST00000494395 TMEM47Q9BQJ4 181 aa10.33□□□□□ -0.76
ITGB1-217ENST00000494395 MOV10L1Q9BXT6 1211 aaKnown RBP10.33□□□□□ -0.76
ITGB1-217ENST00000494395 SPATC1LQ9H0A9 340 aa10.33□□□□□ -0.76
ITGB1-217ENST00000494395 CNNM2Q9H8M5 875 aa10.33□□□□□ -0.76
ITGB1-217ENST00000494395 ZSWIM5Q9P217 1185 aa10.33□□□□□ -0.76
ITGB1-217ENST00000494395 ZNF214Q9UL59 606 aaPredicted RBP10.33□□□□□ -0.76
ITGB1-217ENST00000494395 STX8Q9UNK0 236 aa10.33□□□□□ -0.76
ITGB1-217ENST00000494395 SMCHD1A6NHR9 2005 aa10.33□□□□□ -0.76
ITGB1-217ENST00000494395 SMAPO00193 183 aa10.32□□□□□ -0.76
ITGB1-217ENST00000494395 ST18O60284 1047 aa10.32□□□□□ -0.76
ITGB1-217ENST00000494395 PLA2G6O60733 806 aa10.32□□□□□ -0.76
ITGB1-217ENST00000494395 SNHG28P0DPA3 235 aa10.32□□□□□ -0.76
ITGB1-217ENST00000494395 TOP1P11387 765 aaKnown RBP10.32□□□□□ -0.76
ITGB1-217ENST00000494395 BMP3P12645 472 aa10.32□□□□□ -0.76
ITGB1-217ENST00000494395 COL9A3Q14050 684 aaPredicted RBP10.32□□□□□ -0.76
ITGB1-217ENST00000494395 TMEM132BQ14DG7 1078 aa10.32□□□□□ -0.76
ITGB1-217ENST00000494395 NECTIN1Q15223 517 aa10.32□□□□□ -0.76
ITGB1-217ENST00000494395 SEC23AQ15436 765 aa10.32□□□□□ -0.76
ITGB1-217ENST00000494395 CYB5R4Q7L1T6 521 aa10.32□□□□□ -0.76
ITGB1-217ENST00000494395 GPR142Q7Z601 462 aa10.32□□□□□ -0.76
ITGB1-217ENST00000494395 DGKHQ86XP1 1220 aa10.32□□□□□ -0.76
ITGB1-217ENST00000494395 ENAHQ8N8S7 591 aaPredicted RBP10.32□□□□□ -0.76
ITGB1-217ENST00000494395 PRPF38AQ8NAV1 312 aaKnown RBP10.32□□□□□ -0.76
ITGB1-217ENST00000494395 SHCBP1Q8NEM2 672 aa10.32□□□□□ -0.76
ITGB1-217ENST00000494395 COA7Q96BR5 231 aa10.32□□□□□ -0.76
ITGB1-217ENST00000494395 SLF1Q9BQI6 1058 aa10.32□□□□□ -0.76
ITGB1-217ENST00000494395 ZKSCAN3Q9BRR0 538 aa10.32□□□□□ -0.76
ITGB1-217ENST00000494395 ZBED2Q9BTP6 218 aa10.32□□□□□ -0.76
ITGB1-217ENST00000494395 KRT23Q9C075 422 aa10.32□□□□□ -0.76
ITGB1-217ENST00000494395 FEM1BQ9UK73 627 aa10.32□□□□□ -0.76
ITGB1-217ENST00000494395 BRCA2P51587 3418 aa10.32□□□□□ -0.76
ITGB1-217ENST00000494395 PLXNA1Q9UIW2 1896 aa10.32□□□□□ -0.76
ITGB1-217ENST00000494395 E7EWF7 191 aa10.31□□□□□ -0.76
ITGB1-217ENST00000494395 ATP2A1O14983 1001 aa10.31□□□□□ -0.76
ITGB1-217ENST00000494395 RAD21O60216 631 aa10.31□□□□□ -0.76
ITGB1-217ENST00000494395 PDHBP11177 359 aa10.31□□□□□ -0.76
ITGB1-217ENST00000494395 MCCP23508 829 aa10.31□□□□□ -0.76
ITGB1-217ENST00000494395 GRK4P32298 578 aa10.31□□□□□ -0.76
ITGB1-217ENST00000494395 SLC1A4P43007 532 aa10.31□□□□□ -0.76
ITGB1-217ENST00000494395 CCNA1P78396 465 aa10.31□□□□□ -0.76
ITGB1-217ENST00000494395 GRB14Q14449 540 aa10.31□□□□□ -0.76
ITGB1-217ENST00000494395 SKIV2LQ15477 1246 aaKnown RBP10.31□□□□□ -0.76
ITGB1-217ENST00000494395 SLC9C1Q4G0N8 1177 aa10.31□□□□□ -0.76
ITGB1-217ENST00000494395 PLEKHH3Q7Z736 793 aa10.31□□□□□ -0.76
ITGB1-217ENST00000494395 RIOX2Q8IUF8 465 aa10.31□□□□□ -0.76
ITGB1-217ENST00000494395 RAET1EQ8TD07 263 aa10.31□□□□□ -0.76
ITGB1-217ENST00000494395 SH3TC2Q8TF17 1288 aa10.31□□□□□ -0.76
ITGB1-217ENST00000494395 DCAF4Q8WV16 495 aa10.31□□□□□ -0.76
ITGB1-217ENST00000494395 SOCS4Q8WXH5 440 aa10.31□□□□□ -0.76
ITGB1-217ENST00000494395 SLC38A10Q9HBR0 1119 aa10.31□□□□□ -0.76
ITGB1-217ENST00000494395 TNKSO95271 1327 aa10.31□□□□□ -0.76
ITGB1-217ENST00000494395 SLC15A5A6NIM6 579 aa10.3□□□□□ -0.76
ITGB1-217ENST00000494395 CCDC85CA6NKD9 419 aa10.3□□□□□ -0.76
ITGB1-217ENST00000494395 TMEM232C9JQI7 657 aa10.3□□□□□ -0.76
ITGB1-217ENST00000494395 SLC27A2O14975 620 aa10.3□□□□□ -0.76
ITGB1-217ENST00000494395 ADCY3O60266 1144 aa10.3□□□□□ -0.76
ITGB1-217ENST00000494395 IGHA2P01877 340 aa10.3□□□□□ -0.76
ITGB1-217ENST00000494395 XRCC5P13010 732 aaKnown RBP10.3□□□□□ -0.76
ITGB1-217ENST00000494395 ELNP15502 786 aa10.3□□□□□ -0.76
ITGB1-217ENST00000494395 ERCC3P19447 782 aa10.3□□□□□ -0.76
ITGB1-217ENST00000494395 RGS19P49795 217 aa10.3□□□□□ -0.76
ITGB1-217ENST00000494395 STAT2P52630 851 aa10.3□□□□□ -0.76
ITGB1-217ENST00000494395 ANTXR2P58335 489 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms