RNA–Protein interactions for RNA: ENST00000493232.5

BRAT1-206, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 2

Gene BRAT1, Length 5,360 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-206ENST00000493232 KDM5AP29375 1690 aaKnown RBP17.92■□□□□ 0.46
BRAT1-206ENST00000493232 TMOD1P28289 359 aa17.92■□□□□ 0.46
BRAT1-206ENST00000493232 INPP5BP32019 993 aa17.92■□□□□ 0.46
BRAT1-206ENST00000493232 CABS1Q96KC9 395 aa17.92■□□□□ 0.46
BRAT1-206ENST00000493232 CUEDC2Q9H467 287 aa17.92■□□□□ 0.46
BRAT1-206ENST00000493232 ZNF277Q9NRM2 450 aaPredicted RBP17.92■□□□□ 0.46
BRAT1-206ENST00000493232 POLR2BP30876 1174 aaKnown RBP17.92■□□□□ 0.46
BRAT1-206ENST00000493232 RBM6P78332 1123 aaKnown RBP17.92■□□□□ 0.46
BRAT1-206ENST00000493232 RASSF4Q9H2L5 321 aa17.92■□□□□ 0.46
BRAT1-206ENST00000493232 RTEL1Q9NZ71 1219 aa17.92■□□□□ 0.46
BRAT1-206ENST00000493232 TTLL3Q9Y4R7 772 aa17.92■□□□□ 0.46
BRAT1-206ENST00000493232 ABCB5Q2M3G0 1257 aa17.91■□□□□ 0.46
BRAT1-206ENST00000493232 FAM26FQ5R3K3 315 aa17.91■□□□□ 0.46
BRAT1-206ENST00000493232 GPATCH4Q5T3I0 446 aaKnown RBP17.91■□□□□ 0.46
BRAT1-206ENST00000493232 PSDA5PKW4 1024 aaPredicted RBP17.91■□□□□ 0.46
BRAT1-206ENST00000493232 GSPT1P15170 499 aaKnown RBP17.91■□□□□ 0.46
BRAT1-206ENST00000493232 ADD1P35611 737 aaKnown RBP17.91■□□□□ 0.46
BRAT1-206ENST00000493232 FAM47CQ5HY64 1035 aa17.91■□□□□ 0.46
BRAT1-206ENST00000493232 DCPSQ96C86 337 aaKnown RBP17.91■□□□□ 0.46
BRAT1-206ENST00000493232 EPSTI1Q96J88 318 aa17.91■□□□□ 0.46
BRAT1-206ENST00000493232 BCAP29Q9UHQ4 241 aa17.91■□□□□ 0.46
BRAT1-206ENST00000493232 TPCN1Q9ULQ1 816 aa17.91■□□□□ 0.46
BRAT1-206ENST00000493232 TRAPPC10P48553 1259 aa17.91■□□□□ 0.46
BRAT1-206ENST00000493232 BIRC2Q13490 618 aa17.91■□□□□ 0.46
BRAT1-206ENST00000493232 BRD3Q15059 726 aa17.91■□□□□ 0.46
BRAT1-206ENST00000493232 LRRC24Q50LG9 513 aa17.91■□□□□ 0.46
BRAT1-206ENST00000493232 ZMYND15Q9H091 742 aa17.91■□□□□ 0.46
BRAT1-206ENST00000493232 LOC102724428A0A0B4J2F2 783 aa17.9■□□□□ 0.46
BRAT1-206ENST00000493232 SCNN1DP51172 638 aa17.9■□□□□ 0.46
BRAT1-206ENST00000493232 SIK1P57059 783 aa17.9■□□□□ 0.46
BRAT1-206ENST00000493232 ASPRV1Q53RT3 343 aa17.9■□□□□ 0.46
BRAT1-206ENST00000493232 ANKRD20A3Q5VUR7 823 aa17.9■□□□□ 0.46
BRAT1-206ENST00000493232 ARMCX5Q6P1M9 558 aa17.9■□□□□ 0.46
BRAT1-206ENST00000493232 SULF1Q8IWU6 871 aa17.9■□□□□ 0.46
BRAT1-206ENST00000493232 PALM2Q8IXS6 379 aa17.9■□□□□ 0.46
BRAT1-206ENST00000493232 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.9■□□□□ 0.46
BRAT1-206ENST00000493232 PRPF31Q8WWY3 499 aaKnown RBP17.9■□□□□ 0.46
BRAT1-206ENST00000493232 MTMR6Q9Y217 621 aa17.9■□□□□ 0.46
BRAT1-206ENST00000493232 RGS12O14924 1447 aa17.9■□□□□ 0.46
BRAT1-206ENST00000493232 AATKQ6ZMQ8 1374 aa17.9■□□□□ 0.46
BRAT1-206ENST00000493232 SOS2Q07890 1332 aaPredicted RBP17.9■□□□□ 0.46
BRAT1-206ENST00000493232 CAPN9O14815 690 aa17.9■□□□□ 0.46
BRAT1-206ENST00000493232 RNF40O75150 1001 aa17.9■□□□□ 0.46
BRAT1-206ENST00000493232 RPN1P04843 607 aaKnown RBP17.9■□□□□ 0.46
BRAT1-206ENST00000493232 IL6STP40189 918 aaPredicted RBP17.9■□□□□ 0.46
BRAT1-206ENST00000493232 ADKP55263 362 aaKnown RBP17.9■□□□□ 0.46
BRAT1-206ENST00000493232 CUL4BQ13620 913 aa17.9■□□□□ 0.46
BRAT1-206ENST00000493232 SPATA1Q5VX52 437 aa17.9■□□□□ 0.46
BRAT1-206ENST00000493232 PODXL2Q9NZ53 605 aa17.9■□□□□ 0.46
BRAT1-206ENST00000493232 DDX41Q9UJV9 622 aaKnown RBP17.9■□□□□ 0.46
BRAT1-206ENST00000493232 TMEM232C9JQI7 657 aa17.9■□□□□ 0.46
BRAT1-206ENST00000493232 TMEM191BP0C7N4 346 aa17.9■□□□□ 0.46
BRAT1-206ENST00000493232 RFX1P22670 979 aa17.9■□□□□ 0.46
BRAT1-206ENST00000493232 ARHGEF2Q92974 986 aaKnown RBP17.9■□□□□ 0.46
BRAT1-206ENST00000493232 AMNQ9BXJ7 453 aa17.9■□□□□ 0.46
BRAT1-206ENST00000493232 NUF2Q9BZD4 464 aa17.9■□□□□ 0.46
BRAT1-206ENST00000493232 ABCB4P21439 1286 aa17.9■□□□□ 0.46
BRAT1-206ENST00000493232 GADL1Q6ZQY3 521 aa17.9■□□□□ 0.46
BRAT1-206ENST00000493232 CMTR1Q8N1G2 835 aaKnown RBP17.9■□□□□ 0.46
BRAT1-206ENST00000493232 KRT12Q99456 494 aa17.9■□□□□ 0.46
BRAT1-206ENST00000493232 HAUS4Q9H6D7 363 aa17.9■□□□□ 0.46
BRAT1-206ENST00000493232 CCPG1Q9ULG6 757 aa17.9■□□□□ 0.46
BRAT1-206ENST00000493232 DOK7Q18PE1 504 aa17.9■□□□□ 0.46
BRAT1-206ENST00000493232 TSNAXIP1Q2TAA8 658 aa17.9■□□□□ 0.46
BRAT1-206ENST00000493232 CACYBPQ9HB71 228 aaKnown RBP17.9■□□□□ 0.46
BRAT1-206ENST00000493232 RGS16O15492 202 aaPredicted RBP17.89■□□□□ 0.45
BRAT1-206ENST00000493232 TCP1P17987 556 aaKnown RBP17.89■□□□□ 0.45
BRAT1-206ENST00000493232 TFDP1Q14186 410 aa17.89■□□□□ 0.45
BRAT1-206ENST00000493232 GPIHBP1Q8IV16 184 aa17.89■□□□□ 0.45
BRAT1-206ENST00000493232 GPKOWQ92917 476 aaPredicted RBP eCLIP17.89■□□□□ 0.45
BRAT1-206ENST00000493232 TROVE2P10155 538 aaKnown RBP eCLIP17.89■□□□□ 0.45
BRAT1-206ENST00000493232 MAN1A1P33908 653 aa17.89■□□□□ 0.45
BRAT1-206ENST00000493232 USPL1Q5W0Q7 1092 aa17.89■□□□□ 0.45
BRAT1-206ENST00000493232 CTAGE3PQ8IX95 158 aa17.89■□□□□ 0.45
BRAT1-206ENST00000493232 PCDHA1Q9Y5I3 950 aa17.89■□□□□ 0.45
BRAT1-206ENST00000493232 PCK1P35558 622 aa17.89■□□□□ 0.45
BRAT1-206ENST00000493232 POLGP54098 1239 aaPredicted RBP17.89■□□□□ 0.45
BRAT1-206ENST00000493232 ADAM9Q13443 819 aa17.89■□□□□ 0.45
BRAT1-206ENST00000493232 PPP2R5AQ15172 486 aa17.89■□□□□ 0.45
BRAT1-206ENST00000493232 TMEM63CQ9P1W3 806 aa17.89■□□□□ 0.45
BRAT1-206ENST00000493232 KRIT1O00522 736 aa17.89■□□□□ 0.45
BRAT1-206ENST00000493232 KCNK3O14649 394 aa17.89■□□□□ 0.45
BRAT1-206ENST00000493232 CASQ2O14958 399 aaPredicted RBP17.89■□□□□ 0.45
BRAT1-206ENST00000493232 SEPT6Q14141 434 aa17.89■□□□□ 0.45
BRAT1-206ENST00000493232 GREM2Q9H772 168 aa17.89■□□□□ 0.45
BRAT1-206ENST00000493232 BTBD18B2RXH4 712 aa17.88■□□□□ 0.45
BRAT1-206ENST00000493232 H2AFZP0C0S5 128 aa17.88■□□□□ 0.45
BRAT1-206ENST00000493232 GOLGA8HP0CJ92 632 aa17.88■□□□□ 0.45
BRAT1-206ENST00000493232 BPIFB4P59827 614 aa17.88■□□□□ 0.45
BRAT1-206ENST00000493232 GABPB1Q06547 395 aaPredicted RBP17.88■□□□□ 0.45
BRAT1-206ENST00000493232 H2AFVQ71UI9 128 aa17.88■□□□□ 0.45
BRAT1-206ENST00000493232 BBOF1Q8ND07 529 aa17.88■□□□□ 0.45
BRAT1-206ENST00000493232 RAB3IPQ96QF0 476 aaPredicted RBP17.88■□□□□ 0.45
BRAT1-206ENST00000493232 JPH2Q9BR39 696 aaPredicted RBP17.88■□□□□ 0.45
BRAT1-206ENST00000493232 STAP2Q9UGK3 403 aa17.88■□□□□ 0.45
BRAT1-206ENST00000493232 RNF123Q5XPI4 1314 aa17.88■□□□□ 0.45
BRAT1-206ENST00000493232 A0A1W2PQ27 194 aa17.88■□□□□ 0.45
BRAT1-206ENST00000493232 A0A1W2PQ64 194 aa17.88■□□□□ 0.45
BRAT1-206ENST00000493232 A0A1W2PQD8 194 aa17.88■□□□□ 0.45
BRAT1-206ENST00000493232 PDIA3P30101 505 aaKnown RBP17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms