RNA–Protein interactions for RNA: ENST00000491881.1

VTA1-204, Transcript of vesicle trafficking 1, humanhuman

TSL 2

Gene VTA1, Length 528 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-204ENST00000491881 INTS3Q68E01 1043 aaKnown RBP6.02□□□□□ -1.45
VTA1-204ENST00000491881 SLC9A7Q96T83 725 aa6.02□□□□□ -1.45
VTA1-204ENST00000491881 RTEL1Q9NZ71 1219 aa6.02□□□□□ -1.45
VTA1-204ENST00000491881 U2SURPO15042 1029 aaKnown RBP6.01□□□□□ -1.45
VTA1-204ENST00000491881 LRRN2O75325 713 aa6.01□□□□□ -1.45
VTA1-204ENST00000491881 ACRP10323 421 aa6.01□□□□□ -1.45
VTA1-204ENST00000491881 PI3P19957 117 aa6.01□□□□□ -1.45
VTA1-204ENST00000491881 CASP7P55210 303 aa6.01□□□□□ -1.45
VTA1-204ENST00000491881 ADGRF1Q5T601 910 aa6.01□□□□□ -1.45
VTA1-204ENST00000491881 SOGA3Q5TF21 947 aa6.01□□□□□ -1.45
VTA1-204ENST00000491881 LARP1BQ659C4 914 aaKnown RBP6.01□□□□□ -1.45
VTA1-204ENST00000491881 SIRT2Q8IXJ6 389 aa6.01□□□□□ -1.45
VTA1-204ENST00000491881 PMFBP1Q8TBY8 1022 aa6.01□□□□□ -1.45
VTA1-204ENST00000491881 RNF141Q8WVD5 230 aa6.01□□□□□ -1.45
VTA1-204ENST00000491881 HNRNPLLQ8WVV9 542 aaKnown RBP6.01□□□□□ -1.45
VTA1-204ENST00000491881 DHRS1Q96LJ7 313 aa6.01□□□□□ -1.45
VTA1-204ENST00000491881 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP6.01□□□□□ -1.45
VTA1-204ENST00000491881 EBF1Q9UH73 591 aa6.01□□□□□ -1.45
VTA1-204ENST00000491881 IRAK3Q9Y616 596 aa6.01□□□□□ -1.45
VTA1-204ENST00000491881 A0A1W2PQH9 124 aa6□□□□□ -1.45
VTA1-204ENST00000491881 CLEC3AO75596 197 aa6□□□□□ -1.45
VTA1-204ENST00000491881 UBOX5O94941 541 aa6□□□□□ -1.45
VTA1-204ENST00000491881 TEKQ02763 1124 aa6□□□□□ -1.45
VTA1-204ENST00000491881 ZYXQ15942 572 aaKnown RBP6□□□□□ -1.45
VTA1-204ENST00000491881 NBPF6Q5VWK0 638 aa6□□□□□ -1.45
VTA1-204ENST00000491881 UNC5AQ6ZN44 842 aa6□□□□□ -1.45
VTA1-204ENST00000491881 CXorf38Q8TB03 319 aa6□□□□□ -1.45
VTA1-204ENST00000491881 SHISA4Q96DD7 197 aa6□□□□□ -1.45
VTA1-204ENST00000491881 SIGLEC10Q96LC7 697 aa6□□□□□ -1.45
VTA1-204ENST00000491881 NBPF4Q96M43 638 aa6□□□□□ -1.45
VTA1-204ENST00000491881 SLC6A18Q96N87 628 aa6□□□□□ -1.45
VTA1-204ENST00000491881 XYLT2Q9H1B5 865 aa6□□□□□ -1.45
VTA1-204ENST00000491881 PHAXQ9H814 394 aaKnown RBP6□□□□□ -1.45
VTA1-204ENST00000491881 SIRT5Q9NXA8 310 aa6□□□□□ -1.45
VTA1-204ENST00000491881 IGSF3O75054 1194 aa5.99□□□□□ -1.45
VTA1-204ENST00000491881 RNF4P78317 190 aa5.99□□□□□ -1.45
VTA1-204ENST00000491881 SRSF3P84103 164 aaKnown RBP5.99□□□□□ -1.45
VTA1-204ENST00000491881 RBL2Q08999 1139 aa5.99□□□□□ -1.45
VTA1-204ENST00000491881 FXNQ16595 210 aa5.99□□□□□ -1.45
VTA1-204ENST00000491881 CLEC16AQ2KHT3 1053 aa5.99□□□□□ -1.45
VTA1-204ENST00000491881 BBS9Q3SYG4 887 aa5.99□□□□□ -1.45
VTA1-204ENST00000491881 ERICH6BQ5W0A0 696 aa5.99□□□□□ -1.45
VTA1-204ENST00000491881 PRRT2Q7Z6L0 340 aaPredicted RBP5.99□□□□□ -1.45
VTA1-204ENST00000491881 PANK1Q8TE04 598 aa5.99□□□□□ -1.45
VTA1-204ENST00000491881 LINC01599Q8WXQ3 324 aa5.99□□□□□ -1.45
VTA1-204ENST00000491881 MBD1Q9UIS9 605 aaPredicted RBP5.99□□□□□ -1.45
VTA1-204ENST00000491881 OTOL1A6NHN0 477 aaPredicted RBP5.98□□□□□ -1.45
VTA1-204ENST00000491881 AFF3P51826 1226 aaKnown RBP5.98□□□□□ -1.45
VTA1-204ENST00000491881 RAB33AQ14088 237 aa5.98□□□□□ -1.45
VTA1-204ENST00000491881 SKOR2Q2VWA4 1001 aaPredicted RBP5.98□□□□□ -1.45
VTA1-204ENST00000491881 TMEM192Q8IY95 271 aa5.98□□□□□ -1.45
VTA1-204ENST00000491881 KREMEN1Q96MU8 473 aa5.98□□□□□ -1.45
VTA1-204ENST00000491881 MKRN2Q9H000 416 aaKnown RBP5.98□□□□□ -1.45
VTA1-204ENST00000491881 SUCOQ9UBS9 1254 aaKnown RBP5.98□□□□□ -1.45
VTA1-204ENST00000491881 SHISA3A0PJX4 238 aa5.97□□□□□ -1.45
VTA1-204ENST00000491881 KLF4O43474 513 aa5.97□□□□□ -1.45
VTA1-204ENST00000491881 DDAH1O94760 285 aa5.97□□□□□ -1.45
VTA1-204ENST00000491881 CELA3BP08861 270 aa5.97□□□□□ -1.45
VTA1-204ENST00000491881 RPL10P27635 214 aaKnown RBP5.97□□□□□ -1.45
VTA1-204ENST00000491881 PMS1P54277 932 aaKnown RBP5.97□□□□□ -1.45
VTA1-204ENST00000491881 SLC7A5Q01650 507 aa5.97□□□□□ -1.45
VTA1-204ENST00000491881 GNPTABQ3T906 1256 aa5.97□□□□□ -1.45
VTA1-204ENST00000491881 TDRD10Q5VZ19 366 aaKnown RBP5.97□□□□□ -1.45
VTA1-204ENST00000491881 VHLLQ6RSH7 139 aa5.97□□□□□ -1.45
VTA1-204ENST00000491881 NLRX1Q86UT6 975 aa5.97□□□□□ -1.45
VTA1-204ENST00000491881 DACT3Q96B18 629 aaPredicted RBP5.97□□□□□ -1.45
VTA1-204ENST00000491881 ZNF512BQ96KM6 892 aaPredicted RBP5.97□□□□□ -1.45
VTA1-204ENST00000491881 ASPNQ9BXN1 380 aa5.97□□□□□ -1.45
VTA1-204ENST00000491881 ASCC2Q9H1I8 757 aaPredicted RBP5.97□□□□□ -1.45
VTA1-204ENST00000491881 FAM86C1Q9NVL1 165 aa5.97□□□□□ -1.45
VTA1-204ENST00000491881 ZMYM5Q9UJ78 669 aa5.97□□□□□ -1.45
VTA1-204ENST00000491881 ZNF214Q9UL59 606 aaPredicted RBP5.97□□□□□ -1.45
VTA1-204ENST00000491881 PCDHB10Q9UN67 800 aa5.97□□□□□ -1.45
VTA1-204ENST00000491881 LTBP3Q9NS15 1303 aa5.97□□□□□ -1.45
VTA1-204ENST00000491881 HRKO00198 91 aa5.96□□□□□ -1.46
VTA1-204ENST00000491881 USP2O75604 605 aaPredicted RBP5.96□□□□□ -1.46
VTA1-204ENST00000491881 EPHB3P54753 998 aa5.96□□□□□ -1.46
VTA1-204ENST00000491881 SLC14A2Q15849 920 aa5.96□□□□□ -1.46
VTA1-204ENST00000491881 DDR2Q16832 855 aa5.96□□□□□ -1.46
VTA1-204ENST00000491881 C6orf15Q6UXA7 325 aaPredicted RBP5.96□□□□□ -1.46
VTA1-204ENST00000491881 CCDC144CPQ8IYA2 1237 aa5.96□□□□□ -1.46
VTA1-204ENST00000491881 FEZF2Q8TBJ5 459 aa5.96□□□□□ -1.46
VTA1-204ENST00000491881 SMARCC1Q92922 1105 aaPredicted RBP5.96□□□□□ -1.46
VTA1-204ENST00000491881 G6PC3Q9BUM1 346 aa5.96□□□□□ -1.46
VTA1-204ENST00000491881 OSBPL2Q9H1P3 480 aa5.96□□□□□ -1.46
VTA1-204ENST00000491881 ST7Q9NRC1 585 aa5.96□□□□□ -1.46
VTA1-204ENST00000491881 CCDC85CA6NKD9 419 aa5.95□□□□□ -1.46
VTA1-204ENST00000491881 NOTOA8MTQ0 251 aa5.95□□□□□ -1.46
VTA1-204ENST00000491881 N4BP3O15049 544 aa5.95□□□□□ -1.46
VTA1-204ENST00000491881 TP53P04637 393 aaPredicted RBP5.95□□□□□ -1.46
VTA1-204ENST00000491881 NCAPHQ15003 741 aa5.95□□□□□ -1.46
VTA1-204ENST00000491881 NBPF12Q5TAG4 269 aaPredicted RBP5.95□□□□□ -1.46
VTA1-204ENST00000491881 KIAA1211LQ6NV74 962 aa5.95□□□□□ -1.46
VTA1-204ENST00000491881 FAM178BQ8IXR5 827 aa5.95□□□□□ -1.46
VTA1-204ENST00000491881 ZDHHC14Q8IZN3 488 aa5.95□□□□□ -1.46
VTA1-204ENST00000491881 CELF2-AS1Q8N7Q2 184 aa5.95□□□□□ -1.46
VTA1-204ENST00000491881 BORCS6Q96GS4 357 aa5.95□□□□□ -1.46
VTA1-204ENST00000491881 LNPKQ9C0E8 428 aa5.95□□□□□ -1.46
VTA1-204ENST00000491881 CRTAC1Q9NQ79 661 aa5.95□□□□□ -1.46
VTA1-204ENST00000491881 SIRPGQ9P1W8 387 aa5.95□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms