RNA–Protein interactions for RNA: ENST00000493923.1

HDAC6-234, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 404 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-234ENST00000493923 FAM227BQ96M60 508 aa9.62□□□□□ -0.87
HDAC6-234ENST00000493923 SLF1Q9BQI6 1058 aa9.62□□□□□ -0.87
HDAC6-234ENST00000493923 SENP6Q9GZR1 1112 aaPredicted RBP9.62□□□□□ -0.87
HDAC6-234ENST00000493923 MROH8Q9H579 483 aa9.62□□□□□ -0.87
HDAC6-234ENST00000493923 SH2D4AQ9H788 454 aa9.62□□□□□ -0.87
HDAC6-234ENST00000493923 GOPCQ9HD26 462 aa9.62□□□□□ -0.87
HDAC6-234ENST00000493923 MTMR4Q9NYA4 1195 aa9.62□□□□□ -0.87
HDAC6-234ENST00000493923 DDX52Q9Y2R4 599 aaKnown RBP eCLIP9.62□□□□□ -0.87
HDAC6-234ENST00000493923 DDX49Q9Y6V7 483 aaKnown RBP9.62□□□□□ -0.87
HDAC6-234ENST00000493923 A0A0C4DFX4 3053 aa9.62□□□□□ -0.87
HDAC6-234ENST00000493923 LTBP2Q14767 1821 aa9.61□□□□□ -0.87
HDAC6-234ENST00000493923 LCTP09848 1927 aa9.61□□□□□ -0.87
HDAC6-234ENST00000493923 STRNO43815 780 aa9.61□□□□□ -0.87
HDAC6-234ENST00000493923 ZNF500O60304 480 aaPredicted RBP9.61□□□□□ -0.87
HDAC6-234ENST00000493923 IGHDP01880 384 aa9.61□□□□□ -0.87
HDAC6-234ENST00000493923 CAPN2P17655 700 aa9.61□□□□□ -0.87
HDAC6-234ENST00000493923 SNAP25P60880 206 aa9.61□□□□□ -0.87
HDAC6-234ENST00000493923 MDM2Q00987 491 aaPredicted RBP9.61□□□□□ -0.87
HDAC6-234ENST00000493923 TFAP4Q01664 338 aa9.61□□□□□ -0.87
HDAC6-234ENST00000493923 ZNF589Q86UQ0 364 aaPredicted RBP9.61□□□□□ -0.87
HDAC6-234ENST00000493923 NEDD1Q8NHV4 660 aa9.61□□□□□ -0.87
HDAC6-234ENST00000493923 MKL1Q969V6 931 aa9.61□□□□□ -0.87
HDAC6-234ENST00000493923 MMP19Q99542 508 aa9.61□□□□□ -0.87
HDAC6-234ENST00000493923 RAVER2Q9HCJ3 691 aaKnown RBP9.61□□□□□ -0.87
HDAC6-234ENST00000493923 IL17RBQ9NRM6 502 aa9.61□□□□□ -0.87
HDAC6-234ENST00000493923 CIZ1Q9ULV3 898 aaPredicted RBP9.61□□□□□ -0.87
HDAC6-234ENST00000493923 CUL9Q8IWT3 2517 aa9.61□□□□□ -0.87
HDAC6-234ENST00000493923 PLIN4Q96Q06 1357 aa9.61□□□□□ -0.87
HDAC6-234ENST00000493923 ERC2O15083 957 aa9.6□□□□□ -0.87
HDAC6-234ENST00000493923 SEPT4O43236 478 aa9.6□□□□□ -0.87
HDAC6-234ENST00000493923 ADCY6O43306 1168 aa9.6□□□□□ -0.87
HDAC6-234ENST00000493923 SLC25A27O95847 323 aa9.6□□□□□ -0.87
HDAC6-234ENST00000493923 ZNF865P0CJ78 1059 aaPredicted RBP9.6□□□□□ -0.87
HDAC6-234ENST00000493923 FCER1AP12319 257 aa9.6□□□□□ -0.87
HDAC6-234ENST00000493923 GNAT2P19087 354 aa9.6□□□□□ -0.87
HDAC6-234ENST00000493923 PTGS1P23219 599 aa9.6□□□□□ -0.87
HDAC6-234ENST00000493923 RTP1P59025 263 aa9.6□□□□□ -0.87
HDAC6-234ENST00000493923 HDAC1Q13547 482 aaPredicted RBP9.6□□□□□ -0.87
HDAC6-234ENST00000493923 LRRC41Q15345 812 aa9.6□□□□□ -0.87
HDAC6-234ENST00000493923 SLFN13Q68D06 897 aa9.6□□□□□ -0.87
HDAC6-234ENST00000493923 SNRNP48Q6IEG0 339 aaKnown RBP9.6□□□□□ -0.87
HDAC6-234ENST00000493923 ABRAQ8N0Z2 381 aa9.6□□□□□ -0.87
HDAC6-234ENST00000493923 CPXCR1Q8N123 301 aa9.6□□□□□ -0.87
HDAC6-234ENST00000493923 FERMT2Q96AC1 680 aa9.6□□□□□ -0.87
HDAC6-234ENST00000493923 KIFC2Q96AC6 838 aa9.6□□□□□ -0.87
HDAC6-234ENST00000493923 GBP4Q96PP9 640 aa9.6□□□□□ -0.87
HDAC6-234ENST00000493923 PANK2Q9BZ23 570 aa9.6□□□□□ -0.87
HDAC6-234ENST00000493923 LNPKQ9C0E8 428 aa9.6□□□□□ -0.87
HDAC6-234ENST00000493923 ZNF536O15090 1300 aa9.59□□□□□ -0.87
HDAC6-234ENST00000493923 DNAJC25-GNG10A0A024R161 153 aa9.59□□□□□ -0.87
HDAC6-234ENST00000493923 MYADML2A6NDP7 307 aa9.59□□□□□ -0.87
HDAC6-234ENST00000493923 SNAI1O95863 264 aaPredicted RBP9.59□□□□□ -0.87
HDAC6-234ENST00000493923 PGK1P00558 417 aa9.59□□□□□ -0.87
HDAC6-234ENST00000493923 BMP8BP34820 402 aa9.59□□□□□ -0.87
HDAC6-234ENST00000493923 ADCYAP1R1P41586 468 aa9.59□□□□□ -0.87
HDAC6-234ENST00000493923 NMIQ13287 307 aaPredicted RBP9.59□□□□□ -0.87
HDAC6-234ENST00000493923 PPP4R3BQ5MIZ7 849 aa9.59□□□□□ -0.87
HDAC6-234ENST00000493923 SASS6Q6UVJ0 657 aa9.59□□□□□ -0.87
HDAC6-234ENST00000493923 Q7L0L9 218 aa9.59□□□□□ -0.87
HDAC6-234ENST00000493923 SH3RF1Q7Z6J0 888 aa9.59□□□□□ -0.87
HDAC6-234ENST00000493923 ZNF444Q8N0Y2 327 aaPredicted RBP9.59□□□□□ -0.87
HDAC6-234ENST00000493923 TINF2Q9BSI4 451 aa9.59□□□□□ -0.87
HDAC6-234ENST00000493923 NAPBQ9H115 298 aa9.59□□□□□ -0.87
HDAC6-234ENST00000493923 SLC38A10Q9HBR0 1119 aa9.59□□□□□ -0.87
HDAC6-234ENST00000493923 TMEM232C9JQI7 657 aa9.58□□□□□ -0.88
HDAC6-234ENST00000493923 DNM1LO00429 736 aa9.58□□□□□ -0.88
HDAC6-234ENST00000493923 TTLL1O95922 423 aa9.58□□□□□ -0.88
HDAC6-234ENST00000493923 TSPY3P0CV98 308 aa9.58□□□□□ -0.88
HDAC6-234ENST00000493923 TSPY8P0CW00 308 aa9.58□□□□□ -0.88
HDAC6-234ENST00000493923 CDK11BP21127 795 aaKnown RBP9.58□□□□□ -0.88
HDAC6-234ENST00000493923 MCCP23508 829 aa9.58□□□□□ -0.88
HDAC6-234ENST00000493923 ITGB8P26012 769 aa9.58□□□□□ -0.88
HDAC6-234ENST00000493923 CNTN2Q02246 1040 aa9.58□□□□□ -0.88
HDAC6-234ENST00000493923 TRIM60Q495X7 471 aa9.58□□□□□ -0.88
HDAC6-234ENST00000493923 TTBK2Q6IQ55 1244 aa9.58□□□□□ -0.88
HDAC6-234ENST00000493923 SLC39A5Q6ZMH5 540 aa9.58□□□□□ -0.88
HDAC6-234ENST00000493923 KCTD1Q719H9 257 aa9.58□□□□□ -0.88
HDAC6-234ENST00000493923 PRPF38AQ8NAV1 312 aaKnown RBP9.58□□□□□ -0.88
HDAC6-234ENST00000493923 GMCL1P1Q8NEA9 526 aa9.58□□□□□ -0.88
HDAC6-234ENST00000493923 AGBL1Q96MI9 1066 aa9.58□□□□□ -0.88
HDAC6-234ENST00000493923 TEX13BQ9BXU2 312 aa9.58□□□□□ -0.88
HDAC6-234ENST00000493923 FAM13BQ9NYF5 915 aa9.58□□□□□ -0.88
HDAC6-234ENST00000493923 MTMR7Q9Y216 660 aa9.58□□□□□ -0.88
HDAC6-234ENST00000493923 ATP11BQ9Y2G3 1177 aa9.58□□□□□ -0.88
HDAC6-234ENST00000493923 ASTN1O14525 1302 aa9.57□□□□□ -0.88
HDAC6-234ENST00000493923 LRRC37A2A6NM11 1700 aa9.57□□□□□ -0.88
HDAC6-234ENST00000493923 UQCRHLA0A096LP55 91 aa9.57□□□□□ -0.88
HDAC6-234ENST00000493923 A0A1W2PPC1 479 aa9.57□□□□□ -0.88
HDAC6-234ENST00000493923 TRIM43BA6NCK2 446 aa9.57□□□□□ -0.88
HDAC6-234ENST00000493923 ATP2A1O14983 1001 aa9.57□□□□□ -0.88
HDAC6-234ENST00000493923 MSCO60682 206 aa9.57□□□□□ -0.88
HDAC6-234ENST00000493923 ADAMTS4O75173 837 aa9.57□□□□□ -0.88
HDAC6-234ENST00000493923 FGAP02671 866 aa9.57□□□□□ -0.88
HDAC6-234ENST00000493923 UQCRHP07919 91 aa9.57□□□□□ -0.88
HDAC6-234ENST00000493923 BMP3P12645 472 aa9.57□□□□□ -0.88
HDAC6-234ENST00000493923 HAND2P61296 217 aa9.57□□□□□ -0.88
HDAC6-234ENST00000493923 KCTD2Q14681 263 aa9.57□□□□□ -0.88
HDAC6-234ENST00000493923 ALX1Q15699 326 aa9.57□□□□□ -0.88
HDAC6-234ENST00000493923 TMEM63BQ5T3F8 832 aa9.57□□□□□ -0.88
HDAC6-234ENST00000493923 TBC1D10CQ8IV04 446 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms