RNA–Protein interactions for RNA: ENST00000492626.5

SNX13-209, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 3,956 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-209ENST00000492626 MKRN2Q9H000 416 aaKnown RBP4.02□□□□□ -1.77
SNX13-209ENST00000492626 MBIPQ9NS73 344 aa4.02□□□□□ -1.77
SNX13-209ENST00000492626 PCDHB10Q9UN67 800 aa4.02□□□□□ -1.77
SNX13-209ENST00000492626 ALS2Q96Q42 1657 aa4.01□□□□□ -1.77
SNX13-209ENST00000492626 ANKRD34BA5PLL1 514 aa4.01□□□□□ -1.77
SNX13-209ENST00000492626 IRS4O14654 1257 aaPredicted RBP4.01□□□□□ -1.77
SNX13-209ENST00000492626 TP53P04637 393 aaPredicted RBP4.01□□□□□ -1.77
SNX13-209ENST00000492626 ID3Q02535 119 aa4.01□□□□□ -1.77
SNX13-209ENST00000492626 AARSD1Q9BTE6 412 aaKnown RBP4.01□□□□□ -1.77
SNX13-209ENST00000492626 CARD10Q9BWT7 1032 aa4.01□□□□□ -1.77
SNX13-209ENST00000492626 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP4.01□□□□□ -1.77
SNX13-209ENST00000492626 CCDC86Q9H6F5 360 aaKnown RBP4.01□□□□□ -1.77
SNX13-209ENST00000492626 CNNM2Q9H8M5 875 aa4.01□□□□□ -1.77
SNX13-209ENST00000492626 GGA1Q9UJY5 639 aa4.01□□□□□ -1.77
SNX13-209ENST00000492626 THRAP3Q9Y2W1 955 aaKnown RBP4.01□□□□□ -1.77
SNX13-209ENST00000492626 NPHP3Q7Z494 1330 aa4.01□□□□□ -1.77
SNX13-209ENST00000492626 KIF1BO60333 1816 aa4.01□□□□□ -1.77
SNX13-209ENST00000492626 TRBV23-1A0A0A0MS06 115 aa4.01□□□□□ -1.77
SNX13-209ENST00000492626 SLC22A31A6NKX4 558 aa4.01□□□□□ -1.77
SNX13-209ENST00000492626 CA12O43570 354 aa4.01□□□□□ -1.77
SNX13-209ENST00000492626 HNRNPMP52272 730 aaKnown RBP eCLIP4.01□□□□□ -1.77
SNX13-209ENST00000492626 RNF4P78317 190 aa4.01□□□□□ -1.77
SNX13-209ENST00000492626 PLEKHG6Q3KR16 790 aa4.01□□□□□ -1.77
SNX13-209ENST00000492626 TRAPPC3LQ5T215 181 aa4.01□□□□□ -1.77
SNX13-209ENST00000492626 GORABQ5T7V8 394 aa4.01□□□□□ -1.77
SNX13-209ENST00000492626 SLC6A19Q695T7 634 aa4.01□□□□□ -1.77
SNX13-209ENST00000492626 PDZD3Q86UT5 571 aa4.01□□□□□ -1.77
SNX13-209ENST00000492626 WNT10AQ9GZT5 417 aa4.01□□□□□ -1.77
SNX13-209ENST00000492626 CYP4F12Q9HCS2 524 aa4.01□□□□□ -1.77
SNX13-209ENST00000492626 CHPF2Q9P2E5 772 aa4.01□□□□□ -1.77
SNX13-209ENST00000492626 COL18A1P39060 1754 aa4.01□□□□□ -1.77
SNX13-209ENST00000492626 FAM153BP0C7A2 387 aa4.01□□□□□ -1.77
SNX13-209ENST00000492626 INPP5AQ14642 412 aa4.01□□□□□ -1.77
SNX13-209ENST00000492626 NUTM2GQ5VZR2 741 aa4.01□□□□□ -1.77
SNX13-209ENST00000492626 NINJ1Q92982 152 aa4.01□□□□□ -1.77
SNX13-209ENST00000492626 ASCC2Q9H1I8 757 aaPredicted RBP4.01□□□□□ -1.77
SNX13-209ENST00000492626 AAASQ9NRG9 546 aa4.01□□□□□ -1.77
SNX13-209ENST00000492626 NAGPAQ9UK23 515 aa4.01□□□□□ -1.77
SNX13-209ENST00000492626 TNFRSF10CO14798 259 aa4□□□□□ -1.77
SNX13-209ENST00000492626 PLIN1O60240 522 aa4□□□□□ -1.77
SNX13-209ENST00000492626 THBS1P07996 1170 aa4□□□□□ -1.77
SNX13-209ENST00000492626 SART3Q15020 963 aaKnown RBP4□□□□□ -1.77
SNX13-209ENST00000492626 R3HDM1Q15032 1099 aaKnown RBP4□□□□□ -1.77
SNX13-209ENST00000492626 DUOXA2Q1HG44 320 aa4□□□□□ -1.77
SNX13-209ENST00000492626 RASIP1Q5U651 963 aa4□□□□□ -1.77
SNX13-209ENST00000492626 CDCP2Q5VXM1 449 aa4□□□□□ -1.77
SNX13-209ENST00000492626 KRT26Q7Z3Y9 468 aa4□□□□□ -1.77
SNX13-209ENST00000492626 SCUBE1Q8IWY4 988 aa4□□□□□ -1.77
SNX13-209ENST00000492626 LRRN4CLQ8ND94 238 aa4□□□□□ -1.77
SNX13-209ENST00000492626 YIPF2Q9BWQ6 316 aa4□□□□□ -1.77
SNX13-209ENST00000492626 FBXL21Q9UKT6 434 aa4□□□□□ -1.77
SNX13-209ENST00000492626 ADAMTS13Q76LX8 1427 aa4□□□□□ -1.77
SNX13-209ENST00000492626 CASKIN1Q8WXD9 1431 aa4□□□□□ -1.77
SNX13-209ENST00000492626 NSD3Q9BZ95 1437 aa4□□□□□ -1.77
SNX13-209ENST00000492626 PLD2O14939 933 aa4□□□□□ -1.77
SNX13-209ENST00000492626 SART1O43290 800 aaKnown RBP4□□□□□ -1.77
SNX13-209ENST00000492626 PDGFRBP09619 1106 aa4□□□□□ -1.77
SNX13-209ENST00000492626 ITGA4P13612 1032 aa4□□□□□ -1.77
SNX13-209ENST00000492626 CD68P34810 354 aaPredicted RBP4□□□□□ -1.77
SNX13-209ENST00000492626 SUMO1P63165 101 aaKnown RBP4□□□□□ -1.77
SNX13-209ENST00000492626 TMEM201Q5SNT2 666 aa4□□□□□ -1.77
SNX13-209ENST00000492626 SLCO4C1Q6ZQN7 724 aa4□□□□□ -1.77
SNX13-209ENST00000492626 DDX46Q7L014 1031 aaKnown RBP4□□□□□ -1.77
SNX13-209ENST00000492626 SLC9A7Q96T83 725 aa4□□□□□ -1.77
SNX13-209ENST00000492626 ATP8A1Q9Y2Q0 1164 aa4□□□□□ -1.77
SNX13-209ENST00000492626 TRPM3Q9HCF6 1732 aaPredicted RBP4□□□□□ -1.77
SNX13-209ENST00000492626 RIMS2Q9UQ26 1411 aa4□□□□□ -1.77
SNX13-209ENST00000492626 PMS1P54277 932 aaKnown RBP4□□□□□ -1.77
SNX13-209ENST00000492626 MAP7Q14244 749 aa4□□□□□ -1.77
SNX13-209ENST00000492626 MPRIPQ6WCQ1 1025 aa4□□□□□ -1.77
SNX13-209ENST00000492626 KLHDC7BQ96G42 594 aa4□□□□□ -1.77
SNX13-209ENST00000492626 KIF2CQ99661 725 aa4□□□□□ -1.77
SNX13-209ENST00000492626 DHRS4Q9BTZ2 278 aa4□□□□□ -1.77
SNX13-209ENST00000492626 KANSL2Q9H9L4 492 aa4□□□□□ -1.77
SNX13-209ENST00000492626 PRR36Q9H6K5 1346 aa3.99□□□□□ -1.77
SNX13-209ENST00000492626 CHURC1-FNTBB4DL54 471 aa3.99□□□□□ -1.77
SNX13-209ENST00000492626 OS9Q13438 667 aaPredicted RBP3.99□□□□□ -1.77
SNX13-209ENST00000492626 KIF4BQ2VIQ3 1234 aa3.99□□□□□ -1.77
SNX13-209ENST00000492626 TKFCQ3LXA3 575 aa3.99□□□□□ -1.77
SNX13-209ENST00000492626 FNDC3BQ53EP0 1204 aaKnown RBP3.99□□□□□ -1.77
SNX13-209ENST00000492626 PPM1JQ5JR12 505 aa3.99□□□□□ -1.77
SNX13-209ENST00000492626 FDX2Q6P4F2 183 aa3.99□□□□□ -1.77
SNX13-209ENST00000492626 DYMQ7RTS9 669 aa3.99□□□□□ -1.77
SNX13-209ENST00000492626 PPM1KQ8N3J5 372 aa3.99□□□□□ -1.77
SNX13-209ENST00000492626 TMEM87BQ96K49 555 aa3.99□□□□□ -1.77
SNX13-209ENST00000492626 SLC6A18Q96N87 628 aa3.99□□□□□ -1.77
SNX13-209ENST00000492626 MYH16Q9H6N6 1097 aa3.99□□□□□ -1.77
SNX13-209ENST00000492626 MAGEC2Q9UBF1 373 aaPredicted RBP3.99□□□□□ -1.77
SNX13-209ENST00000492626 SFMBT1Q9UHJ3 866 aa3.99□□□□□ -1.77
SNX13-209ENST00000492626 PPLO60437 1756 aa3.99□□□□□ -1.77
SNX13-209ENST00000492626 M0R082 166 aa3.99□□□□□ -1.77
SNX13-209ENST00000492626 GAS2O43903 313 aaKnown RBP3.99□□□□□ -1.77
SNX13-209ENST00000492626 OPA1O60313 960 aa3.99□□□□□ -1.77
SNX13-209ENST00000492626 PDE8AO60658 829 aa3.99□□□□□ -1.77
SNX13-209ENST00000492626 NAT1P18440 290 aa3.99□□□□□ -1.77
SNX13-209ENST00000492626 KCNJ6P48051 423 aa3.99□□□□□ -1.77
SNX13-209ENST00000492626 NEK4P51957 841 aa3.99□□□□□ -1.77
SNX13-209ENST00000492626 ERVK-24P63145 666 aa3.99□□□□□ -1.77
SNX13-209ENST00000492626 FAM50AQ14320 339 aaKnown RBP3.99□□□□□ -1.77
SNX13-209ENST00000492626 NBPF12Q5TAG4 269 aaPredicted RBP3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms