RNA–Protein interactions for RNA: ENST00000492909.1

PDZRN3-210, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 1 (best)

Gene PDZRN3, Length 1,776 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-210ENST00000492909 PTPRFP10586 1907 aa16.17■□□□□ 0.18
PDZRN3-210ENST00000492909 QRICH1Q2TAL8 776 aa16.17■□□□□ 0.18
PDZRN3-210ENST00000492909 OXER1Q8TDS5 423 aa16.17■□□□□ 0.18
PDZRN3-210ENST00000492909 ZMYND12Q9H0C1 365 aa16.17■□□□□ 0.18
PDZRN3-210ENST00000492909 GDPD2Q9HCC8 539 aa16.17■□□□□ 0.18
PDZRN3-210ENST00000492909 EMILIN3Q9NT22 766 aa16.17■□□□□ 0.18
PDZRN3-210ENST00000492909 TFIP11Q9UBB9 837 aaKnown RBP16.17■□□□□ 0.18
PDZRN3-210ENST00000492909 PRR12Q9ULL5 1215 aa16.17■□□□□ 0.18
PDZRN3-210ENST00000492909 ABT1Q9ULW3 272 aaKnown RBP16.17■□□□□ 0.18
PDZRN3-210ENST00000492909 AFG3L2Q9Y4W6 797 aa16.17■□□□□ 0.18
PDZRN3-210ENST00000492909 PRPF40AO75400 957 aaKnown RBP16.16■□□□□ 0.18
PDZRN3-210ENST00000492909 VCAM1P19320 739 aa16.16■□□□□ 0.18
PDZRN3-210ENST00000492909 KLHL40Q2TBA0 621 aa16.16■□□□□ 0.18
PDZRN3-210ENST00000492909 BLIDQ8IZY5 108 aa16.16■□□□□ 0.18
PDZRN3-210ENST00000492909 TMEM87AQ8NBN3 555 aa16.16■□□□□ 0.18
PDZRN3-210ENST00000492909 PCDHA4Q9UN74 947 aa16.16■□□□□ 0.18
PDZRN3-210ENST00000492909 ESYT2A0FGR8 921 aa16.15■□□□□ 0.18
PDZRN3-210ENST00000492909 PPP1R11O60927 126 aaPredicted RBP16.15■□□□□ 0.18
PDZRN3-210ENST00000492909 GNA11P29992 359 aa16.15■□□□□ 0.18
PDZRN3-210ENST00000492909 HMGCS2P54868 508 aa16.15■□□□□ 0.18
PDZRN3-210ENST00000492909 PPP1R18Q6NYC8 613 aa16.15■□□□□ 0.18
PDZRN3-210ENST00000492909 C2orf69Q8N8R5 385 aa16.15■□□□□ 0.18
PDZRN3-210ENST00000492909 DAGLBQ8NCG7 672 aa16.15■□□□□ 0.18
PDZRN3-210ENST00000492909 COA7Q96BR5 231 aa16.15■□□□□ 0.18
PDZRN3-210ENST00000492909 C12orf42Q96LP6 360 aa16.15■□□□□ 0.18
PDZRN3-210ENST00000492909 C6orf50Q9HD87 102 aa16.15■□□□□ 0.18
PDZRN3-210ENST00000492909 LMBRD1Q9NUN5 540 aa16.15■□□□□ 0.18
PDZRN3-210ENST00000492909 PARP14Q460N5 1801 aa16.15■□□□□ 0.18
PDZRN3-210ENST00000492909 SMCO2A6NFE2 343 aa16.15■□□□□ 0.18
PDZRN3-210ENST00000492909 DGKZQ13574 1117 aa16.15■□□□□ 0.18
PDZRN3-210ENST00000492909 ERO1BQ86YB8 467 aa16.15■□□□□ 0.18
PDZRN3-210ENST00000492909 KIFC2Q96AC6 838 aa16.15■□□□□ 0.18
PDZRN3-210ENST00000492909 SPATA32Q96LK8 384 aa16.15■□□□□ 0.18
PDZRN3-210ENST00000492909 USP28Q96RU2 1077 aa16.15■□□□□ 0.18
PDZRN3-210ENST00000492909 AMNQ9BXJ7 453 aa16.15■□□□□ 0.18
PDZRN3-210ENST00000492909 TANGO6Q9C0B7 1094 aa16.15■□□□□ 0.18
PDZRN3-210ENST00000492909 ELP3Q9H9T3 547 aa16.15■□□□□ 0.18
PDZRN3-210ENST00000492909 CREBZFQ9NS37 354 aa16.15■□□□□ 0.18
PDZRN3-210ENST00000492909 CEBPZQ03701 1054 aaKnown RBP16.14■□□□□ 0.17
PDZRN3-210ENST00000492909 PPATQ06203 517 aa16.14■□□□□ 0.17
PDZRN3-210ENST00000492909 RILPL1Q5EBL4 403 aa16.14■□□□□ 0.17
PDZRN3-210ENST00000492909 SAPCD2Q86UD0 394 aa16.14■□□□□ 0.17
PDZRN3-210ENST00000492909 GAS2L3Q86XJ1 694 aa16.14■□□□□ 0.17
PDZRN3-210ENST00000492909 PRPF38AQ8NAV1 312 aaKnown RBP16.14■□□□□ 0.17
PDZRN3-210ENST00000492909 TNFRSF25Q93038 417 aa16.14■□□□□ 0.17
PDZRN3-210ENST00000492909 CLMNQ96JQ2 1002 aa16.14■□□□□ 0.17
PDZRN3-210ENST00000492909 RPAP3Q9H6T3 665 aaPredicted RBP16.14■□□□□ 0.17
PDZRN3-210ENST00000492909 FBXO28Q9NVF7 368 aa16.14■□□□□ 0.17
PDZRN3-210ENST00000492909 TMOD4Q9NZQ9 345 aa16.14■□□□□ 0.17
PDZRN3-210ENST00000492909 PCDHA1Q9Y5I3 950 aa16.14■□□□□ 0.17
PDZRN3-210ENST00000492909 SPDYE5A6NIY4 337 aa16.13■□□□□ 0.17
PDZRN3-210ENST00000492909 UNCXA6NJT0 531 aa16.13■□□□□ 0.17
PDZRN3-210ENST00000492909 HUNKP57058 714 aa16.13■□□□□ 0.17
PDZRN3-210ENST00000492909 SNAP25P60880 206 aa16.13■□□□□ 0.17
PDZRN3-210ENST00000492909 TRAF1Q13077 416 aa16.13■□□□□ 0.17
PDZRN3-210ENST00000492909 SH3D19Q5HYK7 790 aa16.13■□□□□ 0.17
PDZRN3-210ENST00000492909 LDLRAD1Q5T700 205 aa16.13■□□□□ 0.17
PDZRN3-210ENST00000492909 FBXO11Q86XK2 927 aa16.13■□□□□ 0.17
PDZRN3-210ENST00000492909 BICD2Q8TD16 824 aa16.13■□□□□ 0.17
PDZRN3-210ENST00000492909 LEO1Q8WVC0 666 aaPredicted RBP16.13■□□□□ 0.17
PDZRN3-210ENST00000492909 SLF1Q9BQI6 1058 aa16.13■□□□□ 0.17
PDZRN3-210ENST00000492909 FTOQ9C0B1 505 aaKnown RBP eCLIP16.13■□□□□ 0.17
PDZRN3-210ENST00000492909 POLR3EQ9NVU0 708 aa16.13■□□□□ 0.17
PDZRN3-210ENST00000492909 RTEL1Q9NZ71 1219 aa16.13■□□□□ 0.17
PDZRN3-210ENST00000492909 TLL2Q9Y6L7 1015 aa16.13■□□□□ 0.17
PDZRN3-210ENST00000492909 ELP1O95163 1332 aa16.13■□□□□ 0.17
PDZRN3-210ENST00000492909 FLOT1O75955 427 aa16.13■□□□□ 0.17
PDZRN3-210ENST00000492909 ADCY7P51828 1080 aa16.13■□□□□ 0.17
PDZRN3-210ENST00000492909 FKBP1BP68106 108 aa16.13■□□□□ 0.17
PDZRN3-210ENST00000492909 SAMD1Q6SPF0 538 aaPredicted RBP16.13■□□□□ 0.17
PDZRN3-210ENST00000492909 CNKSR2Q8WXI2 1034 aa16.13■□□□□ 0.17
PDZRN3-210ENST00000492909 OTUD5Q96G74 571 aa16.13■□□□□ 0.17
PDZRN3-210ENST00000492909 RANBP17Q9H2T7 1088 aaKnown RBP16.13■□□□□ 0.17
PDZRN3-210ENST00000492909 RRAGDQ9NQL2 400 aaPredicted RBP16.13■□□□□ 0.17
PDZRN3-210ENST00000492909 DDX49Q9Y6V7 483 aaKnown RBP16.13■□□□□ 0.17
PDZRN3-210ENST00000492909 M0R2N6 131 aa16.12■□□□□ 0.17
PDZRN3-210ENST00000492909 ADAMTS3O15072 1205 aa16.12■□□□□ 0.17
PDZRN3-210ENST00000492909 ANO1Q5XXA6 986 aa16.12■□□□□ 0.17
PDZRN3-210ENST00000492909 REXO1Q8N1G1 1221 aaKnown RBP16.12■□□□□ 0.17
PDZRN3-210ENST00000492909 NOL7Q9UMY1 257 aaKnown RBP16.12■□□□□ 0.17
PDZRN3-210ENST00000492909 SMCHD1A6NHR9 2005 aa16.11■□□□□ 0.17
PDZRN3-210ENST00000492909 LOC285556D6RIA3 1793 aa16.11■□□□□ 0.17
PDZRN3-210ENST00000492909 CEP350Q5VT06 3117 aa16.11■□□□□ 0.17
PDZRN3-210ENST00000492909 CCDC194A0A1B0GVG4 234 aa16.11■□□□□ 0.17
PDZRN3-210ENST00000492909 IRF6O14896 467 aa16.11■□□□□ 0.17
PDZRN3-210ENST00000492909 YEATS4O95619 227 aa16.11■□□□□ 0.17
PDZRN3-210ENST00000492909 NASPP49321 788 aaPredicted RBP16.11■□□□□ 0.17
PDZRN3-210ENST00000492909 GRM1Q13255 1194 aa16.11■□□□□ 0.17
PDZRN3-210ENST00000492909 USH1GQ495M9 461 aa16.11■□□□□ 0.17
PDZRN3-210ENST00000492909 EARS2Q5JPH6 523 aaKnown RBP16.11■□□□□ 0.17
PDZRN3-210ENST00000492909 PIK3AP1Q6ZUJ8 805 aa16.11■□□□□ 0.17
PDZRN3-210ENST00000492909 RASGRP4Q8TDF6 673 aa16.11■□□□□ 0.17
PDZRN3-210ENST00000492909 CUL5Q93034 780 aa16.11■□□□□ 0.17
PDZRN3-210ENST00000492909 GLT8D2Q9H1C3 349 aa16.11■□□□□ 0.17
PDZRN3-210ENST00000492909 RIC8AQ9NPQ8 531 aa16.11■□□□□ 0.17
PDZRN3-210ENST00000492909 RCOR1Q9UKL0 485 aa16.11■□□□□ 0.17
PDZRN3-210ENST00000492909 PPP1R9AQ9ULJ8 1098 aa16.11■□□□□ 0.17
PDZRN3-210ENST00000492909 PCDHA6Q9UN73 950 aa16.11■□□□□ 0.17
PDZRN3-210ENST00000492909 PCDHA8Q9Y5H6 950 aa16.11■□□□□ 0.17
PDZRN3-210ENST00000492909 CLIC4Q9Y696 253 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms