RNA–Protein interactions for RNA: ENST00000491668.1

SEC61A1-206, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 4

Gene SEC61A1, Length 558 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-206ENST00000491668 PPP4R3BQ5MIZ7 849 aa14.97□□□□□ -0.01
SEC61A1-206ENST00000491668 TTC22Q5TAA0 569 aa14.97□□□□□ -0.01
SEC61A1-206ENST00000491668 MFSD6Q6ZSS7 791 aa14.97□□□□□ -0.01
SEC61A1-206ENST00000491668 CHST13Q8NET6 341 aa14.97□□□□□ -0.01
SEC61A1-206ENST00000491668 CHURC1Q8WUH1 139 aa14.97□□□□□ -0.01
SEC61A1-206ENST00000491668 HOMER2Q9NSB8 354 aa14.97□□□□□ -0.01
SEC61A1-206ENST00000491668 DIAPH3Q9NSV4 1193 aa14.97□□□□□ -0.01
SEC61A1-206ENST00000491668 MCM3APO60318 1980 aa14.96□□□□□ -0.01
SEC61A1-206ENST00000491668 ASTN1O14525 1302 aa14.96□□□□□ -0.01
SEC61A1-206ENST00000491668 ADCY6O43306 1168 aa14.96□□□□□ -0.01
SEC61A1-206ENST00000491668 FDX1P10109 184 aa14.96□□□□□ -0.01
SEC61A1-206ENST00000491668 SLC16A2P36021 539 aa14.96□□□□□ -0.01
SEC61A1-206ENST00000491668 ATN1P54259 1190 aaPredicted RBP14.96□□□□□ -0.01
SEC61A1-206ENST00000491668 MFAP1P55081 439 aaKnown RBP14.96□□□□□ -0.01
SEC61A1-206ENST00000491668 CNTN2Q02246 1040 aa14.96□□□□□ -0.01
SEC61A1-206ENST00000491668 LRRC41Q15345 812 aa14.96□□□□□ -0.01
SEC61A1-206ENST00000491668 BTNL9Q6UXG8 535 aa14.96□□□□□ -0.01
SEC61A1-206ENST00000491668 FAM133AQ8N9E0 248 aa14.96□□□□□ -0.01
SEC61A1-206ENST00000491668 ARRDC4Q8NCT1 418 aa14.96□□□□□ -0.01
SEC61A1-206ENST00000491668 DCAF4Q8WV16 495 aa14.96□□□□□ -0.01
SEC61A1-206ENST00000491668 DDX11Q96FC9 970 aa14.96□□□□□ -0.01
SEC61A1-206ENST00000491668 ISY1Q9ULR0 285 aaKnown RBP14.96□□□□□ -0.01
SEC61A1-206ENST00000491668 SYNGAP1Q96PV0 1343 aa14.95□□□□□ -0.02
SEC61A1-206ENST00000491668 SNHG28P0DPA3 235 aa14.95□□□□□ -0.02
SEC61A1-206ENST00000491668 PDHBP11177 359 aa14.95□□□□□ -0.02
SEC61A1-206ENST00000491668 PCP11498 1178 aaKnown RBP14.95□□□□□ -0.02
SEC61A1-206ENST00000491668 MAGEA10P43363 369 aaPredicted RBP14.95□□□□□ -0.02
SEC61A1-206ENST00000491668 MUM1L1Q5H9M0 696 aa14.95□□□□□ -0.02
SEC61A1-206ENST00000491668 CCDC174Q6PII3 467 aa14.95□□□□□ -0.02
SEC61A1-206ENST00000491668 ZNF467Q7Z7K2 595 aaPredicted RBP14.95□□□□□ -0.02
SEC61A1-206ENST00000491668 MSL3Q8N5Y2 521 aaKnown RBP14.95□□□□□ -0.02
SEC61A1-206ENST00000491668 ZKSCAN3Q9BRR0 538 aa14.95□□□□□ -0.02
SEC61A1-206ENST00000491668 DSCC1Q9BVC3 393 aa14.95□□□□□ -0.02
SEC61A1-206ENST00000491668 KATNBL1Q9H079 304 aa14.95□□□□□ -0.02
SEC61A1-206ENST00000491668 A1CFQ9NQ94 594 aaKnown RBP14.95□□□□□ -0.02
SEC61A1-206ENST00000491668 RNF146Q9NTX7 359 aa14.95□□□□□ -0.02
SEC61A1-206ENST00000491668 FBXO40Q9UH90 709 aa14.95□□□□□ -0.02
SEC61A1-206ENST00000491668 CTDP1Q9Y5B0 961 aaPredicted RBP14.95□□□□□ -0.02
SEC61A1-206ENST00000491668 DDX49Q9Y6V7 483 aaKnown RBP14.95□□□□□ -0.02
SEC61A1-206ENST00000491668 FRMPD2Q68DX3 1309 aaPredicted RBP14.94□□□□□ -0.02
SEC61A1-206ENST00000491668 LCTP09848 1927 aa14.94□□□□□ -0.02
SEC61A1-206ENST00000491668 SOWAHBA6NEL2 793 aa14.94□□□□□ -0.02
SEC61A1-206ENST00000491668 HIP1O00291 1037 aa14.94□□□□□ -0.02
SEC61A1-206ENST00000491668 ZNF213O14771 459 aa14.94□□□□□ -0.02
SEC61A1-206ENST00000491668 PGK1P00558 417 aa14.94□□□□□ -0.02
SEC61A1-206ENST00000491668 ADCYAP1R1P41586 468 aa14.94□□□□□ -0.02
SEC61A1-206ENST00000491668 IRX5P78411 483 aaPredicted RBP14.94□□□□□ -0.02
SEC61A1-206ENST00000491668 IKQ13123 557 aaPredicted RBP14.94□□□□□ -0.02
SEC61A1-206ENST00000491668 SNX17Q15036 470 aa14.94□□□□□ -0.02
SEC61A1-206ENST00000491668 CCDC96Q2M329 555 aa14.94□□□□□ -0.02
SEC61A1-206ENST00000491668 ANKRD35Q8N283 1001 aa14.94□□□□□ -0.02
SEC61A1-206ENST00000491668 RANBP17Q9H2T7 1088 aaKnown RBP14.94□□□□□ -0.02
SEC61A1-206ENST00000491668 ACAD9Q9H845 621 aa14.94□□□□□ -0.02
SEC61A1-206ENST00000491668 GPCPD1Q9NPB8 672 aa14.94□□□□□ -0.02
SEC61A1-206ENST00000491668 XPNPEP3Q9NQH7 507 aa14.94□□□□□ -0.02
SEC61A1-206ENST00000491668 SOX1O00570 391 aaPredicted RBP14.93□□□□□ -0.02
SEC61A1-206ENST00000491668 KDM4AO75164 1064 aa14.93□□□□□ -0.02
SEC61A1-206ENST00000491668 ADAMTS4O75173 837 aa14.93□□□□□ -0.02
SEC61A1-206ENST00000491668 MYCNP04198 464 aaPredicted RBP14.93□□□□□ -0.02
SEC61A1-206ENST00000491668 ICAM1P05362 532 aa14.93□□□□□ -0.02
SEC61A1-206ENST00000491668 RARBP10826 455 aa14.93□□□□□ -0.02
SEC61A1-206ENST00000491668 ALAS1P13196 640 aa14.93□□□□□ -0.02
SEC61A1-206ENST00000491668 BMP8BP34820 402 aa14.93□□□□□ -0.02
SEC61A1-206ENST00000491668 ZNF543Q08ER8 600 aa14.93□□□□□ -0.02
SEC61A1-206ENST00000491668 SLC39A5Q6ZMH5 540 aa14.93□□□□□ -0.02
SEC61A1-206ENST00000491668 CCDC144CPQ8IYA2 1237 aa14.93□□□□□ -0.02
SEC61A1-206ENST00000491668 ESR2Q92731 530 aa14.93□□□□□ -0.02
SEC61A1-206ENST00000491668 FERMT2Q96AC1 680 aa14.93□□□□□ -0.02
SEC61A1-206ENST00000491668 TTC14Q96N46 770 aa14.93□□□□□ -0.02
SEC61A1-206ENST00000491668 TRERF1Q96PN7 1200 aa14.93□□□□□ -0.02
SEC61A1-206ENST00000491668 PURBQ96QR8 312 aaKnown RBP14.93□□□□□ -0.02
SEC61A1-206ENST00000491668 RNF41Q9H4P4 317 aaPredicted RBP14.93□□□□□ -0.02
SEC61A1-206ENST00000491668 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.93□□□□□ -0.02
SEC61A1-206ENST00000491668 PHF24Q9UPV7 400 aa14.93□□□□□ -0.02
SEC61A1-206ENST00000491668 CNPY2Q9Y2B0 182 aa14.93□□□□□ -0.02
SEC61A1-206ENST00000491668 B4E1Z4 1266 aa14.92□□□□□ -0.02
SEC61A1-206ENST00000491668 KBTBD13C9JR72 458 aa14.92□□□□□ -0.02
SEC61A1-206ENST00000491668 AKR1A1P14550 325 aa14.92□□□□□ -0.02
SEC61A1-206ENST00000491668 CHMLP26374 656 aa14.92□□□□□ -0.02
SEC61A1-206ENST00000491668 RTP1P59025 263 aa14.92□□□□□ -0.02
SEC61A1-206ENST00000491668 ACVR2BQ13705 512 aa14.92□□□□□ -0.02
SEC61A1-206ENST00000491668 TKFCQ3LXA3 575 aa14.92□□□□□ -0.02
SEC61A1-206ENST00000491668 SYDE2Q5VT97 1194 aa14.92□□□□□ -0.02
SEC61A1-206ENST00000491668 CCSAPQ6IQ19 270 aaPredicted RBP14.92□□□□□ -0.02
SEC61A1-206ENST00000491668 ARMCX2Q7L311 632 aa14.92□□□□□ -0.02
SEC61A1-206ENST00000491668 ANKS1AQ92625 1134 aa14.92□□□□□ -0.02
SEC61A1-206ENST00000491668 CPVLQ9H3G5 476 aa14.92□□□□□ -0.02
SEC61A1-206ENST00000491668 ZSWIM5Q9P217 1185 aa14.92□□□□□ -0.02
SEC61A1-206ENST00000491668 SYNRGQ9UMZ2 1314 aa14.92□□□□□ -0.02
SEC61A1-206ENST00000491668 A0A1W2PPC1 479 aa14.91□□□□□ -0.02
SEC61A1-206ENST00000491668 MYADML2A6NDP7 307 aa14.91□□□□□ -0.02
SEC61A1-206ENST00000491668 POTEB2H3BUK9 544 aa14.91□□□□□ -0.02
SEC61A1-206ENST00000491668 PTH1RQ03431 593 aa14.91□□□□□ -0.02
SEC61A1-206ENST00000491668 BMP2KLQ5H9B9 411 aa14.91□□□□□ -0.02
SEC61A1-206ENST00000491668 DGKHQ86XP1 1220 aa14.91□□□□□ -0.02
SEC61A1-206ENST00000491668 ENAHQ8N8S7 591 aaPredicted RBP14.91□□□□□ -0.02
SEC61A1-206ENST00000491668 KLHDC9Q8NEP7 349 aa14.91□□□□□ -0.02
SEC61A1-206ENST00000491668 CYP39A1Q9NYL5 469 aa14.91□□□□□ -0.02
SEC61A1-206ENST00000491668 ZHX1Q9UKY1 873 aaPredicted RBP14.91□□□□□ -0.02
SEC61A1-206ENST00000491668 CCPG1Q9ULG6 757 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 90.9 ms