RNA–Protein interactions for RNA: ENST00000494297.5

SRPRB-205, Transcript of SRP receptor subunit beta, humanhuman

TSL 2

Gene SRPRB, Length 555 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRB-205ENST00000494297 IFIT3O14879 490 aaKnown RBP6.3□□□□□ -1.4
SRPRB-205ENST00000494297 STRNO43815 780 aa6.3□□□□□ -1.4
SRPRB-205ENST00000494297 RAD21O60216 631 aa6.3□□□□□ -1.4
SRPRB-205ENST00000494297 ZBED4O75132 1171 aa6.3□□□□□ -1.4
SRPRB-205ENST00000494297 SLC25A27O95847 323 aa6.3□□□□□ -1.4
SRPRB-205ENST00000494297 STAT3P40763 770 aa6.3□□□□□ -1.4
SRPRB-205ENST00000494297 LIFRP42702 1097 aa6.3□□□□□ -1.4
SRPRB-205ENST00000494297 OAZ1P54368 228 aa6.3□□□□□ -1.4
SRPRB-205ENST00000494297 ANTXR2P58335 489 aa6.3□□□□□ -1.4
SRPRB-205ENST00000494297 CCNA1P78396 465 aa6.3□□□□□ -1.4
SRPRB-205ENST00000494297 ZNF543Q08ER8 600 aa6.3□□□□□ -1.4
SRPRB-205ENST00000494297 IRF5Q13568 498 aa6.3□□□□□ -1.4
SRPRB-205ENST00000494297 TMEM132BQ14DG7 1078 aa6.3□□□□□ -1.4
SRPRB-205ENST00000494297 WTAPQ15007 396 aa6.3□□□□□ -1.4
SRPRB-205ENST00000494297 ADCK5Q3MIX3 580 aa6.3□□□□□ -1.4
SRPRB-205ENST00000494297 GPATCH4Q5T3I0 446 aaKnown RBP6.3□□□□□ -1.4
SRPRB-205ENST00000494297 DMRTA1Q5VZB9 504 aa6.3□□□□□ -1.4
SRPRB-205ENST00000494297 FBXO46Q6PJ61 603 aaPredicted RBP6.3□□□□□ -1.4
SRPRB-205ENST00000494297 DHX32Q7L7V1 743 aaKnown RBP6.3□□□□□ -1.4
SRPRB-205ENST00000494297 RIOX2Q8IUF8 465 aa6.3□□□□□ -1.4
SRPRB-205ENST00000494297 FBXL16Q8N461 479 aa6.3□□□□□ -1.4
SRPRB-205ENST00000494297 SHCBP1Q8NEM2 672 aa6.3□□□□□ -1.4
SRPRB-205ENST00000494297 PTCD2Q8WV60 388 aaKnown RBP6.3□□□□□ -1.4
SRPRB-205ENST00000494297 COA7Q96BR5 231 aa6.3□□□□□ -1.4
SRPRB-205ENST00000494297 ATG4CQ96DT6 458 aa6.3□□□□□ -1.4
SRPRB-205ENST00000494297 IL17RAQ96F46 866 aa6.3□□□□□ -1.4
SRPRB-205ENST00000494297 MAP3K14Q99558 947 aa6.3□□□□□ -1.4
SRPRB-205ENST00000494297 MOV10L1Q9BXT6 1211 aaKnown RBP6.3□□□□□ -1.4
SRPRB-205ENST00000494297 MCOLN1Q9GZU1 580 aa6.3□□□□□ -1.4
SRPRB-205ENST00000494297 SPATC1LQ9H0A9 340 aa6.3□□□□□ -1.4
SRPRB-205ENST00000494297 SLC38A10Q9HBR0 1119 aa6.3□□□□□ -1.4
SRPRB-205ENST00000494297 SRRDQ9UH36 339 aa6.3□□□□□ -1.4
SRPRB-205ENST00000494297 ZNF214Q9UL59 606 aaPredicted RBP6.3□□□□□ -1.4
SRPRB-205ENST00000494297 GTF3C3Q9Y5Q9 886 aa6.3□□□□□ -1.4
SRPRB-205ENST00000494297 SNX14Q9Y5W7 946 aa6.3□□□□□ -1.4
SRPRB-205ENST00000494297 PALM3A6NDB9 673 aaPredicted RBP6.29□□□□□ -1.4
SRPRB-205ENST00000494297 SH2B2O14492 632 aaPredicted RBP6.29□□□□□ -1.4
SRPRB-205ENST00000494297 TNPO2O14787 897 aaKnown RBP6.29□□□□□ -1.4
SRPRB-205ENST00000494297 PRC1O43663 620 aa6.29□□□□□ -1.4
SRPRB-205ENST00000494297 PEX10O60683 326 aa6.29□□□□□ -1.4
SRPRB-205ENST00000494297 XRCC5P13010 732 aaKnown RBP6.29□□□□□ -1.4
SRPRB-205ENST00000494297 PTPREP23469 700 aa6.29□□□□□ -1.4
SRPRB-205ENST00000494297 PSMA5P28066 241 aa6.29□□□□□ -1.4
SRPRB-205ENST00000494297 COPB2P35606 906 aa6.29□□□□□ -1.4
SRPRB-205ENST00000494297 FLT3LGP49771 235 aa6.29□□□□□ -1.4
SRPRB-205ENST00000494297 TROAPQ12815 778 aa6.29□□□□□ -1.4
SRPRB-205ENST00000494297 COL9A3Q14050 684 aaPredicted RBP6.29□□□□□ -1.4
SRPRB-205ENST00000494297 ASPRV1Q53RT3 343 aa6.29□□□□□ -1.4
SRPRB-205ENST00000494297 TMEM67Q5HYA8 995 aa6.29□□□□□ -1.4
SRPRB-205ENST00000494297 MORN1Q5T089 497 aa6.29□□□□□ -1.4
SRPRB-205ENST00000494297 TTBK2Q6IQ55 1244 aa6.29□□□□□ -1.4
SRPRB-205ENST00000494297 KCTD1Q719H9 257 aa6.29□□□□□ -1.4
SRPRB-205ENST00000494297 DHX30Q7L2E3 1194 aaKnown RBP eCLIP6.29□□□□□ -1.4
SRPRB-205ENST00000494297 CHST3Q7LGC8 479 aa6.29□□□□□ -1.4
SRPRB-205ENST00000494297 GPR142Q7Z601 462 aa6.29□□□□□ -1.4
SRPRB-205ENST00000494297 PLEKHH3Q7Z736 793 aa6.29□□□□□ -1.4
SRPRB-205ENST00000494297 SGMS1Q86VZ5 419 aa6.29□□□□□ -1.4
SRPRB-205ENST00000494297 TNS4Q8IZW8 715 aa6.29□□□□□ -1.4
SRPRB-205ENST00000494297 ABRAQ8N0Z2 381 aa6.29□□□□□ -1.4
SRPRB-205ENST00000494297 PXYLP1Q8TE99 480 aa6.29□□□□□ -1.4
SRPRB-205ENST00000494297 USP6NLQ92738 828 aa6.29□□□□□ -1.4
SRPRB-205ENST00000494297 KIFC2Q96AC6 838 aa6.29□□□□□ -1.4
SRPRB-205ENST00000494297 NUDT12Q9BQG2 462 aa6.29□□□□□ -1.4
SRPRB-205ENST00000494297 PAGR1Q9BTK6 254 aa6.29□□□□□ -1.4
SRPRB-205ENST00000494297 TM6SF1Q9BZW5 370 aa6.29□□□□□ -1.4
SRPRB-205ENST00000494297 PORCNQ9H237 461 aa6.29□□□□□ -1.4
SRPRB-205ENST00000494297 RANBP17Q9H2T7 1088 aaKnown RBP6.29□□□□□ -1.4
SRPRB-205ENST00000494297 MROH8Q9H579 483 aa6.29□□□□□ -1.4
SRPRB-205ENST00000494297 LY9Q9HBG7 655 aa6.29□□□□□ -1.4
SRPRB-205ENST00000494297 SENP2Q9HC62 589 aa6.29□□□□□ -1.4
SRPRB-205ENST00000494297 PNMA2Q9UL42 364 aa6.29□□□□□ -1.4
SRPRB-205ENST00000494297 PRR12Q9ULL5 1215 aa6.29□□□□□ -1.4
SRPRB-205ENST00000494297 GABRQQ9UN88 632 aa6.29□□□□□ -1.4
SRPRB-205ENST00000494297 LAMA4Q16363 1823 aa6.29□□□□□ -1.4
SRPRB-205ENST00000494297 ZNF536O15090 1300 aa6.28□□□□□ -1.4
SRPRB-205ENST00000494297 SLC15A5A6NIM6 579 aa6.28□□□□□ -1.4
SRPRB-205ENST00000494297 DDAH1O94760 285 aa6.28□□□□□ -1.4
SRPRB-205ENST00000494297 HOXC6P09630 235 aa6.28□□□□□ -1.4
SRPRB-205ENST00000494297 PARP1P09874 1014 aaKnown RBP6.28□□□□□ -1.4
SRPRB-205ENST00000494297 ERCC3P19447 782 aa6.28□□□□□ -1.4
SRPRB-205ENST00000494297 SMARCA1P28370 1054 aa6.28□□□□□ -1.4
SRPRB-205ENST00000494297 SLC16A2P36021 539 aa6.28□□□□□ -1.4
SRPRB-205ENST00000494297 ANAPC15P60006 121 aa6.28□□□□□ -1.4
SRPRB-205ENST00000494297 PRKCZQ05513 592 aa6.28□□□□□ -1.4
SRPRB-205ENST00000494297 GRB14Q14449 540 aa6.28□□□□□ -1.4
SRPRB-205ENST00000494297 GRM4Q14833 912 aa6.28□□□□□ -1.4
SRPRB-205ENST00000494297 CCDC96Q2M329 555 aa6.28□□□□□ -1.4
SRPRB-205ENST00000494297 TKFCQ3LXA3 575 aa6.28□□□□□ -1.4
SRPRB-205ENST00000494297 C8orf34Q49A92 452 aa6.28□□□□□ -1.4
SRPRB-205ENST00000494297 SYDE2Q5VT97 1194 aa6.28□□□□□ -1.4
SRPRB-205ENST00000494297 RASGRP2Q7LDG7 609 aa6.28□□□□□ -1.4
SRPRB-205ENST00000494297 CATIPQ7Z7H3 387 aa6.28□□□□□ -1.4
SRPRB-205ENST00000494297 NBPF11Q86T75 865 aa6.28□□□□□ -1.4
SRPRB-205ENST00000494297 CCAR1Q8IX12 1150 aaKnown RBP6.28□□□□□ -1.4
SRPRB-205ENST00000494297 STAG2Q8N3U4 1231 aa6.28□□□□□ -1.4
SRPRB-205ENST00000494297 ZNF454Q8N9F8 522 aa6.28□□□□□ -1.4
SRPRB-205ENST00000494297 SOCS4Q8WXH5 440 aa6.28□□□□□ -1.4
SRPRB-205ENST00000494297 KCTD12Q96CX2 325 aaKnown RBP6.28□□□□□ -1.4
SRPRB-205ENST00000494297 TEX13BQ9BXU2 312 aa6.28□□□□□ -1.4
SRPRB-205ENST00000494297 AGXT2Q9BYV1 514 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms