RNA–Protein interactions for RNA: ENST00000493075.1

LRTM1-202, Transcript of leucine rich repeats and transmembrane domains 1, humanhuman

TSL 1 (best) BASIC

Gene LRTM1, Length 1,318 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1-202ENST00000493075 RARBP10826 455 aa13.54□□□□□ -0.24
LRTM1-202ENST00000493075 AKR1A1P14550 325 aa13.54□□□□□ -0.24
LRTM1-202ENST00000493075 GJC2Q5T442 439 aaPredicted RBP13.54□□□□□ -0.24
LRTM1-202ENST00000493075 TTC22Q5TAA0 569 aa13.54□□□□□ -0.24
LRTM1-202ENST00000493075 DGKHQ86XP1 1220 aa13.54□□□□□ -0.24
LRTM1-202ENST00000493075 TBC1D10CQ8IV04 446 aa13.54□□□□□ -0.24
LRTM1-202ENST00000493075 AGBL1Q96MI9 1066 aa13.54□□□□□ -0.24
LRTM1-202ENST00000493075 ACAD9Q9H845 621 aa13.54□□□□□ -0.24
LRTM1-202ENST00000493075 ISY1Q9ULR0 285 aaKnown RBP13.54□□□□□ -0.24
LRTM1-202ENST00000493075 KBTBD13C9JR72 458 aa13.53□□□□□ -0.24
LRTM1-202ENST00000493075 SNHG28P0DPA3 235 aa13.53□□□□□ -0.24
LRTM1-202ENST00000493075 TAL1P17542 331 aaPredicted RBP13.53□□□□□ -0.24
LRTM1-202ENST00000493075 LRRC41Q15345 812 aa13.53□□□□□ -0.24
LRTM1-202ENST00000493075 ANO1Q5XXA6 986 aa13.53□□□□□ -0.24
LRTM1-202ENST00000493075 ANKS1AQ92625 1134 aa13.53□□□□□ -0.24
LRTM1-202ENST00000493075 TRERF1Q96PN7 1200 aa13.53□□□□□ -0.24
LRTM1-202ENST00000493075 RANBP17Q9H2T7 1088 aaKnown RBP13.53□□□□□ -0.24
LRTM1-202ENST00000493075 PCDH10Q9P2E7 1040 aa13.53□□□□□ -0.24
LRTM1-202ENST00000493075 PNMA2Q9UL42 364 aa13.53□□□□□ -0.24
LRTM1-202ENST00000493075 FAM184BQ9ULE4 1060 aa13.53□□□□□ -0.24
LRTM1-202ENST00000493075 ZMYND8Q9ULU4 1186 aaPredicted RBP13.53□□□□□ -0.24
LRTM1-202ENST00000493075 ICAM1P05362 532 aa13.52□□□□□ -0.25
LRTM1-202ENST00000493075 PDHBP11177 359 aa13.52□□□□□ -0.25
LRTM1-202ENST00000493075 GSPT1P15170 499 aaKnown RBP13.52□□□□□ -0.25
LRTM1-202ENST00000493075 IMMTQ16891 758 aaKnown RBP13.52□□□□□ -0.25
LRTM1-202ENST00000493075 CCDC96Q2M329 555 aa13.52□□□□□ -0.25
LRTM1-202ENST00000493075 C1orf53Q5VUE5 145 aa13.52□□□□□ -0.25
LRTM1-202ENST00000493075 SLC39A5Q6ZMH5 540 aa13.52□□□□□ -0.25
LRTM1-202ENST00000493075 RNF180Q86T96 592 aa13.52□□□□□ -0.25
LRTM1-202ENST00000493075 IQCA1Q86XH1 822 aa13.52□□□□□ -0.25
LRTM1-202ENST00000493075 FAM133AQ8N9E0 248 aa13.52□□□□□ -0.25
LRTM1-202ENST00000493075 FGD4Q96M96 766 aa13.52□□□□□ -0.25
LRTM1-202ENST00000493075 ABHD16BQ9H3Z7 469 aa13.52□□□□□ -0.25
LRTM1-202ENST00000493075 XPNPEP3Q9NQH7 507 aa13.52□□□□□ -0.25
LRTM1-202ENST00000493075 RNF146Q9NTX7 359 aa13.52□□□□□ -0.25
LRTM1-202ENST00000493075 PARP14Q460N5 1801 aa13.51□□□□□ -0.25
LRTM1-202ENST00000493075 POTEB2H3BUK9 544 aa13.51□□□□□ -0.25
LRTM1-202ENST00000493075 ALAS1P13196 640 aa13.51□□□□□ -0.25
LRTM1-202ENST00000493075 IRX6P78412 446 aaPredicted RBP13.51□□□□□ -0.25
LRTM1-202ENST00000493075 ACVR2BQ13705 512 aa13.51□□□□□ -0.25
LRTM1-202ENST00000493075 SYDE2Q5VT97 1194 aa13.51□□□□□ -0.25
LRTM1-202ENST00000493075 TTBK2Q6IQ55 1244 aa13.51□□□□□ -0.25
LRTM1-202ENST00000493075 CCDC174Q6PII3 467 aa13.51□□□□□ -0.25
LRTM1-202ENST00000493075 RUFY2Q8WXA3 655 aa13.51□□□□□ -0.25
LRTM1-202ENST00000493075 CHMP4CQ96CF2 233 aa13.51□□□□□ -0.25
LRTM1-202ENST00000493075 TSEN34Q9BSV6 310 aaKnown RBP13.51□□□□□ -0.25
LRTM1-202ENST00000493075 KRT23Q9C075 422 aa13.51□□□□□ -0.25
LRTM1-202ENST00000493075 A1CFQ9NQ94 594 aaKnown RBP13.51□□□□□ -0.25
LRTM1-202ENST00000493075 HOMER2Q9NSB8 354 aa13.51□□□□□ -0.25
LRTM1-202ENST00000493075 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.51□□□□□ -0.25
LRTM1-202ENST00000493075 PHF24Q9UPV7 400 aa13.51□□□□□ -0.25
LRTM1-202ENST00000493075 MTMR7Q9Y216 660 aa13.51□□□□□ -0.25
LRTM1-202ENST00000493075 RAD50Q92878 1312 aa13.51□□□□□ -0.25
LRTM1-202ENST00000493075 ASB14A6NK59 587 aa13.5□□□□□ -0.25
LRTM1-202ENST00000493075 KDM4AO75164 1064 aa13.5□□□□□ -0.25
LRTM1-202ENST00000493075 DUSP11O75319 330 aaKnown RBP13.5□□□□□ -0.25
LRTM1-202ENST00000493075 SYN1P17600 705 aa13.5□□□□□ -0.25
LRTM1-202ENST00000493075 SLC16A2P36021 539 aa13.5□□□□□ -0.25
LRTM1-202ENST00000493075 ADCYAP1R1P41586 468 aa13.5□□□□□ -0.25
LRTM1-202ENST00000493075 ATN1P54259 1190 aaPredicted RBP13.5□□□□□ -0.25
LRTM1-202ENST00000493075 ZNF543Q08ER8 600 aa13.5□□□□□ -0.25
LRTM1-202ENST00000493075 SNX17Q15036 470 aa13.5□□□□□ -0.25
LRTM1-202ENST00000493075 GPATCH4Q5T3I0 446 aaKnown RBP13.5□□□□□ -0.25
LRTM1-202ENST00000493075 ARMCX2Q7L311 632 aa13.5□□□□□ -0.25
LRTM1-202ENST00000493075 RASGRP2Q7LDG7 609 aa13.5□□□□□ -0.25
LRTM1-202ENST00000493075 CNNM2Q9H8M5 875 aa13.5□□□□□ -0.25
LRTM1-202ENST00000493075 ZSWIM5Q9P217 1185 aa13.5□□□□□ -0.25
LRTM1-202ENST00000493075 CCPG1Q9ULG6 757 aa13.5□□□□□ -0.25
LRTM1-202ENST00000493075 NEDD4P46934 1319 aa13.5□□□□□ -0.25
LRTM1-202ENST00000493075 SOWAHBA6NEL2 793 aa13.49□□□□□ -0.25
LRTM1-202ENST00000493075 ADAMTS4O75173 837 aa13.49□□□□□ -0.25
LRTM1-202ENST00000493075 PGK1P00558 417 aa13.49□□□□□ -0.25
LRTM1-202ENST00000493075 CHMLP26374 656 aa13.49□□□□□ -0.25
LRTM1-202ENST00000493075 MAGEA10P43363 369 aaPredicted RBP13.49□□□□□ -0.25
LRTM1-202ENST00000493075 RTP1P59025 263 aa13.49□□□□□ -0.25
LRTM1-202ENST00000493075 SNAP25P60880 206 aa13.49□□□□□ -0.25
LRTM1-202ENST00000493075 CNTN2Q02246 1040 aa13.49□□□□□ -0.25
LRTM1-202ENST00000493075 CCDC144CPQ8IYA2 1237 aa13.49□□□□□ -0.25
LRTM1-202ENST00000493075 KLHDC9Q8NEP7 349 aa13.49□□□□□ -0.25
LRTM1-202ENST00000493075 ZSCAN10Q96SZ4 725 aaPredicted RBP13.49□□□□□ -0.25
LRTM1-202ENST00000493075 KATNBL1Q9H079 304 aa13.49□□□□□ -0.25
LRTM1-202ENST00000493075 GPCPD1Q9NPB8 672 aa13.49□□□□□ -0.25
LRTM1-202ENST00000493075 CYP39A1Q9NYL5 469 aa13.49□□□□□ -0.25
LRTM1-202ENST00000493075 ZHX1Q9UKY1 873 aaPredicted RBP13.49□□□□□ -0.25
LRTM1-202ENST00000493075 FRMPD2Q68DX3 1309 aaPredicted RBP13.48□□□□□ -0.25
LRTM1-202ENST00000493075 LOC102724159A0A0B4J2E5 919 aa13.48□□□□□ -0.25
LRTM1-202ENST00000493075 B4E1Z4 1266 aa13.48□□□□□ -0.25
LRTM1-202ENST00000493075 MYCNP04198 464 aaPredicted RBP13.48□□□□□ -0.25
LRTM1-202ENST00000493075 NKX3-2P78367 333 aa13.48□□□□□ -0.25
LRTM1-202ENST00000493075 PWP2Q15269 919 aaKnown RBP13.48□□□□□ -0.25
LRTM1-202ENST00000493075 MUM1L1Q5H9M0 696 aa13.48□□□□□ -0.25
LRTM1-202ENST00000493075 PNMA1Q8ND90 353 aa13.48□□□□□ -0.25
LRTM1-202ENST00000493075 ZKSCAN3Q9BRR0 538 aa13.48□□□□□ -0.25
LRTM1-202ENST00000493075 MAF1Q9H063 256 aa13.48□□□□□ -0.25
LRTM1-202ENST00000493075 IL25Q9H293 177 aa13.48□□□□□ -0.25
LRTM1-202ENST00000493075 KAT14Q9H8E8 782 aa13.48□□□□□ -0.25
LRTM1-202ENST00000493075 WDR19Q8NEZ3 1342 aa13.47□□□□□ -0.25
LRTM1-202ENST00000493075 COL11A1P12107 1806 aaPredicted RBP13.47□□□□□ -0.25
LRTM1-202ENST00000493075 MOXD2PA6NHM9 499 aa13.47□□□□□ -0.25
LRTM1-202ENST00000493075 CST5P28325 142 aaPredicted RBP13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms