RNA–Protein interactions for RNA: ENST00000493348.1

TM4SF1-204, Transcript of transmembrane 4 L six family member 1, humanhuman

TSL 2

Gene TM4SF1, Length 976 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1-204ENST00000493348 LY9Q9HBG7 655 aa9.46□□□□□ -0.9
TM4SF1-204ENST00000493348 SLC38A10Q9HBR0 1119 aa9.46□□□□□ -0.9
TM4SF1-204ENST00000493348 RAVER2Q9HCJ3 691 aaKnown RBP9.46□□□□□ -0.9
TM4SF1-204ENST00000493348 VAT1LQ9HCJ6 419 aa9.46□□□□□ -0.9
TM4SF1-204ENST00000493348 TXNRD2Q9NNW7 524 aa9.46□□□□□ -0.9
TM4SF1-204ENST00000493348 HOMER2Q9NSB8 354 aa9.46□□□□□ -0.9
TM4SF1-204ENST00000493348 PDRG1Q9NUG6 133 aa9.46□□□□□ -0.9
TM4SF1-204ENST00000493348 RBM28Q9NW13 759 aaKnown RBP9.46□□□□□ -0.9
TM4SF1-204ENST00000493348 SEC63Q9UGP8 760 aaKnown RBP9.46□□□□□ -0.9
TM4SF1-204ENST00000493348 CCPG1Q9ULG6 757 aa9.46□□□□□ -0.9
TM4SF1-204ENST00000493348 PRR12Q9ULL5 1215 aa9.46□□□□□ -0.9
TM4SF1-204ENST00000493348 PTPN22Q9Y2R2 807 aa9.46□□□□□ -0.9
TM4SF1-204ENST00000493348 BAZ2BQ9UIF8 2168 aaKnown RBP9.46□□□□□ -0.9
TM4SF1-204ENST00000493348 ZSWIM8A7E2V4 1837 aa9.45□□□□□ -0.9
TM4SF1-204ENST00000493348 KLF18A0A0U1RQI7 1052 aa9.45□□□□□ -0.9
TM4SF1-204ENST00000493348 SLC15A5A6NIM6 579 aa9.45□□□□□ -0.9
TM4SF1-204ENST00000493348 GOLGA8AA7E2F4 631 aa9.45□□□□□ -0.9
TM4SF1-204ENST00000493348 GOLGA8BA8MQT2 603 aa9.45□□□□□ -0.9
TM4SF1-204ENST00000493348 CNMDO75829 334 aa9.45□□□□□ -0.9
TM4SF1-204ENST00000493348 SNHG28P0DPA3 235 aa9.45□□□□□ -0.9
TM4SF1-204ENST00000493348 PRKCZQ05513 592 aa9.45□□□□□ -0.9
TM4SF1-204ENST00000493348 GRM4Q14833 912 aa9.45□□□□□ -0.9
TM4SF1-204ENST00000493348 ANKRD1Q15327 319 aa9.45□□□□□ -0.9
TM4SF1-204ENST00000493348 TTBK2Q6IQ55 1244 aa9.45□□□□□ -0.9
TM4SF1-204ENST00000493348 BTNL9Q6UXG8 535 aa9.45□□□□□ -0.9
TM4SF1-204ENST00000493348 SLAIN1Q8ND83 568 aa9.45□□□□□ -0.9
TM4SF1-204ENST00000493348 CHST13Q8NET6 341 aa9.45□□□□□ -0.9
TM4SF1-204ENST00000493348 KCNB2Q92953 911 aa9.45□□□□□ -0.9
TM4SF1-204ENST00000493348 TCEANC2Q96MN5 208 aa9.45□□□□□ -0.9
TM4SF1-204ENST00000493348 TRERF1Q96PN7 1200 aa9.45□□□□□ -0.9
TM4SF1-204ENST00000493348 MAP3K14Q99558 947 aa9.45□□□□□ -0.9
TM4SF1-204ENST00000493348 TM6SF1Q9BZW5 370 aa9.45□□□□□ -0.9
TM4SF1-204ENST00000493348 UBA5Q9GZZ9 404 aa9.45□□□□□ -0.9
TM4SF1-204ENST00000493348 PORCNQ9H237 461 aa9.45□□□□□ -0.9
TM4SF1-204ENST00000493348 ACAD9Q9H845 621 aa9.45□□□□□ -0.9
TM4SF1-204ENST00000493348 PLXNA1Q9UIW2 1896 aa9.45□□□□□ -0.9
TM4SF1-204ENST00000493348 ATP2A1O14983 1001 aa9.44□□□□□ -0.9
TM4SF1-204ENST00000493348 ADCY3O60266 1144 aa9.44□□□□□ -0.9
TM4SF1-204ENST00000493348 PEX10O60683 326 aa9.44□□□□□ -0.9
TM4SF1-204ENST00000493348 ICAM1P05362 532 aa9.44□□□□□ -0.9
TM4SF1-204ENST00000493348 PRKAR2AP13861 404 aaKnown RBP9.44□□□□□ -0.9
TM4SF1-204ENST00000493348 CYP2B6P20813 491 aa9.44□□□□□ -0.9
TM4SF1-204ENST00000493348 FLT3LGP49771 235 aa9.44□□□□□ -0.9
TM4SF1-204ENST00000493348 METAP2P50579 478 aaKnown RBP eCLIP9.44□□□□□ -0.9
TM4SF1-204ENST00000493348 EXOSC10Q01780 885 aaKnown RBP9.44□□□□□ -0.9
TM4SF1-204ENST00000493348 AKAP17AQ02040 695 aaKnown RBP9.44□□□□□ -0.9
TM4SF1-204ENST00000493348 PPP2R5BQ15173 497 aa9.44□□□□□ -0.9
TM4SF1-204ENST00000493348 CDC37Q16543 378 aaPredicted RBP9.44□□□□□ -0.9
TM4SF1-204ENST00000493348 RTN1Q16799 776 aa9.44□□□□□ -0.9
TM4SF1-204ENST00000493348 USH1GQ495M9 461 aa9.44□□□□□ -0.9
TM4SF1-204ENST00000493348 C8orf34Q49A92 452 aa9.44□□□□□ -0.9
TM4SF1-204ENST00000493348 CPLX2Q6PUV4 134 aaKnown RBP9.44□□□□□ -0.9
TM4SF1-204ENST00000493348 RASGRP2Q7LDG7 609 aa9.44□□□□□ -0.9
TM4SF1-204ENST00000493348 SGMS1Q86VZ5 419 aa9.44□□□□□ -0.9
TM4SF1-204ENST00000493348 FBXO11Q86XK2 927 aa9.44□□□□□ -0.9
TM4SF1-204ENST00000493348 HOMER1Q86YM7 354 aa9.44□□□□□ -0.9
TM4SF1-204ENST00000493348 CCDC144CPQ8IYA2 1237 aa9.44□□□□□ -0.9
TM4SF1-204ENST00000493348 ADGRF4Q8IZF3 695 aa9.44□□□□□ -0.9
TM4SF1-204ENST00000493348 ABRAQ8N0Z2 381 aa9.44□□□□□ -0.9
TM4SF1-204ENST00000493348 NKX2-3Q8TAU0 364 aa9.44□□□□□ -0.9
TM4SF1-204ENST00000493348 BRF1Q92994 677 aa9.44□□□□□ -0.9
TM4SF1-204ENST00000493348 RRP36Q96EU6 259 aaKnown RBP9.44□□□□□ -0.9
TM4SF1-204ENST00000493348 MPHOSPH6Q99547 160 aaKnown RBP9.44□□□□□ -0.9
TM4SF1-204ENST00000493348 MYL10Q9BUA6 226 aa9.44□□□□□ -0.9
TM4SF1-204ENST00000493348 C22orf23Q9BZE7 217 aa9.44□□□□□ -0.9
TM4SF1-204ENST00000493348 RANBP17Q9H2T7 1088 aaKnown RBP9.44□□□□□ -0.9
TM4SF1-204ENST00000493348 RNF146Q9NTX7 359 aa9.44□□□□□ -0.9
TM4SF1-204ENST00000493348 MAD2L2Q9UI95 211 aa9.44□□□□□ -0.9
TM4SF1-204ENST00000493348 ADAMTS5Q9UNA0 930 aa9.44□□□□□ -0.9
TM4SF1-204ENST00000493348 PTCH2Q9Y6C5 1203 aa9.44□□□□□ -0.9
TM4SF1-204ENST00000493348 PFASO15067 1338 aa9.43□□□□□ -0.9
TM4SF1-204ENST00000493348 ABCB11O95342 1321 aa9.43□□□□□ -0.9
TM4SF1-204ENST00000493348 PTPDC1A2A3K4 754 aa9.43□□□□□ -0.9
TM4SF1-204ENST00000493348 B4DLN1 442 aa9.43□□□□□ -0.9
TM4SF1-204ENST00000493348 CPLX1O14810 134 aa9.43□□□□□ -0.9
TM4SF1-204ENST00000493348 CPA1P15085 419 aa9.43□□□□□ -0.9
TM4SF1-204ENST00000493348 PTPREP23469 700 aa9.43□□□□□ -0.9
TM4SF1-204ENST00000493348 ADORA2AP29274 412 aa9.43□□□□□ -0.9
TM4SF1-204ENST00000493348 GRK4P32298 578 aa9.43□□□□□ -0.9
TM4SF1-204ENST00000493348 MRPL12P52815 198 aaKnown RBP9.43□□□□□ -0.9
TM4SF1-204ENST00000493348 RCAN1P53805 252 aa9.43□□□□□ -0.9
TM4SF1-204ENST00000493348 SNAP25P60880 206 aa9.43□□□□□ -0.9
TM4SF1-204ENST00000493348 APOBRQ0VD83 1088 aa9.43□□□□□ -0.9
TM4SF1-204ENST00000493348 TROAPQ12815 778 aa9.43□□□□□ -0.9
TM4SF1-204ENST00000493348 MAP2K5Q13163 448 aa9.43□□□□□ -0.9
TM4SF1-204ENST00000493348 MFSD14CQ5VZR4 134 aa9.43□□□□□ -0.9
TM4SF1-204ENST00000493348 APOA5Q6Q788 366 aa9.43□□□□□ -0.9
TM4SF1-204ENST00000493348 NSMFQ6X4W1 530 aa9.43□□□□□ -0.9
TM4SF1-204ENST00000493348 MCF2L2Q86YR7 1114 aa9.43□□□□□ -0.9
TM4SF1-204ENST00000493348 FANCBQ8NB91 859 aa9.43□□□□□ -0.9
TM4SF1-204ENST00000493348 AGBL1Q96MI9 1066 aa9.43□□□□□ -0.9
TM4SF1-204ENST00000493348 APBA2Q99767 749 aa9.43□□□□□ -0.9
TM4SF1-204ENST00000493348 TMEM106CQ9BVX2 250 aa9.43□□□□□ -0.9
TM4SF1-204ENST00000493348 AMNQ9BXJ7 453 aa9.43□□□□□ -0.9
TM4SF1-204ENST00000493348 UPF3BQ9BZI7 483 aaKnown RBP9.43□□□□□ -0.9
TM4SF1-204ENST00000493348 ZSWIM6Q9HCJ5 1215 aa9.43□□□□□ -0.9
TM4SF1-204ENST00000493348 ZNF214Q9UL59 606 aaPredicted RBP9.43□□□□□ -0.9
TM4SF1-204ENST00000493348 MRPL11Q9Y3B7 192 aaKnown RBP9.43□□□□□ -0.9
TM4SF1-204ENST00000493348 PALM3A6NDB9 673 aaPredicted RBP9.42□□□□□ -0.9
TM4SF1-204ENST00000493348 CCDC85CA6NKD9 419 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms