RNA–Protein interactions for RNA: ENST00000494016.1

CPSF7-213, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 2

Gene CPSF7, Length 656 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-213ENST00000494016 CHSY3Q70JA7 882 aa7.13□□□□□ -1.27
CPSF7-213ENST00000494016 DHX32Q7L7V1 743 aaKnown RBP7.13□□□□□ -1.27
CPSF7-213ENST00000494016 UBE2OQ9C0C9 1292 aaKnown RBP7.13□□□□□ -1.27
CPSF7-213ENST00000494016 PDGFDQ9GZP0 370 aaPredicted RBP7.13□□□□□ -1.27
CPSF7-213ENST00000494016 SH2B1Q9NRF2 756 aaPredicted RBP7.13□□□□□ -1.27
CPSF7-213ENST00000494016 HMG20BQ9P0W2 317 aa7.13□□□□□ -1.27
CPSF7-213ENST00000494016 TPCN1Q9ULQ1 816 aa7.13□□□□□ -1.27
CPSF7-213ENST00000494016 AKAP11Q9UKA4 1901 aa7.13□□□□□ -1.27
CPSF7-213ENST00000494016 LAMA4Q16363 1823 aa7.13□□□□□ -1.27
CPSF7-213ENST00000494016 SPEF2Q9C093 1822 aa7.13□□□□□ -1.27
CPSF7-213ENST00000494016 RIC1Q4ADV7 1423 aa7.12□□□□□ -1.27
CPSF7-213ENST00000494016 KRTAP9-6A0A140TA67 174 aa7.12□□□□□ -1.27
CPSF7-213ENST00000494016 GOLGA6L3A6NEY3 463 aa7.12□□□□□ -1.27
CPSF7-213ENST00000494016 GOLGA6L22H0YM25 854 aa7.12□□□□□ -1.27
CPSF7-213ENST00000494016 MSTNO14793 375 aa7.12□□□□□ -1.27
CPSF7-213ENST00000494016 DTNBO60941 627 aa7.12□□□□□ -1.27
CPSF7-213ENST00000494016 CYP21A2P08686 494 aa7.12□□□□□ -1.27
CPSF7-213ENST00000494016 HOXD8P13378 290 aaPredicted RBP7.12□□□□□ -1.27
CPSF7-213ENST00000494016 SYT1P21579 422 aa7.12□□□□□ -1.27
CPSF7-213ENST00000494016 FGFR2P21802 821 aa7.12□□□□□ -1.27
CPSF7-213ENST00000494016 AMPD1P23109 780 aa7.12□□□□□ -1.27
CPSF7-213ENST00000494016 NRLP54845 237 aa7.12□□□□□ -1.27
CPSF7-213ENST00000494016 EXOSC10Q01780 885 aaKnown RBP7.12□□□□□ -1.27
CPSF7-213ENST00000494016 PCSK7Q16549 785 aa7.12□□□□□ -1.27
CPSF7-213ENST00000494016 KLHL40Q2TBA0 621 aa7.12□□□□□ -1.27
CPSF7-213ENST00000494016 TAF7LQ5H9L4 462 aa7.12□□□□□ -1.27
CPSF7-213ENST00000494016 CCDC158Q5M9N0 1113 aa7.12□□□□□ -1.27
CPSF7-213ENST00000494016 TTC39AQ5SRH9 613 aa7.12□□□□□ -1.27
CPSF7-213ENST00000494016 L1TD1Q5T7N2 865 aaKnown RBP7.12□□□□□ -1.27
CPSF7-213ENST00000494016 STOX1Q6ZVD7 989 aa7.12□□□□□ -1.27
CPSF7-213ENST00000494016 GJD3Q8N144 294 aa7.12□□□□□ -1.27
CPSF7-213ENST00000494016 NECAB1Q8N987 351 aa7.12□□□□□ -1.27
CPSF7-213ENST00000494016 GPT2Q8TD30 523 aa7.12□□□□□ -1.27
CPSF7-213ENST00000494016 TRPM4Q8TD43 1214 aa7.12□□□□□ -1.27
CPSF7-213ENST00000494016 SMARCC1Q92922 1105 aaPredicted RBP7.12□□□□□ -1.27
CPSF7-213ENST00000494016 OSBP2Q969R2 916 aa7.12□□□□□ -1.27
CPSF7-213ENST00000494016 ZNF512BQ96KM6 892 aaPredicted RBP7.12□□□□□ -1.27
CPSF7-213ENST00000494016 NEK1Q96PY6 1258 aa7.12□□□□□ -1.27
CPSF7-213ENST00000494016 DSCC1Q9BVC3 393 aa7.12□□□□□ -1.27
CPSF7-213ENST00000494016 IGFLR1Q9H665 355 aa7.12□□□□□ -1.27
CPSF7-213ENST00000494016 ELP3Q9H9T3 547 aa7.12□□□□□ -1.27
CPSF7-213ENST00000494016 BRPF3Q9ULD4 1205 aa7.12□□□□□ -1.27
CPSF7-213ENST00000494016 SLC6A14Q9UN76 642 aa7.12□□□□□ -1.27
CPSF7-213ENST00000494016 STARD13Q9Y3M8 1113 aa7.12□□□□□ -1.27
CPSF7-213ENST00000494016 ZSCAN21Q9Y5A6 473 aaPredicted RBP7.12□□□□□ -1.27
CPSF7-213ENST00000494016 TCHHQ07283 1943 aa7.11□□□□□ -1.27
CPSF7-213ENST00000494016 TAF1LQ8IZX4 1826 aa7.11□□□□□ -1.27
CPSF7-213ENST00000494016 WDR33Q9C0J8 1336 aaKnown RBP7.11□□□□□ -1.27
CPSF7-213ENST00000494016 COL5A3P25940 1745 aaPredicted RBP7.11□□□□□ -1.27
CPSF7-213ENST00000494016 COL24A1Q17RW2 1714 aa7.11□□□□□ -1.27
CPSF7-213ENST00000494016 DDX60Q8IY21 1712 aaKnown RBP7.11□□□□□ -1.27
CPSF7-213ENST00000494016 A0A0G2JLW4 131 aa7.11□□□□□ -1.27
CPSF7-213ENST00000494016 ZBTB42B2RXF5 422 aa7.11□□□□□ -1.27
CPSF7-213ENST00000494016 M0R2C6 588 aa7.11□□□□□ -1.27
CPSF7-213ENST00000494016 PLSCR1O15162 318 aa7.11□□□□□ -1.27
CPSF7-213ENST00000494016 FOXP2O15409 715 aa7.11□□□□□ -1.27
CPSF7-213ENST00000494016 PDE8BO95263 885 aa7.11□□□□□ -1.27
CPSF7-213ENST00000494016 ZBTB7AO95365 584 aa7.11□□□□□ -1.27
CPSF7-213ENST00000494016 PSAPP07602 524 aa7.11□□□□□ -1.27
CPSF7-213ENST00000494016 ZSCAN22P10073 491 aaPredicted RBP7.11□□□□□ -1.27
CPSF7-213ENST00000494016 HSPD1P10809 573 aaKnown RBP7.11□□□□□ -1.27
CPSF7-213ENST00000494016 HCLS1P14317 486 aaPredicted RBP7.11□□□□□ -1.27
CPSF7-213ENST00000494016 GJB2P29033 226 aa7.11□□□□□ -1.27
CPSF7-213ENST00000494016 SOX18P35713 384 aa7.11□□□□□ -1.27
CPSF7-213ENST00000494016 GPLD1P80108 840 aa7.11□□□□□ -1.27
CPSF7-213ENST00000494016 PLAURQ03405 335 aa7.11□□□□□ -1.27
CPSF7-213ENST00000494016 TBC1D8BQ0IIM8 1120 aa7.11□□□□□ -1.27
CPSF7-213ENST00000494016 KRT32Q14532 448 aa7.11□□□□□ -1.27
CPSF7-213ENST00000494016 ATP2B3Q16720 1220 aa7.11□□□□□ -1.27
CPSF7-213ENST00000494016 METTL24Q5JXM2 366 aa7.11□□□□□ -1.27
CPSF7-213ENST00000494016 BLOC1S2Q6QNY1 142 aa7.11□□□□□ -1.27
CPSF7-213ENST00000494016 CCDC83Q8IWF9 413 aa7.11□□□□□ -1.27
CPSF7-213ENST00000494016 LINC00116Q8NCU8 138 aa7.11□□□□□ -1.27
CPSF7-213ENST00000494016 OR13H1Q8NG92 308 aa7.11□□□□□ -1.27
CPSF7-213ENST00000494016 TCEANC2Q96MN5 208 aa7.11□□□□□ -1.27
CPSF7-213ENST00000494016 UTP14AQ9BVJ6 771 aaKnown RBP7.11□□□□□ -1.27
CPSF7-213ENST00000494016 SEC31BQ9NQW1 1179 aa7.11□□□□□ -1.27
CPSF7-213ENST00000494016 CNNM1Q9NRU3 951 aa7.11□□□□□ -1.27
CPSF7-213ENST00000494016 SMC3Q9UQE7 1217 aa7.11□□□□□ -1.27
CPSF7-213ENST00000494016 DDX49Q9Y6V7 483 aaKnown RBP7.11□□□□□ -1.27
CPSF7-213ENST00000494016 ZNF831Q5JPB2 1677 aa7.11□□□□□ -1.27
CPSF7-213ENST00000494016 MYO5AQ9Y4I1 1855 aaKnown RBP7.11□□□□□ -1.27
CPSF7-213ENST00000494016 ABCC12Q96J65 1359 aa7.1□□□□□ -1.27
CPSF7-213ENST00000494016 MAST3O60307 1309 aa7.1□□□□□ -1.27
CPSF7-213ENST00000494016 A6NHS1 94 aa7.1□□□□□ -1.27
CPSF7-213ENST00000494016 STX6O43752 255 aa7.1□□□□□ -1.27
CPSF7-213ENST00000494016 NTSR2O95665 410 aa7.1□□□□□ -1.27
CPSF7-213ENST00000494016 MCAMP43121 646 aa7.1□□□□□ -1.27
CPSF7-213ENST00000494016 MRE11P49959 708 aa7.1□□□□□ -1.27
CPSF7-213ENST00000494016 EHHADHQ08426 723 aa7.1□□□□□ -1.27
CPSF7-213ENST00000494016 ANKRD1Q15327 319 aa7.1□□□□□ -1.27
CPSF7-213ENST00000494016 TXNRD1Q16881 649 aa7.1□□□□□ -1.27
CPSF7-213ENST00000494016 ZNF827Q17R98 1081 aa7.1□□□□□ -1.27
CPSF7-213ENST00000494016 PARP10Q53GL7 1025 aa7.1□□□□□ -1.27
CPSF7-213ENST00000494016 GORABQ5T7V8 394 aa7.1□□□□□ -1.27
CPSF7-213ENST00000494016 TTC39BQ5VTQ0 682 aaPredicted RBP7.1□□□□□ -1.27
CPSF7-213ENST00000494016 TTLL5Q6EMB2 1281 aa7.1□□□□□ -1.27
CPSF7-213ENST00000494016 PI16Q6UXB8 463 aa7.1□□□□□ -1.27
CPSF7-213ENST00000494016 Q6ZUG5 572 aa7.1□□□□□ -1.27
CPSF7-213ENST00000494016 ZNF438Q7Z4V0 828 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms