RNA–Protein interactions for RNA: ENST00000493601.5

PTPRU-208, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 5

Gene PTPRU, Length 695 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-208ENST00000493601 ACVR2BQ13705 512 aa19.67■□□□□ 0.74
PTPRU-208ENST00000493601 ALX1Q15699 326 aa19.67■□□□□ 0.74
PTPRU-208ENST00000493601 TKFCQ3LXA3 575 aa19.67■□□□□ 0.74
PTPRU-208ENST00000493601 VPS53Q5VIR6 699 aa19.67■□□□□ 0.74
PTPRU-208ENST00000493601 ARMCX2Q7L311 632 aa19.67■□□□□ 0.74
PTPRU-208ENST00000493601 NUP133Q8WUM0 1156 aa19.67■□□□□ 0.74
PTPRU-208ENST00000493601 BADQ92934 168 aa19.67■□□□□ 0.74
PTPRU-208ENST00000493601 FGD4Q96M96 766 aa19.67■□□□□ 0.74
PTPRU-208ENST00000493601 IL17RBQ9NRM6 502 aa19.67■□□□□ 0.74
PTPRU-208ENST00000493601 MTMR10Q9NXD2 777 aa19.67■□□□□ 0.74
PTPRU-208ENST00000493601 TACC3Q9Y6A5 838 aa19.67■□□□□ 0.74
PTPRU-208ENST00000493601 LRRC37A2A6NM11 1700 aa19.66■□□□□ 0.74
PTPRU-208ENST00000493601 TRIM43BA6NCK2 446 aa19.66■□□□□ 0.74
PTPRU-208ENST00000493601 NMT2O60551 498 aa19.66■□□□□ 0.74
PTPRU-208ENST00000493601 ACLYP53396 1101 aa19.66■□□□□ 0.74
PTPRU-208ENST00000493601 FAM109BQ6ICB4 259 aaPredicted RBP19.66■□□□□ 0.74
PTPRU-208ENST00000493601 RCSD1Q6JBY9 416 aa19.66■□□□□ 0.74
PTPRU-208ENST00000493601 SH3RF1Q7Z6J0 888 aa19.66■□□□□ 0.74
PTPRU-208ENST00000493601 TRIM43Q96BQ3 446 aaPredicted RBP19.66■□□□□ 0.74
PTPRU-208ENST00000493601 RNF146Q9NTX7 359 aa19.66■□□□□ 0.74
PTPRU-208ENST00000493601 STXBP5LQ9Y2K9 1186 aa19.66■□□□□ 0.74
PTPRU-208ENST00000493601 A0A0D9SFI3 127 aa19.65■□□□□ 0.74
PTPRU-208ENST00000493601 PQBP1O60828 265 aaKnown RBP19.65■□□□□ 0.74
PTPRU-208ENST00000493601 CST5P28325 142 aaPredicted RBP19.65■□□□□ 0.74
PTPRU-208ENST00000493601 CCDC144BQ3MJ40 725 aa19.65■□□□□ 0.74
PTPRU-208ENST00000493601 MCMDC2Q4G0Z9 681 aa19.65■□□□□ 0.74
PTPRU-208ENST00000493601 KCTD1Q719H9 257 aa19.65■□□□□ 0.74
PTPRU-208ENST00000493601 CCDC144CPQ8IYA2 1237 aa19.65■□□□□ 0.74
PTPRU-208ENST00000493601 SLC17A8Q8NDX2 589 aa19.65■□□□□ 0.74
PTPRU-208ENST00000493601 KLHDC9Q8NEP7 349 aa19.65■□□□□ 0.74
PTPRU-208ENST00000493601 CHMP4CQ96CF2 233 aa19.65■□□□□ 0.74
PTPRU-208ENST00000493601 FAM227BQ96M60 508 aa19.65■□□□□ 0.74
PTPRU-208ENST00000493601 AGBL1Q96MI9 1066 aa19.65■□□□□ 0.74
PTPRU-208ENST00000493601 SPC25Q9HBM1 224 aa19.65■□□□□ 0.74
PTPRU-208ENST00000493601 A1CFQ9NQ94 594 aaKnown RBP19.65■□□□□ 0.74
PTPRU-208ENST00000493601 INCENPQ9NQS7 918 aa19.65■□□□□ 0.74
PTPRU-208ENST00000493601 STARD7Q9NQZ5 370 aa19.65■□□□□ 0.74
PTPRU-208ENST00000493601 TOMM22Q9NS69 142 aa19.65■□□□□ 0.74
PTPRU-208ENST00000493601 ZNF536O15090 1300 aa19.65■□□□□ 0.74
PTPRU-208ENST00000493601 ZMYM6O95789 1325 aa19.65■□□□□ 0.74
PTPRU-208ENST00000493601 POTEB2H3BUK9 544 aa19.64■□□□□ 0.73
PTPRU-208ENST00000493601 FGRP09769 529 aa19.64■□□□□ 0.73
PTPRU-208ENST00000493601 NOVP48745 357 aa19.64■□□□□ 0.73
PTPRU-208ENST00000493601 KCNA10Q16322 511 aa19.64■□□□□ 0.73
PTPRU-208ENST00000493601 CCDC96Q2M329 555 aa19.64■□□□□ 0.73
PTPRU-208ENST00000493601 ANKRD33Q7Z3H0 272 aa19.64■□□□□ 0.73
PTPRU-208ENST00000493601 FAM133AQ8N9E0 248 aa19.64■□□□□ 0.73
PTPRU-208ENST00000493601 PCSK9Q8NBP7 692 aaKnown RBP19.64■□□□□ 0.73
PTPRU-208ENST00000493601 DCAF4Q8WV16 495 aa19.64■□□□□ 0.73
PTPRU-208ENST00000493601 TOX2Q96NM4 488 aa19.64■□□□□ 0.73
PTPRU-208ENST00000493601 TRERF1Q96PN7 1200 aa19.64■□□□□ 0.73
PTPRU-208ENST00000493601 UPF3AQ9H1J1 476 aaKnown RBP19.64■□□□□ 0.73
PTPRU-208ENST00000493601 MROH7Q68CQ1 1323 aa19.63■□□□□ 0.73
PTPRU-208ENST00000493601 ASB14A6NK59 587 aa19.63■□□□□ 0.73
PTPRU-208ENST00000493601 DCDC2CA8MYV0 355 aa19.63■□□□□ 0.73
PTPRU-208ENST00000493601 KIAA0355O15063 1070 aa19.63■□□□□ 0.73
PTPRU-208ENST00000493601 C6orf222P0C671 652 aaPredicted RBP19.63■□□□□ 0.73
PTPRU-208ENST00000493601 ALAS1P13196 640 aa19.63■□□□□ 0.73
PTPRU-208ENST00000493601 CNTN2Q02246 1040 aa19.63■□□□□ 0.73
PTPRU-208ENST00000493601 SHHQ15465 462 aa19.63■□□□□ 0.73
PTPRU-208ENST00000493601 CCSAPQ6IQ19 270 aaPredicted RBP19.63■□□□□ 0.73
PTPRU-208ENST00000493601 CCDC174Q6PII3 467 aa19.63■□□□□ 0.73
PTPRU-208ENST00000493601 GLT1D1Q96MS3 346 aa19.63■□□□□ 0.73
PTPRU-208ENST00000493601 LNPKQ9C0E8 428 aa19.63■□□□□ 0.73
PTPRU-208ENST00000493601 PRR12Q9ULL5 1215 aa19.63■□□□□ 0.73
PTPRU-208ENST00000493601 MTMR7Q9Y216 660 aa19.63■□□□□ 0.73
PTPRU-208ENST00000493601 A0A0C4DFX4 3053 aa19.63■□□□□ 0.73
PTPRU-208ENST00000493601 LAMA4Q16363 1823 aa19.62■□□□□ 0.73
PTPRU-208ENST00000493601 ELP1O95163 1332 aa19.62■□□□□ 0.73
PTPRU-208ENST00000493601 CCDC171Q6TFL3 1326 aa19.62■□□□□ 0.73
PTPRU-208ENST00000493601 MYADML2A6NDP7 307 aa19.62■□□□□ 0.73
PTPRU-208ENST00000493601 TRIM6-TRIM34B2RNG4 842 aa19.62■□□□□ 0.73
PTPRU-208ENST00000493601 ADCY6O43306 1168 aa19.62■□□□□ 0.73
PTPRU-208ENST00000493601 FGAP02671 866 aa19.62■□□□□ 0.73
PTPRU-208ENST00000493601 RAG1P15918 1043 aa19.62■□□□□ 0.73
PTPRU-208ENST00000493601 GJA9P57773 515 aa19.62■□□□□ 0.73
PTPRU-208ENST00000493601 RRP12Q5JTH9 1297 aaKnown RBP19.62■□□□□ 0.73
PTPRU-208ENST00000493601 C9orf50Q5SZB4 431 aa19.62■□□□□ 0.73
PTPRU-208ENST00000493601 RASGRP2Q7LDG7 609 aa19.62■□□□□ 0.73
PTPRU-208ENST00000493601 TMEM39AQ9NV64 488 aa19.62■□□□□ 0.73
PTPRU-208ENST00000493601 CCPG1Q9ULG6 757 aa19.62■□□□□ 0.73
PTPRU-208ENST00000493601 LCTP09848 1927 aa19.61■□□□□ 0.73
PTPRU-208ENST00000493601 ICAM1P05362 532 aa19.61■□□□□ 0.73
PTPRU-208ENST00000493601 HSPD1P10809 573 aaKnown RBP19.61■□□□□ 0.73
PTPRU-208ENST00000493601 TOP1P11387 765 aaKnown RBP19.61■□□□□ 0.73
PTPRU-208ENST00000493601 PCP11498 1178 aaKnown RBP19.61■□□□□ 0.73
PTPRU-208ENST00000493601 MFAP1P55081 439 aaKnown RBP19.61■□□□□ 0.73
PTPRU-208ENST00000493601 NMIQ13287 307 aaPredicted RBP19.61■□□□□ 0.73
PTPRU-208ENST00000493601 ZNF697Q5TEC3 545 aa19.61■□□□□ 0.73
PTPRU-208ENST00000493601 ZNF589Q86UQ0 364 aaPredicted RBP19.61■□□□□ 0.73
PTPRU-208ENST00000493601 KATNBL1Q9H079 304 aa19.61■□□□□ 0.73
PTPRU-208ENST00000493601 RWDD1Q9H446 243 aaPredicted RBP19.61■□□□□ 0.73
PTPRU-208ENST00000493601 ASGR1P07306 291 aa19.6■□□□□ 0.73
PTPRU-208ENST00000493601 ITGB8P26012 769 aa19.6■□□□□ 0.73
PTPRU-208ENST00000493601 SNAP25P60880 206 aa19.6■□□□□ 0.73
PTPRU-208ENST00000493601 FAAP100Q0VG06 881 aa19.6■□□□□ 0.73
PTPRU-208ENST00000493601 SMC5Q8IY18 1101 aa19.6■□□□□ 0.73
PTPRU-208ENST00000493601 RILPL2Q969X0 211 aa19.6■□□□□ 0.73
PTPRU-208ENST00000493601 TCP11L1Q9NUJ3 509 aa19.6■□□□□ 0.73
PTPRU-208ENST00000493601 CYP39A1Q9NYL5 469 aa19.6■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms