RNA–Protein interactions for RNA: ENST00000492407.1

HDAC3-212, Transcript of histone deacetylase 3, humanhuman

TSL 5

Gene HDAC3, Length 782 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-212ENST00000492407 M0R2C6 588 aa10.84□□□□□ -0.67
HDAC3-212ENST00000492407 RAG1P15918 1043 aa10.84□□□□□ -0.67
HDAC3-212ENST00000492407 NOVP48745 357 aa10.84□□□□□ -0.67
HDAC3-212ENST00000492407 STAT2P52630 851 aa10.84□□□□□ -0.67
HDAC3-212ENST00000492407 GJA9P57773 515 aa10.84□□□□□ -0.67
HDAC3-212ENST00000492407 TFAP4Q01664 338 aa10.84□□□□□ -0.67
HDAC3-212ENST00000492407 PPARAQ07869 468 aa10.84□□□□□ -0.67
HDAC3-212ENST00000492407 CCDC174Q6PII3 467 aa10.84□□□□□ -0.67
HDAC3-212ENST00000492407 SH3RF1Q7Z6J0 888 aa10.84□□□□□ -0.67
HDAC3-212ENST00000492407 CPXCR1Q8N123 301 aa10.84□□□□□ -0.67
HDAC3-212ENST00000492407 GLT1D1Q96MS3 346 aa10.84□□□□□ -0.67
HDAC3-212ENST00000492407 GUCD1Q96NT3 240 aa10.84□□□□□ -0.67
HDAC3-212ENST00000492407 SEMA6BQ9H3T3 888 aa10.84□□□□□ -0.67
HDAC3-212ENST00000492407 ACAD9Q9H845 621 aa10.84□□□□□ -0.67
HDAC3-212ENST00000492407 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.84□□□□□ -0.67
HDAC3-212ENST00000492407 ANAPC4Q9UJX5 808 aa10.84□□□□□ -0.67
HDAC3-212ENST00000492407 PARP14Q460N5 1801 aa10.84□□□□□ -0.67
HDAC3-212ENST00000492407 SYNRGQ9UMZ2 1314 aa10.84□□□□□ -0.67
HDAC3-212ENST00000492407 LOC102724159A0A0B4J2E5 919 aa10.83□□□□□ -0.68
HDAC3-212ENST00000492407 ASB14A6NK59 587 aa10.83□□□□□ -0.68
HDAC3-212ENST00000492407 PRDM1O75626 825 aa10.83□□□□□ -0.68
HDAC3-212ENST00000492407 CABYRO75952 493 aa10.83□□□□□ -0.68
HDAC3-212ENST00000492407 TIMP1P01033 207 aa10.83□□□□□ -0.68
HDAC3-212ENST00000492407 MX1P20591 662 aa10.83□□□□□ -0.68
HDAC3-212ENST00000492407 SLC1A4P43007 532 aa10.83□□□□□ -0.68
HDAC3-212ENST00000492407 NT5C2P49902 561 aa10.83□□□□□ -0.68
HDAC3-212ENST00000492407 CDK7P50613 346 aa10.83□□□□□ -0.68
HDAC3-212ENST00000492407 FPGSQ05932 587 aa10.83□□□□□ -0.68
HDAC3-212ENST00000492407 FAAP100Q0VG06 881 aa10.83□□□□□ -0.68
HDAC3-212ENST00000492407 PWP2Q15269 919 aaKnown RBP10.83□□□□□ -0.68
HDAC3-212ENST00000492407 ALX1Q15699 326 aa10.83□□□□□ -0.68
HDAC3-212ENST00000492407 KCNA10Q16322 511 aa10.83□□□□□ -0.68
HDAC3-212ENST00000492407 C9orf50Q5SZB4 431 aa10.83□□□□□ -0.68
HDAC3-212ENST00000492407 RCSD1Q6JBY9 416 aa10.83□□□□□ -0.68
HDAC3-212ENST00000492407 FSD1Q9BTV5 496 aa10.83□□□□□ -0.68
HDAC3-212ENST00000492407 RAVER2Q9HCJ3 691 aaKnown RBP10.83□□□□□ -0.68
HDAC3-212ENST00000492407 TMEM39AQ9NV64 488 aa10.83□□□□□ -0.68
HDAC3-212ENST00000492407 ZHX1Q9UKY1 873 aaPredicted RBP10.83□□□□□ -0.68
HDAC3-212ENST00000492407 PNMA2Q9UL42 364 aa10.83□□□□□ -0.68
HDAC3-212ENST00000492407 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.83□□□□□ -0.68
HDAC3-212ENST00000492407 Q9Y3F1 56 aa10.83□□□□□ -0.68
HDAC3-212ENST00000492407 MYH8P13535 1937 aa10.83□□□□□ -0.68
HDAC3-212ENST00000492407 BAZ2AQ9UIF9 1905 aaKnown RBP10.83□□□□□ -0.68
HDAC3-212ENST00000492407 MYH7P12883 1935 aa10.82□□□□□ -0.68
HDAC3-212ENST00000492407 A0A0C4DFX4 3053 aa10.82□□□□□ -0.68
HDAC3-212ENST00000492407 HSFX4A0A1B0GTS1 333 aaPredicted RBP10.82□□□□□ -0.68
HDAC3-212ENST00000492407 HSFX3A0A1B0GWH4 333 aaPredicted RBP10.82□□□□□ -0.68
HDAC3-212ENST00000492407 TMEM232C9JQI7 657 aa10.82□□□□□ -0.68
HDAC3-212ENST00000492407 PQBP1O60828 265 aaKnown RBP10.82□□□□□ -0.68
HDAC3-212ENST00000492407 FGRP09769 529 aa10.82□□□□□ -0.68
HDAC3-212ENST00000492407 AAMPQ13685 434 aa10.82□□□□□ -0.68
HDAC3-212ENST00000492407 CCDC144BQ3MJ40 725 aa10.82□□□□□ -0.68
HDAC3-212ENST00000492407 MFSD5Q6N075 450 aa10.82□□□□□ -0.68
HDAC3-212ENST00000492407 CCDC129Q6ZRS4 1044 aa10.82□□□□□ -0.68
HDAC3-212ENST00000492407 ARMCX2Q7L311 632 aa10.82□□□□□ -0.68
HDAC3-212ENST00000492407 FAM133AQ8N9E0 248 aa10.82□□□□□ -0.68
HDAC3-212ENST00000492407 EVI5LQ96CN4 794 aa10.82□□□□□ -0.68
HDAC3-212ENST00000492407 FGD4Q96M96 766 aa10.82□□□□□ -0.68
HDAC3-212ENST00000492407 KATNBL1Q9H079 304 aa10.82□□□□□ -0.68
HDAC3-212ENST00000492407 HELLSQ9NRZ9 838 aa10.82□□□□□ -0.68
HDAC3-212ENST00000492407 BCCIPQ9P287 314 aaKnown RBP eCLIP10.82□□□□□ -0.68
HDAC3-212ENST00000492407 ZBTB47Q9UFB7 747 aaPredicted RBP10.82□□□□□ -0.68
HDAC3-212ENST00000492407 TBX21Q9UL17 535 aa10.82□□□□□ -0.68
HDAC3-212ENST00000492407 PCDHB15Q9Y5E8 787 aa10.82□□□□□ -0.68
HDAC3-212ENST00000492407 A0A0U1RQG5 324 aaPredicted RBP10.81□□□□□ -0.68
HDAC3-212ENST00000492407 TSPY2A6NKD2 308 aa10.81□□□□□ -0.68
HDAC3-212ENST00000492407 ARVCFO00192 962 aa10.81□□□□□ -0.68
HDAC3-212ENST00000492407 TLR3O15455 904 aaKnown RBP10.81□□□□□ -0.68
HDAC3-212ENST00000492407 ORC4O43929 436 aa10.81□□□□□ -0.68
HDAC3-212ENST00000492407 ASGR1P07306 291 aa10.81□□□□□ -0.68
HDAC3-212ENST00000492407 C6orf222P0C671 652 aaPredicted RBP10.81□□□□□ -0.68
HDAC3-212ENST00000492407 ITGB8P26012 769 aa10.81□□□□□ -0.68
HDAC3-212ENST00000492407 PPIGQ13427 754 aaKnown RBP eCLIP10.81□□□□□ -0.681e-6■■□□□ 12.7
HDAC3-212ENST00000492407 GNASQ5JWF2 1037 aa10.81□□□□□ -0.68
HDAC3-212ENST00000492407 TSHZ3Q63HK5 1081 aa10.81□□□□□ -0.68
HDAC3-212ENST00000492407 IQSEC1Q6DN90 963 aa10.81□□□□□ -0.68
HDAC3-212ENST00000492407 PHF6Q8IWS0 365 aaKnown RBP eCLIP10.81□□□□□ -0.68
HDAC3-212ENST00000492407 CCDC144CPQ8IYA2 1237 aa10.81□□□□□ -0.68
HDAC3-212ENST00000492407 STK11IPQ8N1F8 1099 aa10.81□□□□□ -0.68
HDAC3-212ENST00000492407 LRRC47Q8N1G4 583 aaKnown RBP10.81□□□□□ -0.68
HDAC3-212ENST00000492407 RNPC3Q96LT9 517 aaKnown RBP10.81□□□□□ -0.68
HDAC3-212ENST00000492407 CDX2Q99626 313 aaPredicted RBP10.81□□□□□ -0.68
HDAC3-212ENST00000492407 MAF1Q9H063 256 aa10.81□□□□□ -0.68
HDAC3-212ENST00000492407 TCP11L1Q9NUJ3 509 aa10.81□□□□□ -0.68
HDAC3-212ENST00000492407 LTBP2Q14767 1821 aa10.81□□□□□ -0.68
HDAC3-212ENST00000492407 ZNF536O15090 1300 aa10.81□□□□□ -0.68
HDAC3-212ENST00000492407 SALL3Q9BXA9 1300 aa10.81□□□□□ -0.68
HDAC3-212ENST00000492407 ZEB2O60315 1214 aa10.8□□□□□ -0.68
HDAC3-212ENST00000492407 PCP11498 1178 aaKnown RBP10.8□□□□□ -0.68
HDAC3-212ENST00000492407 MCCP23508 829 aa10.8□□□□□ -0.68
HDAC3-212ENST00000492407 TNFAIP2Q03169 654 aa10.8□□□□□ -0.68
HDAC3-212ENST00000492407 HDAC1Q13547 482 aaPredicted RBP10.8□□□□□ -0.68
HDAC3-212ENST00000492407 BTNL9Q6UXG8 535 aa10.8□□□□□ -0.68
HDAC3-212ENST00000492407 TMEM199Q8N511 208 aa10.8□□□□□ -0.68
HDAC3-212ENST00000492407 SLC43A3Q8NBI5 491 aa10.8□□□□□ -0.68
HDAC3-212ENST00000492407 MORC4Q8TE76 937 aa10.8□□□□□ -0.68
HDAC3-212ENST00000492407 DCAF4Q8WV16 495 aa10.8□□□□□ -0.68
HDAC3-212ENST00000492407 TTC14Q96N46 770 aa10.8□□□□□ -0.68
HDAC3-212ENST00000492407 TRERF1Q96PN7 1200 aa10.8□□□□□ -0.68
HDAC3-212ENST00000492407 SEC62Q99442 399 aaKnown RBP10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms