RNA–Protein interactions for RNA: ENST00000492390.5

CDK11A-220, Transcript of cyclin dependent kinase 11A, humanhuman

TSL 3

Gene CDK11A, Length 976 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11A-220ENST00000492390 RFXAPO00287 272 aa18.81■□□□□ 0.6
CDK11A-220ENST00000492390 IRX6P78412 446 aaPredicted RBP18.81■□□□□ 0.6
CDK11A-220ENST00000492390 FAM83BQ5T0W9 1011 aa18.81■□□□□ 0.6
CDK11A-220ENST00000492390 SNRNP48Q6IEG0 339 aaKnown RBP18.81■□□□□ 0.6
CDK11A-220ENST00000492390 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.81■□□□□ 0.6
CDK11A-220ENST00000492390 SDR42E1Q8WUS8 393 aa18.81■□□□□ 0.6
CDK11A-220ENST00000492390 KHSRPQ92945 711 aaKnown RBP eCLIP18.81■□□□□ 0.6
CDK11A-220ENST00000492390 WNT8AQ9H1J5 351 aa18.81■□□□□ 0.6
CDK11A-220ENST00000492390 NOP58Q9Y2X3 529 aaKnown RBP18.81■□□□□ 0.6
CDK11A-220ENST00000492390 LRRC37A2A6NM11 1700 aa18.8■□□□□ 0.6
CDK11A-220ENST00000492390 FAM86C2PA6NEL3 165 aa18.8■□□□□ 0.6
CDK11A-220ENST00000492390 ATP2A1O14983 1001 aa18.8■□□□□ 0.6
CDK11A-220ENST00000492390 IPO8O15397 1037 aaKnown RBP18.8■□□□□ 0.6
CDK11A-220ENST00000492390 PFKMP08237 780 aa18.8■□□□□ 0.6
CDK11A-220ENST00000492390 ATP8B2P98198 1209 aa18.8■□□□□ 0.6
CDK11A-220ENST00000492390 ITGA7Q13683 1181 aa18.8■□□□□ 0.6
CDK11A-220ENST00000492390 TTF1Q15361 905 aaPredicted RBP18.8■□□□□ 0.6
CDK11A-220ENST00000492390 RIPK3Q9Y572 518 aa18.8■□□□□ 0.6
CDK11A-220ENST00000492390 SMIM22K7EJ46 135 aa18.79■□□□□ 0.6
CDK11A-220ENST00000492390 CA3P07451 260 aa18.79■□□□□ 0.6
CDK11A-220ENST00000492390 PDE6AP16499 860 aa18.79■□□□□ 0.6
CDK11A-220ENST00000492390 BEX3Q00994 111 aa18.79■□□□□ 0.6
CDK11A-220ENST00000492390 SLC9C2Q5TAH2 1124 aa18.79■□□□□ 0.6
CDK11A-220ENST00000492390 CXCL17Q6UXB2 119 aa18.79■□□□□ 0.6
CDK11A-220ENST00000492390 ARMCX2Q7L311 632 aa18.79■□□□□ 0.6
CDK11A-220ENST00000492390 VWCEQ96DN2 955 aa18.79■□□□□ 0.6
CDK11A-220ENST00000492390 SLF1Q9BQI6 1058 aa18.79■□□□□ 0.6
CDK11A-220ENST00000492390 TRIM27P14373 513 aa18.78■□□□□ 0.6
CDK11A-220ENST00000492390 CDK8P49336 464 aa18.78■□□□□ 0.6
CDK11A-220ENST00000492390 FGD4Q96M96 766 aa18.78■□□□□ 0.6
CDK11A-220ENST00000492390 KATNBL1Q9H079 304 aa18.78■□□□□ 0.6
CDK11A-220ENST00000492390 TRPV6Q9H1D0 765 aa18.78■□□□□ 0.6
CDK11A-220ENST00000492390 GRIN2DO15399 1336 aa18.77■□□□□ 0.6
CDK11A-220ENST00000492390 MYH8P13535 1937 aa18.77■□□□□ 0.6
CDK11A-220ENST00000492390 PRR33A8MZF0 331 aa18.77■□□□□ 0.6
CDK11A-220ENST00000492390 RAD21O60216 631 aa18.77■□□□□ 0.6
CDK11A-220ENST00000492390 B4GALT4O60513 344 aa18.77■□□□□ 0.6
CDK11A-220ENST00000492390 TNFAIP2Q03169 654 aa18.77■□□□□ 0.6
CDK11A-220ENST00000492390 CCDC144CPQ8IYA2 1237 aa18.77■□□□□ 0.6
CDK11A-220ENST00000492390 ANKRD35Q8N283 1001 aa18.77■□□□□ 0.6
CDK11A-220ENST00000492390 LCORLQ8N3X6 602 aa18.77■□□□□ 0.6
CDK11A-220ENST00000492390 PRPF38AQ8NAV1 312 aaKnown RBP18.77■□□□□ 0.6
CDK11A-220ENST00000492390 AGBL1Q96MI9 1066 aa18.77■□□□□ 0.6
CDK11A-220ENST00000492390 CERS4Q9HA82 394 aa18.77■□□□□ 0.6
CDK11A-220ENST00000492390 ATP8A2Q9NTI2 1148 aa18.77■□□□□ 0.6
CDK11A-220ENST00000492390 FBXO40Q9UH90 709 aa18.77■□□□□ 0.6
CDK11A-220ENST00000492390 ZNF532Q9HCE3 1301 aa18.76■□□□□ 0.59
CDK11A-220ENST00000492390 EPOPA6NHQ4 379 aa18.76■□□□□ 0.59
CDK11A-220ENST00000492390 ZEB2O60315 1214 aa18.76■□□□□ 0.59
CDK11A-220ENST00000492390 TTLL4Q14679 1199 aa18.76■□□□□ 0.59
CDK11A-220ENST00000492390 C12orf60Q5U649 245 aa18.76■□□□□ 0.59
CDK11A-220ENST00000492390 ERICH6BQ5W0A0 696 aa18.76■□□□□ 0.59
CDK11A-220ENST00000492390 KRT40Q6A162 431 aa18.76■□□□□ 0.59
CDK11A-220ENST00000492390 NOL8Q76FK4 1167 aaKnown RBP18.76■□□□□ 0.59
CDK11A-220ENST00000492390 PHOSPHO2Q8TCD6 241 aa18.76■□□□□ 0.59
CDK11A-220ENST00000492390 FRAT1Q92837 279 aaPredicted RBP18.76■□□□□ 0.59
CDK11A-220ENST00000492390 SCLYQ96I15 445 aa18.76■□□□□ 0.59
CDK11A-220ENST00000492390 ASTN1O14525 1302 aa18.75■□□□□ 0.59
CDK11A-220ENST00000492390 TCRBV5S4A2TA0A5A2 114 aa18.75■□□□□ 0.59
CDK11A-220ENST00000492390 ZBED4O75132 1171 aa18.75■□□□□ 0.59
CDK11A-220ENST00000492390 MRE11P49959 708 aa18.75■□□□□ 0.59
CDK11A-220ENST00000492390 TAP1Q03518 808 aa18.75■□□□□ 0.59
CDK11A-220ENST00000492390 FSCN1Q16658 493 aaKnown RBP18.75■□□□□ 0.59
CDK11A-220ENST00000492390 C16orf86Q6ZW13 317 aa18.75■□□□□ 0.59
CDK11A-220ENST00000492390 AMOTL1Q8IY63 956 aa18.75■□□□□ 0.59
CDK11A-220ENST00000492390 CPXCR1Q8N123 301 aa18.75■□□□□ 0.59
CDK11A-220ENST00000492390 CHST13Q8NET6 341 aa18.75■□□□□ 0.59
CDK11A-220ENST00000492390 ARNTL2Q8WYA1 636 aa18.75■□□□□ 0.59
CDK11A-220ENST00000492390 SLC9A7Q96T83 725 aa18.75■□□□□ 0.59
CDK11A-220ENST00000492390 AP5M1Q9H0R1 490 aa18.75■□□□□ 0.59
CDK11A-220ENST00000492390 CD320Q9NPF0 282 aa18.75■□□□□ 0.59
CDK11A-220ENST00000492390 GNEQ9Y223 722 aaKnown RBP18.75■□□□□ 0.59
CDK11A-220ENST00000492390 CTDP1Q9Y5B0 961 aaPredicted RBP18.75■□□□□ 0.59
CDK11A-220ENST00000492390 MCM3APO60318 1980 aa18.75■□□□□ 0.59
CDK11A-220ENST00000492390 C11orf97A0A1B0GVM6 126 aaPredicted RBP18.74■□□□□ 0.59
CDK11A-220ENST00000492390 ACTN1P12814 892 aa18.74■□□□□ 0.59
CDK11A-220ENST00000492390 SLC4A3P48751 1232 aa18.74■□□□□ 0.59
CDK11A-220ENST00000492390 C20orf194Q5TEA3 1177 aa18.74■□□□□ 0.59
CDK11A-220ENST00000492390 ZKSCAN2Q63HK3 967 aa18.74■□□□□ 0.59
CDK11A-220ENST00000492390 TLK2Q86UE8 772 aa18.74■□□□□ 0.59
CDK11A-220ENST00000492390 ARMT1Q9H993 441 aa18.74■□□□□ 0.59
CDK11A-220ENST00000492390 KIF28PB7ZC32 967 aa18.73■□□□□ 0.59
CDK11A-220ENST00000492390 SUPT20HL2P0C7V6 817 aa18.73■□□□□ 0.59
CDK11A-220ENST00000492390 GRB10Q13322 594 aa18.73■□□□□ 0.59
CDK11A-220ENST00000492390 SNX27Q96L92 541 aa18.73■□□□□ 0.59
CDK11A-220ENST00000492390 NUP88Q99567 741 aaPredicted RBP18.73■□□□□ 0.59
CDK11A-220ENST00000492390 TNNQ9UQP3 1299 aa18.73■□□□□ 0.59
CDK11A-220ENST00000492390 CYP2D7A0A087X1C5 515 aa18.72■□□□□ 0.59
CDK11A-220ENST00000492390 USP17L12C9JPN9 530 aa18.72■□□□□ 0.59
CDK11A-220ENST00000492390 USP17L21D6R901 530 aa18.72■□□□□ 0.59
CDK11A-220ENST00000492390 F5H6K3 240 aa18.72■□□□□ 0.59
CDK11A-220ENST00000492390 PRKAB2O43741 272 aa18.72■□□□□ 0.59
CDK11A-220ENST00000492390 OAZ1P54368 228 aa18.72■□□□□ 0.59
CDK11A-220ENST00000492390 KLRC3Q07444 240 aa18.72■□□□□ 0.59
CDK11A-220ENST00000492390 AACSQ86V21 672 aa18.72■□□□□ 0.59
CDK11A-220ENST00000492390 CLUAP1Q96AJ1 413 aa18.72■□□□□ 0.59
CDK11A-220ENST00000492390 ALDH8A1Q9H2A2 487 aaPredicted RBP18.72■□□□□ 0.59
CDK11A-220ENST00000492390 SLC38A10Q9HBR0 1119 aa18.72■□□□□ 0.59
CDK11A-220ENST00000492390 RAVER2Q9HCJ3 691 aaKnown RBP18.72■□□□□ 0.59
CDK11A-220ENST00000492390 LMCD1Q9NZU5 365 aa18.72■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms