RNA–Protein interactions for RNA: ENST00000494339.5

KPNA1-210, Transcript of karyopherin subunit alpha 1, humanhuman

TSL 2

Gene KPNA1, Length 1,923 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNA1-210ENST00000494339 LDHDQ86WU2 507 aa23.65■■□□□ 1.38
KPNA1-210ENST00000494339 FAM177A1Q8N128 213 aaPredicted RBP23.65■■□□□ 1.38
KPNA1-210ENST00000494339 RASGRP4Q8TDF6 673 aa23.65■■□□□ 1.38
KPNA1-210ENST00000494339 ELP3Q9H9T3 547 aa23.65■■□□□ 1.38
KPNA1-210ENST00000494339 AFG3L2Q9Y4W6 797 aa23.65■■□□□ 1.38
KPNA1-210ENST00000494339 GALNT17Q6IS24 598 aa23.65■■□□□ 1.38
KPNA1-210ENST00000494339 ANKRD13AQ8IZ07 590 aa23.65■■□□□ 1.38
KPNA1-210ENST00000494339 TANGO6Q9C0B7 1094 aa23.65■■□□□ 1.38
KPNA1-210ENST00000494339 C6orf50Q9HD87 102 aa23.65■■□□□ 1.38
KPNA1-210ENST00000494339 ARMC9Q7Z3E5 817 aa23.64■■□□□ 1.37
KPNA1-210ENST00000494339 FAM160B2Q86V87 743 aa23.64■■□□□ 1.37
KPNA1-210ENST00000494339 DAGLBQ8NCG7 672 aa23.64■■□□□ 1.37
KPNA1-210ENST00000494339 RTEL1Q9NZ71 1219 aa23.64■■□□□ 1.37
KPNA1-210ENST00000494339 PCDHA1Q9Y5I3 950 aa23.64■■□□□ 1.37
KPNA1-210ENST00000494339 PLA2G6O60733 806 aa23.63■■□□□ 1.37
KPNA1-210ENST00000494339 ATP2B1P20020 1258 aa23.63■■□□□ 1.37
KPNA1-210ENST00000494339 GNA11P29992 359 aa23.63■■□□□ 1.37
KPNA1-210ENST00000494339 TOB1P50616 345 aaPredicted RBP23.63■■□□□ 1.37
KPNA1-210ENST00000494339 MAP3K11Q16584 847 aa23.63■■□□□ 1.37
KPNA1-210ENST00000494339 ANO1Q5XXA6 986 aa23.63■■□□□ 1.37
KPNA1-210ENST00000494339 PIK3AP1Q6ZUJ8 805 aa23.63■■□□□ 1.37
KPNA1-210ENST00000494339 RPAP3Q9H6T3 665 aaPredicted RBP23.63■■□□□ 1.37
KPNA1-210ENST00000494339 POLR3EQ9NVU0 708 aa23.63■■□□□ 1.37
KPNA1-210ENST00000494339 ELP1O95163 1332 aa23.63■■□□□ 1.37
KPNA1-210ENST00000494339 C19orf81C9J6K1 198 aa23.63■■□□□ 1.37
KPNA1-210ENST00000494339 USH1GQ495M9 461 aa23.63■■□□□ 1.37
KPNA1-210ENST00000494339 AMNQ9BXJ7 453 aa23.63■■□□□ 1.37
KPNA1-210ENST00000494339 PCDHA6Q9UN73 950 aa23.63■■□□□ 1.37
KPNA1-210ENST00000494339 PCDHA8Q9Y5H6 950 aa23.63■■□□□ 1.37
KPNA1-210ENST00000494339 SMCHD1A6NHR9 2005 aa23.62■■□□□ 1.37
KPNA1-210ENST00000494339 ESYT2A0FGR8 921 aa23.62■■□□□ 1.37
KPNA1-210ENST00000494339 M0R2N6 131 aa23.62■■□□□ 1.37
KPNA1-210ENST00000494339 TAL1P17542 331 aaPredicted RBP23.62■■□□□ 1.37
KPNA1-210ENST00000494339 RILPL1Q5EBL4 403 aa23.62■■□□□ 1.37
KPNA1-210ENST00000494339 PPP1R18Q6NYC8 613 aa23.62■■□□□ 1.37
KPNA1-210ENST00000494339 FBXO11Q86XK2 927 aa23.62■■□□□ 1.37
KPNA1-210ENST00000494339 RCOR1Q9UKL0 485 aa23.62■■□□□ 1.37
KPNA1-210ENST00000494339 ADCY7P51828 1080 aa23.61■■□□□ 1.37
KPNA1-210ENST00000494339 STK38Q15208 465 aa23.61■■□□□ 1.37
KPNA1-210ENST00000494339 SF3A1Q15459 793 aaKnown RBP23.61■■□□□ 1.37
KPNA1-210ENST00000494339 CCDC174Q6PII3 467 aa23.61■■□□□ 1.37
KPNA1-210ENST00000494339 GPT2Q8TD30 523 aa23.61■■□□□ 1.37
KPNA1-210ENST00000494339 OTUD5Q96G74 571 aa23.61■■□□□ 1.37
KPNA1-210ENST00000494339 SLF1Q9BQI6 1058 aa23.61■■□□□ 1.37
KPNA1-210ENST00000494339 PTPRFP10586 1907 aa23.61■■□□□ 1.37
KPNA1-210ENST00000494339 FLOT1O75955 427 aa23.61■■□□□ 1.37
KPNA1-210ENST00000494339 NASPP49321 788 aaPredicted RBP23.61■■□□□ 1.37
KPNA1-210ENST00000494339 LINC00301Q8NCQ3 95 aa23.61■■□□□ 1.37
KPNA1-210ENST00000494339 C12orf42Q96LP6 360 aa23.61■■□□□ 1.37
KPNA1-210ENST00000494339 RANBP17Q9H2T7 1088 aaKnown RBP23.61■■□□□ 1.37
KPNA1-210ENST00000494339 TMOD4Q9NZQ9 345 aa23.61■■□□□ 1.37
KPNA1-210ENST00000494339 UBE2HP62256 183 aa23.6■■□□□ 1.37
KPNA1-210ENST00000494339 ERO1BQ86YB8 467 aa23.6■■□□□ 1.37
KPNA1-210ENST00000494339 PRPF38AQ8NAV1 312 aaKnown RBP23.6■■□□□ 1.37
KPNA1-210ENST00000494339 GZF1Q9H116 711 aaPredicted RBP23.6■■□□□ 1.37
KPNA1-210ENST00000494339 CCDC194A0A1B0GVG4 234 aa23.59■■□□□ 1.37
KPNA1-210ENST00000494339 YEATS4O95619 227 aa23.59■■□□□ 1.37
KPNA1-210ENST00000494339 REXO1Q8N1G1 1221 aaKnown RBP23.59■■□□□ 1.37
KPNA1-210ENST00000494339 RBM46Q8TBY0 533 aaKnown RBP23.59■■□□□ 1.37
KPNA1-210ENST00000494339 BICD2Q8TD16 824 aa23.59■■□□□ 1.37
KPNA1-210ENST00000494339 BIN2Q9UBW5 565 aaPredicted RBP23.59■■□□□ 1.37
KPNA1-210ENST00000494339 PCDHB6Q9Y5E3 794 aa23.59■■□□□ 1.37
KPNA1-210ENST00000494339 IRF6O14896 467 aa23.59■■□□□ 1.37
KPNA1-210ENST00000494339 PSTPIP2Q9H939 334 aa23.59■■□□□ 1.37
KPNA1-210ENST00000494339 RIC8AQ9NPQ8 531 aa23.59■■□□□ 1.37
KPNA1-210ENST00000494339 NOL7Q9UMY1 257 aaKnown RBP23.59■■□□□ 1.37
KPNA1-210ENST00000494339 SPDYE5A6NIY4 337 aa23.58■■□□□ 1.37
KPNA1-210ENST00000494339 PPATQ06203 517 aa23.58■■□□□ 1.37
KPNA1-210ENST00000494339 JAKMIP3Q5VZ66 844 aa23.58■■□□□ 1.37
KPNA1-210ENST00000494339 CUL5Q93034 780 aa23.58■■□□□ 1.37
KPNA1-210ENST00000494339 PGBD1Q96JS3 809 aa23.58■■□□□ 1.37
KPNA1-210ENST00000494339 TMEM260Q9NX78 707 aa23.58■■□□□ 1.37
KPNA1-210ENST00000494339 PARP14Q460N5 1801 aa23.58■■□□□ 1.36
KPNA1-210ENST00000494339 GOLGA6L4A6NEF3 574 aa23.57■■□□□ 1.36
KPNA1-210ENST00000494339 WNT7AO00755 349 aa23.57■■□□□ 1.36
KPNA1-210ENST00000494339 SPTLC2O15270 562 aa23.57■■□□□ 1.36
KPNA1-210ENST00000494339 ME1P48163 572 aa23.57■■□□□ 1.36
KPNA1-210ENST00000494339 LDLRAD1Q5T700 205 aa23.57■■□□□ 1.36
KPNA1-210ENST00000494339 PPP1R9AQ9ULJ8 1098 aa23.57■■□□□ 1.36
KPNA1-210ENST00000494339 SLC39A14Q15043 492 aa23.57■■□□□ 1.36
KPNA1-210ENST00000494339 PTPAQ15257 358 aa23.57■■□□□ 1.36
KPNA1-210ENST00000494339 UBE2SQ16763 222 aa23.57■■□□□ 1.36
KPNA1-210ENST00000494339 SH3D19Q5HYK7 790 aa23.57■■□□□ 1.36
KPNA1-210ENST00000494339 KCNG4Q8TDN1 519 aa23.57■■□□□ 1.36
KPNA1-210ENST00000494339 MARCKSP29966 332 aaPredicted RBP23.56■■□□□ 1.36
KPNA1-210ENST00000494339 MRPL12P52815 198 aaKnown RBP23.56■■□□□ 1.36
KPNA1-210ENST00000494339 INF2Q27J81 1249 aa23.56■■□□□ 1.36
KPNA1-210ENST00000494339 KRT25Q7Z3Z0 450 aa23.56■■□□□ 1.36
KPNA1-210ENST00000494339 OPTNQ96CV9 577 aa23.56■■□□□ 1.36
KPNA1-210ENST00000494339 CELF2O95319 508 aaKnown RBP23.55■■□□□ 1.36
KPNA1-210ENST00000494339 TTC38Q5R3I4 469 aa23.55■■□□□ 1.36
KPNA1-210ENST00000494339 GBA2Q9HCG7 927 aaPredicted RBP23.55■■□□□ 1.36
KPNA1-210ENST00000494339 PCDHA7Q9UN72 937 aa23.55■■□□□ 1.36
KPNA1-210ENST00000494339 RLFQ13129 1914 aa23.54■■□□□ 1.36
KPNA1-210ENST00000494339 USP17L15C9J2P7 530 aa23.54■■□□□ 1.36
KPNA1-210ENST00000494339 USP17L13C9JLJ4 530 aa23.54■■□□□ 1.36
KPNA1-210ENST00000494339 USP17L11C9JVI0 530 aa23.54■■□□□ 1.36
KPNA1-210ENST00000494339 USP17L18D6R9N7 530 aa23.54■■□□□ 1.36
KPNA1-210ENST00000494339 USP17L22D6RA61 530 aa23.54■■□□□ 1.36
KPNA1-210ENST00000494339 USP17L17D6RBQ6 530 aa23.54■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms