RNA–Protein interactions for RNA: ENST00000492536.5

RUSC1-215, Transcript of RUN and SH3 domain containing 1, human

TSL 3

Gene RUSC1, Length 1,069 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RUSC1-215	ENST00000492536	ATP11B	Q9Y2G3	1177 aa		27.9	■■■□□ 2.06
RUSC1-215	ENST00000492536	TACC3	Q9Y6A5	838 aa		27.9	■■■□□ 2.06
RUSC1-215	ENST00000492536	SNAI1	O95863	264 aa	Predicted RBP	27.89	■■■□□ 2.06
RUSC1-215	ENST00000492536	MDM2	Q00987	491 aa	Predicted RBP	27.89	■■■□□ 2.06
RUSC1-215	ENST00000492536	PLEKHM2	Q8IWE5	1019 aa		27.89	■■■□□ 2.06
RUSC1-215	ENST00000492536	EXOC6	Q8TAG9	804 aa		27.89	■■■□□ 2.06
RUSC1-215	ENST00000492536	FAM184B	Q9ULE4	1060 aa		27.89	■■■□□ 2.06
RUSC1-215	ENST00000492536	SMCHD1	A6NHR9	2005 aa		27.89	■■■□□ 2.05
RUSC1-215	ENST00000492536	PGK1	P00558	417 aa		27.88	■■■□□ 2.05
RUSC1-215	ENST00000492536	IGHD	P01880	384 aa		27.88	■■■□□ 2.05
RUSC1-215	ENST00000492536	KCTD1	Q719H9	257 aa		27.88	■■■□□ 2.05
RUSC1-215	ENST00000492536	DCAF4	Q8WV16	495 aa		27.88	■■■□□ 2.05
RUSC1-215	ENST00000492536	LRCH3	Q96II8	777 aa		27.88	■■■□□ 2.05
RUSC1-215	ENST00000492536	ABHD16B	Q9H3Z7	469 aa		27.88	■■■□□ 2.05
RUSC1-215	ENST00000492536	HOMER2	Q9NSB8	354 aa		27.88	■■■□□ 2.05
RUSC1-215	ENST00000492536	TCP11L1	Q9NUJ3	509 aa		27.88	■■■□□ 2.05
RUSC1-215	ENST00000492536	ZNF536	O15090	1300 aa		27.88	■■■□□ 2.05
RUSC1-215	ENST00000492536	SDS	P20132	328 aa		27.87	■■■□□ 2.05
RUSC1-215	ENST00000492536	RRP12	Q5JTH9	1297 aa	Known RBP	27.87	■■■□□ 2.05
RUSC1-215	ENST00000492536	CDKN2AIP	Q9NXV6	580 aa	Predicted RBP	27.87	■■■□□ 2.05
RUSC1-215	ENST00000492536	ZHX1	Q9UKY1	873 aa	Predicted RBP	27.87	■■■□□ 2.05
RUSC1-215	ENST00000492536	ADAMTS4	O75173	837 aa		27.86	■■■□□ 2.05
RUSC1-215	ENST00000492536	TOP1	P11387	765 aa	Known RBP	27.86	■■■□□ 2.05
RUSC1-215	ENST00000492536	TRIM60	Q495X7	471 aa		27.86	■■■□□ 2.05
RUSC1-215	ENST00000492536	FERMT2	Q96AC1	680 aa		27.86	■■■□□ 2.05
RUSC1-215	ENST00000492536	TSEN34	Q9BSV6	310 aa	Known RBP	27.86	■■■□□ 2.05
RUSC1-215	ENST00000492536	RNF146	Q9NTX7	359 aa		27.86	■■■□□ 2.05
RUSC1-215	ENST00000492536	PRR12	Q9ULL5	1215 aa		27.86	■■■□□ 2.05
RUSC1-215	ENST00000492536	ACVR2B	Q13705	512 aa		27.85	■■■□□ 2.05
RUSC1-215	ENST00000492536	FGD4	Q96M96	766 aa		27.85	■■■□□ 2.05
RUSC1-215	ENST00000492536	AGBL1	Q96MI9	1066 aa		27.85	■■■□□ 2.05
RUSC1-215	ENST00000492536	RNF41	Q9H4P4	317 aa	Predicted RBP	27.85	■■■□□ 2.05
RUSC1-215	ENST00000492536	POTEB2	H3BUK9	544 aa		27.84	■■■□□ 2.05
RUSC1-215	ENST00000492536	HIP1	O00291	1037 aa		27.84	■■■□□ 2.05
RUSC1-215	ENST00000492536	DUSP11	O75319	330 aa	Known RBP	27.84	■■■□□ 2.05
RUSC1-215	ENST00000492536	NT5C2	P49902	561 aa		27.84	■■■□□ 2.05
RUSC1-215	ENST00000492536	CCDC96	Q2M329	555 aa		27.84	■■■□□ 2.05
RUSC1-215	ENST00000492536	AKNAD1	Q5T1N1	836 aa		27.84	■■■□□ 2.05
RUSC1-215	ENST00000492536	MFSD6	Q6ZSS7	791 aa		27.84	■■■□□ 2.05
RUSC1-215	ENST00000492536	ARMCX2	Q7L311	632 aa		27.84	■■■□□ 2.05
RUSC1-215	ENST00000492536	FAM133A	Q8N9E0	248 aa		27.84	■■■□□ 2.05
RUSC1-215	ENST00000492536	CHMP4C	Q96CF2	233 aa		27.84	■■■□□ 2.05
RUSC1-215	ENST00000492536	A1CF	Q9NQ94	594 aa	Known RBP	27.84	■■■□□ 2.05
RUSC1-215	ENST00000492536	SYNRG	Q9UMZ2	1314 aa		27.84	■■■□□ 2.05
RUSC1-215	ENST00000492536	MOXD2P	A6NHM9	499 aa		27.83	■■■□□ 2.05
RUSC1-215	ENST00000492536	HAND2	P61296	217 aa		27.83	■■■□□ 2.05
RUSC1-215	ENST00000492536	LENG1	Q96BZ8	264 aa	Predicted RBP	27.83	■■■□□ 2.05
RUSC1-215	ENST00000492536	TTC14	Q96N46	770 aa		27.83	■■■□□ 2.05
RUSC1-215	ENST00000492536	TRERF1	Q96PN7	1200 aa		27.83	■■■□□ 2.05
RUSC1-215	ENST00000492536	MTMR7	Q9Y216	660 aa		27.83	■■■□□ 2.05
RUSC1-215	ENST00000492536		A0A1W2PQ45	241 aa	Predicted RBP	27.82	■■■□□ 2.04
RUSC1-215	ENST00000492536		A0A1W2PQY0	241 aa		27.82	■■■□□ 2.04
RUSC1-215	ENST00000492536	ALAS1	P13196	640 aa		27.82	■■■□□ 2.04
RUSC1-215	ENST00000492536	CCDC174	Q6PII3	467 aa		27.82	■■■□□ 2.04
RUSC1-215	ENST00000492536	BTNL9	Q6UXG8	535 aa		27.82	■■■□□ 2.04
RUSC1-215	ENST00000492536	RASGRP2	Q7LDG7	609 aa		27.82	■■■□□ 2.04
RUSC1-215	ENST00000492536	KLHDC9	Q8NEP7	349 aa		27.82	■■■□□ 2.04
RUSC1-215	ENST00000492536	NUP133	Q8WUM0	1156 aa		27.82	■■■□□ 2.04
RUSC1-215	ENST00000492536	TMEM47	Q9BQJ4	181 aa		27.82	■■■□□ 2.04
RUSC1-215	ENST00000492536	PRDM5	Q9NQX1	630 aa	Predicted RBP	27.82	■■■□□ 2.04
RUSC1-215	ENST00000492536	DIAPH3	Q9NSV4	1193 aa		27.82	■■■□□ 2.04
RUSC1-215	ENST00000492536	ASB14	A6NK59	587 aa		27.81	■■■□□ 2.04
RUSC1-215	ENST00000492536	ICAM1	P05362	532 aa		27.81	■■■□□ 2.04
RUSC1-215	ENST00000492536	CCDC144CP	Q8IYA2	1237 aa		27.81	■■■□□ 2.04
RUSC1-215	ENST00000492536	RANBP17	Q9H2T7	1088 aa	Known RBP	27.81	■■■□□ 2.04
RUSC1-215	ENST00000492536	SPC25	Q9HBM1	224 aa		27.81	■■■□□ 2.04
RUSC1-215	ENST00000492536	PDLIM7	Q9NR12	457 aa		27.81	■■■□□ 2.04
RUSC1-215	ENST00000492536	CCPG1	Q9ULG6	757 aa		27.81	■■■□□ 2.04
RUSC1-215	ENST00000492536	CST5	P28325	142 aa	Predicted RBP	27.8	■■■□□ 2.04
RUSC1-215	ENST00000492536	ACLY	P53396	1101 aa		27.8	■■■□□ 2.04
RUSC1-215	ENST00000492536	CNTN2	Q02246	1040 aa		27.8	■■■□□ 2.04
RUSC1-215	ENST00000492536	TLE2	Q04725	743 aa		27.8	■■■□□ 2.04
RUSC1-215	ENST00000492536	CCDC144B	Q3MJ40	725 aa		27.8	■■■□□ 2.04
RUSC1-215	ENST00000492536	CWC27	Q6UX04	472 aa	Known RBP	27.8	■■■□□ 2.04
RUSC1-215	ENST00000492536	TBC1D10C	Q8IV04	446 aa		27.8	■■■□□ 2.04
RUSC1-215	ENST00000492536	ESR2	Q92731	530 aa		27.8	■■■□□ 2.04
RUSC1-215	ENST00000492536	LTBP2	Q14767	1821 aa		27.8	■■■□□ 2.04
RUSC1-215	ENST00000492536	ZNF213	O14771	459 aa		27.79	■■■□□ 2.04
RUSC1-215	ENST00000492536	SYDE2	Q5VT97	1194 aa		27.79	■■■□□ 2.04
RUSC1-215	ENST00000492536	PCSK9	Q8NBP7	692 aa	Known RBP	27.79	■■■□□ 2.04
RUSC1-215	ENST00000492536	PNMA2	Q9UL42	364 aa		27.79	■■■□□ 2.04
RUSC1-215	ENST00000492536	PDHB	P11177	359 aa		27.78	■■■□□ 2.04
RUSC1-215	ENST00000492536	SNAP25	P60880	206 aa		27.78	■■■□□ 2.04
RUSC1-215	ENST00000492536	CCSAP	Q6IQ19	270 aa	Predicted RBP	27.78	■■■□□ 2.04
RUSC1-215	ENST00000492536	KATNBL1	Q9H079	304 aa		27.78	■■■□□ 2.04
RUSC1-215	ENST00000492536	UPF3A	Q9H1J1	476 aa	Known RBP	27.78	■■■□□ 2.04
RUSC1-215	ENST00000492536	STARD7	Q9NQZ5	370 aa		27.78	■■■□□ 2.04
RUSC1-215	ENST00000492536	CYP39A1	Q9NYL5	469 aa		27.78	■■■□□ 2.04
RUSC1-215	ENST00000492536	CLTB	P09497	229 aa		27.77	■■■□□ 2.04
RUSC1-215	ENST00000492536	C6orf222	P0C671	652 aa	Predicted RBP	27.77	■■■□□ 2.04
RUSC1-215	ENST00000492536	GJA9	P57773	515 aa		27.77	■■■□□ 2.04
RUSC1-215	ENST00000492536	KCNA10	Q16322	511 aa		27.77	■■■□□ 2.04
RUSC1-215	ENST00000492536	TTBK2	Q6IQ55	1244 aa		27.77	■■■□□ 2.04
RUSC1-215	ENST00000492536	SOWAHB	A6NEL2	793 aa		27.76	■■■□□ 2.03
RUSC1-215	ENST00000492536	SLC16A2	P36021	539 aa		27.76	■■■□□ 2.03
RUSC1-215	ENST00000492536	MUM1L1	Q5H9M0	696 aa		27.76	■■■□□ 2.03
RUSC1-215	ENST00000492536	ANKRD33	Q7Z3H0	272 aa		27.76	■■■□□ 2.03
RUSC1-215	ENST00000492536	GLT1D1	Q96MS3	346 aa		27.76	■■■□□ 2.03
RUSC1-215	ENST00000492536	TOX2	Q96NM4	488 aa		27.76	■■■□□ 2.03
RUSC1-215	ENST00000492536	DSCC1	Q9BVC3	393 aa		27.76	■■■□□ 2.03

Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms