RNA–Protein interactions for RNA: ENST00000494183.5

COL25A1-204, Transcript of collagen type XXV alpha 1 chain, humanhuman

TSL 5

Gene COL25A1, Length 4,630 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1-204ENST00000494183 TBCKQ8TEA7 893 aa12.93□□□□□ -0.34
COL25A1-204ENST00000494183 GJA10Q969M2 543 aa12.93□□□□□ -0.34
COL25A1-204ENST00000494183 PTCH1Q13635 1447 aa12.92□□□□□ -0.34
COL25A1-204ENST00000494183 MORC3Q14149 939 aa12.92□□□□□ -0.34
COL25A1-204ENST00000494183 CFAP58Q5T655 872 aa12.92□□□□□ -0.34
COL25A1-204ENST00000494183 CIAPIN1Q6FI81 312 aa12.92□□□□□ -0.34
COL25A1-204ENST00000494183 PNMA2Q9UL42 364 aa12.92□□□□□ -0.34
COL25A1-204ENST00000494183 USTQ9Y2C2 406 aa12.92□□□□□ -0.34
COL25A1-204ENST00000494183 NCAPD2Q15021 1401 aa12.92□□□□□ -0.34
COL25A1-204ENST00000494183 CEP104O60308 925 aa12.92□□□□□ -0.34
COL25A1-204ENST00000494183 STAT1P42224 750 aa12.92□□□□□ -0.34
COL25A1-204ENST00000494183 RBM6P78332 1123 aaKnown RBP12.92□□□□□ -0.34
COL25A1-204ENST00000494183 LRCH2Q5VUJ6 765 aa12.92□□□□□ -0.34
COL25A1-204ENST00000494183 RNF169Q8NCN4 708 aa12.92□□□□□ -0.34
COL25A1-204ENST00000494183 NAP1L3Q99457 506 aaPredicted RBP12.92□□□□□ -0.34
COL25A1-204ENST00000494183 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.92□□□□□ -0.34
COL25A1-204ENST00000494183 PCDHA4Q9UN74 947 aa12.92□□□□□ -0.34
COL25A1-204ENST00000494183 IQGAP3Q86VI3 1631 aa12.92□□□□□ -0.34
COL25A1-204ENST00000494183 RNF17Q9BXT8 1623 aaKnown RBP12.92□□□□□ -0.34
COL25A1-204ENST00000494183 RPN1P04843 607 aaKnown RBP12.92□□□□□ -0.34
COL25A1-204ENST00000494183 TRAPPC10P48553 1259 aa12.92□□□□□ -0.34
COL25A1-204ENST00000494183 CDK8P49336 464 aa12.92□□□□□ -0.34
COL25A1-204ENST00000494183 KIF23Q02241 960 aaPredicted RBP12.92□□□□□ -0.34
COL25A1-204ENST00000494183 KCTD2Q14681 263 aa12.92□□□□□ -0.34
COL25A1-204ENST00000494183 CCDC63Q8NA47 563 aa12.92□□□□□ -0.34
COL25A1-204ENST00000494183 TRIM31Q9BZY9 425 aa12.92□□□□□ -0.34
COL25A1-204ENST00000494183 TNS3Q68CZ2 1445 aa12.92□□□□□ -0.34
COL25A1-204ENST00000494183 A0A1W2PQ27 194 aa12.92□□□□□ -0.34
COL25A1-204ENST00000494183 A0A1W2PQ64 194 aa12.92□□□□□ -0.34
COL25A1-204ENST00000494183 A0A1W2PQD8 194 aa12.92□□□□□ -0.34
COL25A1-204ENST00000494183 K7ENM7 598 aa12.92□□□□□ -0.34
COL25A1-204ENST00000494183 LIG4P49917 911 aa12.92□□□□□ -0.34
COL25A1-204ENST00000494183 C8orf74Q6P047 294 aa12.92□□□□□ -0.34
COL25A1-204ENST00000494183 TRIML1Q8N9V2 468 aa12.92□□□□□ -0.34
COL25A1-204ENST00000494183 ST7Q9NRC1 585 aa12.92□□□□□ -0.34
COL25A1-204ENST00000494183 LRRIQ4A6NIV6 560 aa12.91□□□□□ -0.34
COL25A1-204ENST00000494183 ADAM9Q13443 819 aa12.91□□□□□ -0.34
COL25A1-204ENST00000494183 ODR4Q5SWX8 454 aa12.91□□□□□ -0.34
COL25A1-204ENST00000494183 SMIM5Q71RC9 77 aa12.91□□□□□ -0.34
COL25A1-204ENST00000494183 ZFP91Q96JP5 570 aaPredicted RBP12.91□□□□□ -0.34
COL25A1-204ENST00000494183 GJD4Q96KN9 370 aaPredicted RBP12.91□□□□□ -0.34
COL25A1-204ENST00000494183 IFIH1Q9BYX4 1025 aaKnown RBP12.91□□□□□ -0.34
COL25A1-204ENST00000494183 CD209Q9NNX6 404 aa12.91□□□□□ -0.34
COL25A1-204ENST00000494183 COL15A1P39059 1388 aa12.91□□□□□ -0.34
COL25A1-204ENST00000494183 GNA14O95837 355 aa12.91□□□□□ -0.34
COL25A1-204ENST00000494183 ERCC5P28715 1186 aaPredicted RBP12.91□□□□□ -0.34
COL25A1-204ENST00000494183 ZNF365Q70YC5 407 aa12.91□□□□□ -0.34
COL25A1-204ENST00000494183 ZBTB8OSQ8IWT0 167 aa12.91□□□□□ -0.34
COL25A1-204ENST00000494183 RTKN2Q8IZC4 609 aa12.91□□□□□ -0.34
COL25A1-204ENST00000494183 MYO1AQ9UBC5 1043 aa12.91□□□□□ -0.34
COL25A1-204ENST00000494183 FAM169AQ9Y6X4 670 aa12.91□□□□□ -0.34
COL25A1-204ENST00000494183 ZEB2O60315 1214 aa12.91□□□□□ -0.34
COL25A1-204ENST00000494183 PRPF6O94906 941 aaKnown RBP12.91□□□□□ -0.34
COL25A1-204ENST00000494183 SELENOSQ9BQE4 189 aa12.91□□□□□ -0.34
COL25A1-204ENST00000494183 ISCA1Q9BUE6 129 aa12.91□□□□□ -0.34
COL25A1-204ENST00000494183 DNAJC5Q9H3Z4 198 aa12.91□□□□□ -0.34
COL25A1-204ENST00000494183 POLR3EQ9NVU0 708 aa12.91□□□□□ -0.34
COL25A1-204ENST00000494183 RABGAP1Q9Y3P9 1069 aa12.91□□□□□ -0.34
COL25A1-204ENST00000494183 DLATP10515 647 aaKnown RBP12.9□□□□□ -0.34
COL25A1-204ENST00000494183 FOXP4Q8IVH2 680 aaPredicted RBP12.9□□□□□ -0.34
COL25A1-204ENST00000494183 UBL4BQ8N7F7 174 aa12.9□□□□□ -0.34
COL25A1-204ENST00000494183 DPP9Q86TI2 863 aa12.9□□□□□ -0.34
COL25A1-204ENST00000494183 PROCA1Q8NCQ7 364 aaPredicted RBP12.9□□□□□ -0.34
COL25A1-204ENST00000494183 SREK1Q8WXA9 508 aaKnown RBP12.9□□□□□ -0.34
COL25A1-204ENST00000494183 ERO1AQ96HE7 468 aa12.9□□□□□ -0.34
COL25A1-204ENST00000494183 MMP1P03956 469 aa12.9□□□□□ -0.34
COL25A1-204ENST00000494183 ATP2A2P16615 1042 aaKnown RBP12.9□□□□□ -0.34
COL25A1-204ENST00000494183 ABCB4P21439 1286 aa12.9□□□□□ -0.34
COL25A1-204ENST00000494183 STAT2P52630 851 aa12.9□□□□□ -0.34
COL25A1-204ENST00000494183 IGBP1P78318 339 aa12.9□□□□□ -0.34
COL25A1-204ENST00000494183 TXNRD1Q16881 649 aa12.9□□□□□ -0.34
COL25A1-204ENST00000494183 CCDC117Q8IWD4 279 aaPredicted RBP12.9□□□□□ -0.34
COL25A1-204ENST00000494183 LINC00301Q8NCQ3 95 aa12.9□□□□□ -0.34
COL25A1-204ENST00000494183 UBLCP1Q8WVY7 318 aaPredicted RBP12.9□□□□□ -0.34
COL25A1-204ENST00000494183 LSM14BQ9BX40 385 aaKnown RBP12.9□□□□□ -0.34
COL25A1-204ENST00000494183 NUCKS1Q9H1E3 243 aaKnown RBP12.9□□□□□ -0.34
COL25A1-204ENST00000494183 CALCOCO1Q9P1Z2 691 aa12.9□□□□□ -0.34
COL25A1-204ENST00000494183 DAPK3O43293 454 aa12.9□□□□□ -0.34
COL25A1-204ENST00000494183 COBLO75128 1261 aa12.9□□□□□ -0.34
COL25A1-204ENST00000494183 ZBTB7AO95365 584 aa12.9□□□□□ -0.34
COL25A1-204ENST00000494183 FERP16591 822 aa12.9□□□□□ -0.34
COL25A1-204ENST00000494183 POLGP54098 1239 aaPredicted RBP12.9□□□□□ -0.34
COL25A1-204ENST00000494183 SPATA1Q5VX52 437 aa12.9□□□□□ -0.34
COL25A1-204ENST00000494183 ARMCX5Q6P1M9 558 aa12.9□□□□□ -0.34
COL25A1-204ENST00000494183 PEX26Q7Z412 305 aa12.9□□□□□ -0.34
COL25A1-204ENST00000494183 LARP4BQ92615 738 aaKnown RBP12.9□□□□□ -0.34
COL25A1-204ENST00000494183 USP31Q70CQ4 1352 aa12.89□□□□□ -0.35
COL25A1-204ENST00000494183 A0A087WWV3 80 aa12.89□□□□□ -0.35
COL25A1-204ENST00000494183 CYP2D6P10635 497 aa12.89□□□□□ -0.35
COL25A1-204ENST00000494183 ADRA2BP18089 450 aa12.89□□□□□ -0.35
COL25A1-204ENST00000494183 DGKHQ86XP1 1220 aa12.89□□□□□ -0.35
COL25A1-204ENST00000494183 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.89□□□□□ -0.35
COL25A1-204ENST00000494183 GSDMAQ96QA5 445 aa12.89□□□□□ -0.35
COL25A1-204ENST00000494183 ZNF577Q9BSK1 485 aa12.89□□□□□ -0.35
COL25A1-204ENST00000494183 STMN4Q9H169 189 aaPredicted RBP12.89□□□□□ -0.35
COL25A1-204ENST00000494183 TDRD3Q9H7E2 651 aaKnown RBP12.89□□□□□ -0.35
COL25A1-204ENST00000494183 KCNK9Q9NPC2 374 aa12.89□□□□□ -0.35
COL25A1-204ENST00000494183 RCOR1Q9UKL0 485 aa12.89□□□□□ -0.35
COL25A1-204ENST00000494183 SH3RF3Q8TEJ3 882 aaPredicted RBP12.89□□□□□ -0.35
COL25A1-204ENST00000494183 ZNF526Q8TF50 670 aaPredicted RBP12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms