RNA–Protein interactions for RNA: ENST00000492851.1

COL6A1-205, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 3

Gene COL6A1, Length 435 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-205ENST00000492851 RNF41Q9H4P4 317 aaPredicted RBP14.71□□□□□ -0.05
COL6A1-205ENST00000492851 TOMM22Q9NS69 142 aa14.71□□□□□ -0.05
COL6A1-205ENST00000492851 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.71□□□□□ -0.05
COL6A1-205ENST00000492851 ZHX1Q9UKY1 873 aaPredicted RBP14.71□□□□□ -0.05
COL6A1-205ENST00000492851 PARP14Q460N5 1801 aa14.71□□□□□ -0.06
COL6A1-205ENST00000492851 ALPK3Q96L96 1907 aa14.7□□□□□ -0.06
COL6A1-205ENST00000492851 HIP1O00291 1037 aa14.7□□□□□ -0.06
COL6A1-205ENST00000492851 PGK1P00558 417 aa14.7□□□□□ -0.06
COL6A1-205ENST00000492851 TOP1P11387 765 aaKnown RBP14.7□□□□□ -0.06
COL6A1-205ENST00000492851 TAL1P17542 331 aaPredicted RBP14.7□□□□□ -0.06
COL6A1-205ENST00000492851 TRIM60Q495X7 471 aa14.7□□□□□ -0.06
COL6A1-205ENST00000492851 B4GALNT3Q6L9W6 998 aa14.7□□□□□ -0.06
COL6A1-205ENST00000492851 MFSD6Q6ZSS7 791 aa14.7□□□□□ -0.06
COL6A1-205ENST00000492851 FAM227BQ96M60 508 aa14.7□□□□□ -0.06
COL6A1-205ENST00000492851 YTHDC1Q96MU7 727 aaKnown RBP14.7□□□□□ -0.06
COL6A1-205ENST00000492851 TOX2Q96NM4 488 aa14.7□□□□□ -0.06
COL6A1-205ENST00000492851 TRERF1Q96PN7 1200 aa14.7□□□□□ -0.06
COL6A1-205ENST00000492851 PRDM5Q9NQX1 630 aaPredicted RBP14.7□□□□□ -0.06
COL6A1-205ENST00000492851 CCDC171Q6TFL3 1326 aa14.69□□□□□ -0.06
COL6A1-205ENST00000492851 A0A1W2PQ45 241 aaPredicted RBP14.69□□□□□ -0.06
COL6A1-205ENST00000492851 A0A1W2PQY0 241 aa14.69□□□□□ -0.06
COL6A1-205ENST00000492851 ADAMTS4O75173 837 aa14.69□□□□□ -0.06
COL6A1-205ENST00000492851 ACLYP53396 1101 aa14.69□□□□□ -0.06
COL6A1-205ENST00000492851 NUCB1Q02818 461 aa14.69□□□□□ -0.06
COL6A1-205ENST00000492851 TLE2Q04725 743 aa14.69□□□□□ -0.06
COL6A1-205ENST00000492851 RRP12Q5JTH9 1297 aaKnown RBP14.69□□□□□ -0.06
COL6A1-205ENST00000492851 KCTD1Q719H9 257 aa14.69□□□□□ -0.06
COL6A1-205ENST00000492851 FAM133AQ8N9E0 248 aa14.69□□□□□ -0.06
COL6A1-205ENST00000492851 KLHDC9Q8NEP7 349 aa14.69□□□□□ -0.06
COL6A1-205ENST00000492851 GLT1D1Q96MS3 346 aa14.69□□□□□ -0.06
COL6A1-205ENST00000492851 INCENPQ9NQS7 918 aa14.69□□□□□ -0.06
COL6A1-205ENST00000492851 STARD7Q9NQZ5 370 aa14.69□□□□□ -0.06
COL6A1-205ENST00000492851 HOMER2Q9NSB8 354 aa14.69□□□□□ -0.06
COL6A1-205ENST00000492851 RNF146Q9NTX7 359 aa14.69□□□□□ -0.06
COL6A1-205ENST00000492851 PRR12Q9ULL5 1215 aa14.69□□□□□ -0.06
COL6A1-205ENST00000492851 ZNF536O15090 1300 aa14.68□□□□□ -0.06
COL6A1-205ENST00000492851 ELP1O95163 1332 aa14.68□□□□□ -0.06
COL6A1-205ENST00000492851 MROH7Q68CQ1 1323 aa14.68□□□□□ -0.06
COL6A1-205ENST00000492851 LOC102724159A0A0B4J2E5 919 aa14.68□□□□□ -0.06
COL6A1-205ENST00000492851 A0A0D9SFI3 127 aa14.68□□□□□ -0.06
COL6A1-205ENST00000492851 DCDC2CA8MYV0 355 aa14.68□□□□□ -0.06
COL6A1-205ENST00000492851 ZNF213O14771 459 aa14.68□□□□□ -0.06
COL6A1-205ENST00000492851 ICAM1P05362 532 aa14.68□□□□□ -0.06
COL6A1-205ENST00000492851 CLTBP09497 229 aa14.68□□□□□ -0.06
COL6A1-205ENST00000492851 ALAS1P13196 640 aa14.68□□□□□ -0.06
COL6A1-205ENST00000492851 SDSP20132 328 aa14.68□□□□□ -0.06
COL6A1-205ENST00000492851 CST5P28325 142 aaPredicted RBP14.68□□□□□ -0.06
COL6A1-205ENST00000492851 NMIQ13287 307 aaPredicted RBP14.68□□□□□ -0.06
COL6A1-205ENST00000492851 PWP2Q15269 919 aaKnown RBP14.68□□□□□ -0.06
COL6A1-205ENST00000492851 CCDC96Q2M329 555 aa14.68□□□□□ -0.06
COL6A1-205ENST00000492851 CCDC144BQ3MJ40 725 aa14.68□□□□□ -0.06
COL6A1-205ENST00000492851 CCDC178Q5BJE1 867 aa14.68□□□□□ -0.06
COL6A1-205ENST00000492851 AKNAD1Q5T1N1 836 aa14.68□□□□□ -0.06
COL6A1-205ENST00000492851 FAM109BQ6ICB4 259 aaPredicted RBP14.68□□□□□ -0.06
COL6A1-205ENST00000492851 BTNL9Q6UXG8 535 aa14.68□□□□□ -0.06
COL6A1-205ENST00000492851 ARMCX2Q7L311 632 aa14.68□□□□□ -0.06
COL6A1-205ENST00000492851 ANKRD33Q7Z3H0 272 aa14.68□□□□□ -0.06
COL6A1-205ENST00000492851 CCDC144CPQ8IYA2 1237 aa14.68□□□□□ -0.06
COL6A1-205ENST00000492851 DEFB123Q8N688 67 aa14.68□□□□□ -0.06
COL6A1-205ENST00000492851 ESR2Q92731 530 aa14.68□□□□□ -0.06
COL6A1-205ENST00000492851 AGBL1Q96MI9 1066 aa14.68□□□□□ -0.06
COL6A1-205ENST00000492851 A1CFQ9NQ94 594 aaKnown RBP14.68□□□□□ -0.06
COL6A1-205ENST00000492851 COL11A1P12107 1806 aaPredicted RBP14.68□□□□□ -0.06
COL6A1-205ENST00000492851 FRMPD3Q5JV73 1810 aa14.68□□□□□ -0.06
COL6A1-205ENST00000492851 SYNRGQ9UMZ2 1314 aa14.67□□□□□ -0.06
COL6A1-205ENST00000492851 NMT2O60551 498 aa14.67□□□□□ -0.06
COL6A1-205ENST00000492851 GJA9P57773 515 aa14.67□□□□□ -0.06
COL6A1-205ENST00000492851 KCNA10Q16322 511 aa14.67□□□□□ -0.06
COL6A1-205ENST00000492851 TMEM47Q9BQJ4 181 aa14.67□□□□□ -0.06
COL6A1-205ENST00000492851 SEZ6LQ9BYH1 1024 aa14.67□□□□□ -0.06
COL6A1-205ENST00000492851 PDLIM7Q9NR12 457 aa14.67□□□□□ -0.06
COL6A1-205ENST00000492851 ADD3Q9UEY8 706 aaKnown RBP14.67□□□□□ -0.06
COL6A1-205ENST00000492851 CCPG1Q9ULG6 757 aa14.67□□□□□ -0.06
COL6A1-205ENST00000492851 KIAA0355O15063 1070 aa14.66□□□□□ -0.06
COL6A1-205ENST00000492851 C6orf222P0C671 652 aaPredicted RBP14.66□□□□□ -0.06
COL6A1-205ENST00000492851 RAG1P15918 1043 aa14.66□□□□□ -0.06
COL6A1-205ENST00000492851 NKX3-2P78367 333 aa14.66□□□□□ -0.06
COL6A1-205ENST00000492851 TNFAIP2Q03169 654 aa14.66□□□□□ -0.06
COL6A1-205ENST00000492851 GNASQ5JWF2 1037 aa14.66□□□□□ -0.06
COL6A1-205ENST00000492851 IQSEC1Q6DN90 963 aa14.66□□□□□ -0.06
COL6A1-205ENST00000492851 CCSAPQ6IQ19 270 aaPredicted RBP14.66□□□□□ -0.06
COL6A1-205ENST00000492851 CCDC174Q6PII3 467 aa14.66□□□□□ -0.06
COL6A1-205ENST00000492851 DGKHQ86XP1 1220 aa14.66□□□□□ -0.06
COL6A1-205ENST00000492851 PLEKHM2Q8IWE5 1019 aa14.66□□□□□ -0.06
COL6A1-205ENST00000492851 BADQ92934 168 aa14.66□□□□□ -0.06
COL6A1-205ENST00000492851 VTI1AQ96AJ9 217 aa14.66□□□□□ -0.06
COL6A1-205ENST00000492851 MPHOSPH6Q99547 160 aaKnown RBP14.66□□□□□ -0.06
COL6A1-205ENST00000492851 UPF3AQ9H1J1 476 aaKnown RBP14.66□□□□□ -0.06
COL6A1-205ENST00000492851 RANBP17Q9H2T7 1088 aaKnown RBP14.66□□□□□ -0.06
COL6A1-205ENST00000492851 DIAPH3Q9NSV4 1193 aa14.66□□□□□ -0.06
COL6A1-205ENST00000492851 TMEM39AQ9NV64 488 aa14.66□□□□□ -0.06
COL6A1-205ENST00000492851 CTNNA3Q9UI47 895 aa14.66□□□□□ -0.06
COL6A1-205ENST00000492851 Q9Y3F1 56 aa14.66□□□□□ -0.06
COL6A1-205ENST00000492851 ZNFX1Q9P2E3 1918 aaKnown RBP14.66□□□□□ -0.06
COL6A1-205ENST00000492851 SZT2Q5T011 3432 aa14.65□□□□□ -0.06
COL6A1-205ENST00000492851 MYH4Q9Y623 1939 aa14.65□□□□□ -0.06
COL6A1-205ENST00000492851 B4DLN1 442 aa14.65□□□□□ -0.06
COL6A1-205ENST00000492851 ZEB2O60315 1214 aa14.65□□□□□ -0.06
COL6A1-205ENST00000492851 PQBP1O60828 265 aaKnown RBP14.65□□□□□ -0.06
COL6A1-205ENST00000492851 CABYRO75952 493 aa14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms