RNA–Protein interactions for RNA: ENST00000492417.5

TRA2B-215, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best)

Gene TRA2B, Length 4,141 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-215ENST00000492417 MRVI1Q9Y6F6 885 aa5.07□□□□□ -1.6
TRA2B-215ENST00000492417 CETPP11597 493 aa5.07□□□□□ -1.6
TRA2B-215ENST00000492417 MCM4P33991 863 aa5.07□□□□□ -1.6
TRA2B-215ENST00000492417 HIRAP54198 1017 aaPredicted RBP5.07□□□□□ -1.6
TRA2B-215ENST00000492417 ANTXR2P58335 489 aa5.07□□□□□ -1.6
TRA2B-215ENST00000492417 IGBP1P78318 339 aa5.07□□□□□ -1.6
TRA2B-215ENST00000492417 PKP1Q13835 747 aa5.07□□□□□ -1.6
TRA2B-215ENST00000492417 PPP2R5BQ15173 497 aa5.07□□□□□ -1.6
TRA2B-215ENST00000492417 PPP4R3AQ6IN85 833 aa5.07□□□□□ -1.6
TRA2B-215ENST00000492417 DTHD1Q6ZMT9 781 aa5.07□□□□□ -1.6
TRA2B-215ENST00000492417 RNF207Q6ZRF8 634 aa5.07□□□□□ -1.6
TRA2B-215ENST00000492417 NLRX1Q86UT6 975 aa5.07□□□□□ -1.6
TRA2B-215ENST00000492417 CNNM3Q8NE01 707 aa5.07□□□□□ -1.6
TRA2B-215ENST00000492417 RBM46Q8TBY0 533 aaKnown RBP5.07□□□□□ -1.6
TRA2B-215ENST00000492417 STAMQ92783 540 aa5.07□□□□□ -1.6
TRA2B-215ENST00000492417 SNX21Q969T3 373 aa5.07□□□□□ -1.6
TRA2B-215ENST00000492417 DHX58Q96C10 678 aa5.07□□□□□ -1.6
TRA2B-215ENST00000492417 FAM163AQ96GL9 167 aaPredicted RBP5.07□□□□□ -1.6
TRA2B-215ENST00000492417 AGBL1Q96MI9 1066 aa5.07□□□□□ -1.6
TRA2B-215ENST00000492417 IDI2Q9BXS1 227 aa5.07□□□□□ -1.6
TRA2B-215ENST00000492417 ZFYVE28Q9HCC9 887 aa5.07□□□□□ -1.6
TRA2B-215ENST00000492417 SPTLC2O15270 562 aa5.07□□□□□ -1.6
TRA2B-215ENST00000492417 PEX10O60683 326 aa5.07□□□□□ -1.6
TRA2B-215ENST00000492417 BACE1P56817 501 aa5.07□□□□□ -1.6
TRA2B-215ENST00000492417 CYP4A11Q02928 519 aa5.07□□□□□ -1.6
TRA2B-215ENST00000492417 BRDTQ58F21 947 aaPredicted RBP5.07□□□□□ -1.6
TRA2B-215ENST00000492417 TTC38Q5R3I4 469 aa5.07□□□□□ -1.6
TRA2B-215ENST00000492417 KRT79Q5XKE5 535 aa5.07□□□□□ -1.6
TRA2B-215ENST00000492417 WWC2Q6AWC2 1192 aa5.07□□□□□ -1.6
TRA2B-215ENST00000492417 PLA2G4DQ86XP0 818 aa5.07□□□□□ -1.6
TRA2B-215ENST00000492417 MCF2L2Q86YR7 1114 aa5.07□□□□□ -1.6
TRA2B-215ENST00000492417 NSUN7Q8NE18 718 aaKnown RBP5.07□□□□□ -1.6
TRA2B-215ENST00000492417 RAET1EQ8TD07 263 aa5.07□□□□□ -1.6
TRA2B-215ENST00000492417 ZSCAN16Q9H4T2 348 aaPredicted RBP5.07□□□□□ -1.6
TRA2B-215ENST00000492417 SPC25Q9HBM1 224 aa5.07□□□□□ -1.6
TRA2B-215ENST00000492417 AFDNP55196 1824 aaKnown RBP5.07□□□□□ -1.6
TRA2B-215ENST00000492417 GAKO14976 1311 aa5.07□□□□□ -1.6
TRA2B-215ENST00000492417 NRAPQ86VF7 1730 aa5.06□□□□□ -1.6
TRA2B-215ENST00000492417 BRWD3Q6RI45 1802 aa5.06□□□□□ -1.6
TRA2B-215ENST00000492417 C10orf71Q711Q0 1435 aa5.06□□□□□ -1.6
TRA2B-215ENST00000492417 A0A087WWV3 80 aa5.06□□□□□ -1.6
TRA2B-215ENST00000492417 C19orf81C9J6K1 198 aa5.06□□□□□ -1.6
TRA2B-215ENST00000492417 RDXP35241 583 aaKnown RBP5.06□□□□□ -1.6
TRA2B-215ENST00000492417 ARHGEF6Q15052 776 aa5.06□□□□□ -1.6
TRA2B-215ENST00000492417 TMED8Q6PL24 325 aaPredicted RBP5.06□□□□□ -1.6
TRA2B-215ENST00000492417 ERMNQ8TAM6 284 aa5.06□□□□□ -1.6
TRA2B-215ENST00000492417 ZNF384Q8TF68 577 aa5.06□□□□□ -1.6
TRA2B-215ENST00000492417 RMDN3Q96TC7 470 aa5.06□□□□□ -1.6
TRA2B-215ENST00000492417 FEM1BQ9UK73 627 aa5.06□□□□□ -1.6
TRA2B-215ENST00000492417 PRR12Q9ULL5 1215 aa5.06□□□□□ -1.6
TRA2B-215ENST00000492417 MARF1Q9Y4F3 1742 aaKnown RBP5.06□□□□□ -1.6
TRA2B-215ENST00000492417 C5P01031 1676 aa5.06□□□□□ -1.6
TRA2B-215ENST00000492417 PNMA6FA0A0J9YX94 578 aa5.06□□□□□ -1.6
TRA2B-215ENST00000492417 ZBTB5O15062 677 aa5.06□□□□□ -1.6
TRA2B-215ENST00000492417 GAS7O60861 476 aa5.06□□□□□ -1.6
TRA2B-215ENST00000492417 PDHBP11177 359 aa5.06□□□□□ -1.6
TRA2B-215ENST00000492417 CDC25AP30304 524 aa5.06□□□□□ -1.6
TRA2B-215ENST00000492417 GUCY1A2P33402 732 aa5.06□□□□□ -1.6
TRA2B-215ENST00000492417 CCT6AP40227 531 aaKnown RBP5.06□□□□□ -1.6
TRA2B-215ENST00000492417 GTF2A2P52657 109 aa5.06□□□□□ -1.6
TRA2B-215ENST00000492417 CBX1P83916 185 aa5.06□□□□□ -1.6
TRA2B-215ENST00000492417 TMTC3Q6ZXV5 915 aa5.06□□□□□ -1.6
TRA2B-215ENST00000492417 KRT25Q7Z3Z0 450 aa5.06□□□□□ -1.6
TRA2B-215ENST00000492417 TPH2Q8IWU9 490 aa5.06□□□□□ -1.6
TRA2B-215ENST00000492417 SRBD1Q8N5C6 995 aaKnown RBP5.06□□□□□ -1.6
TRA2B-215ENST00000492417 IGDCC4Q8TDY8 1250 aa5.06□□□□□ -1.6
TRA2B-215ENST00000492417 DCAF4Q8WV16 495 aa5.06□□□□□ -1.6
TRA2B-215ENST00000492417 TCHPQ9BT92 498 aa5.06□□□□□ -1.6
TRA2B-215ENST00000492417 ACBD3Q9H3P7 528 aa5.06□□□□□ -1.6
TRA2B-215ENST00000492417 TMEM260Q9NX78 707 aa5.06□□□□□ -1.6
TRA2B-215ENST00000492417 NYAP2Q9P242 653 aa5.06□□□□□ -1.6
TRA2B-215ENST00000492417 CGNQ9P2M7 1197 aaKnown RBP5.06□□□□□ -1.6
TRA2B-215ENST00000492417 A0A1B0GVL5 298 aa5.06□□□□□ -1.6
TRA2B-215ENST00000492417 TMEM88BA6NKF7 163 aa5.06□□□□□ -1.6
TRA2B-215ENST00000492417 PDHXO00330 501 aa5.06□□□□□ -1.6
TRA2B-215ENST00000492417 IFNAR1P17181 557 aa5.06□□□□□ -1.6
TRA2B-215ENST00000492417 VCAM1P19320 739 aa5.06□□□□□ -1.6
TRA2B-215ENST00000492417 STAT6P42226 847 aa5.06□□□□□ -1.6
TRA2B-215ENST00000492417 TECP42680 631 aa5.06□□□□□ -1.6
TRA2B-215ENST00000492417 FKBP1AP62942 108 aaKnown RBP5.06□□□□□ -1.6
TRA2B-215ENST00000492417 ZNF543Q08ER8 600 aa5.06□□□□□ -1.6
TRA2B-215ENST00000492417 BAATQ14032 418 aaPredicted RBP5.06□□□□□ -1.6
TRA2B-215ENST00000492417 GNPTABQ3T906 1256 aa5.06□□□□□ -1.6
TRA2B-215ENST00000492417 CCDC70Q6NSX1 233 aa5.06□□□□□ -1.6
TRA2B-215ENST00000492417 RGMBQ6NW40 437 aa5.06□□□□□ -1.6
TRA2B-215ENST00000492417 PDCL2Q8N4E4 241 aa5.06□□□□□ -1.6
TRA2B-215ENST00000492417 TBCKQ8TEA7 893 aa5.06□□□□□ -1.6
TRA2B-215ENST00000492417 PARK7Q99497 189 aaKnown RBP5.06□□□□□ -1.6
TRA2B-215ENST00000492417 LLPHQ9BRT6 129 aaKnown RBP5.06□□□□□ -1.6
TRA2B-215ENST00000492417 AZI2Q9H6S1 392 aa5.06□□□□□ -1.6
TRA2B-215ENST00000492417 WDR46O15213 610 aaKnown RBP5.05□□□□□ -1.6
TRA2B-215ENST00000492417 EPB41L2O43491 1005 aaKnown RBP5.05□□□□□ -1.6
TRA2B-215ENST00000492417 TOMM70O94826 608 aa5.05□□□□□ -1.6
TRA2B-215ENST00000492417 MBD3O95983 291 aa5.05□□□□□ -1.6
TRA2B-215ENST00000492417 PGK2P07205 417 aa5.05□□□□□ -1.6
TRA2B-215ENST00000492417 HARSP12081 509 aaKnown RBP5.05□□□□□ -1.6
TRA2B-215ENST00000492417 FCER1AP12319 257 aa5.05□□□□□ -1.6
TRA2B-215ENST00000492417 PTPRAP18433 802 aa5.05□□□□□ -1.6
TRA2B-215ENST00000492417 SREBF2Q12772 1141 aa5.05□□□□□ -1.6
TRA2B-215ENST00000492417 CALCRLQ16602 461 aa5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms