RNA–Protein interactions for RNA: ENST00000491467.1

SRGAP3-210, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 4

Gene SRGAP3, Length 540 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-210ENST00000491467 PPP1R12BO60237 982 aaPredicted RBP13.7□□□□□ -0.22
SRGAP3-210ENST00000491467 FKBP1AP62942 108 aaKnown RBP13.7□□□□□ -0.22
SRGAP3-210ENST00000491467 MDM2Q00987 491 aaPredicted RBP13.7□□□□□ -0.22
SRGAP3-210ENST00000491467 CAMK4Q16566 473 aa13.7□□□□□ -0.22
SRGAP3-210ENST00000491467 USP38Q8NB14 1042 aa13.7□□□□□ -0.22
SRGAP3-210ENST00000491467 SH3RF3Q8TEJ3 882 aaPredicted RBP13.7□□□□□ -0.22
SRGAP3-210ENST00000491467 DEFB118Q96PH6 123 aa13.7□□□□□ -0.22
SRGAP3-210ENST00000491467 LZTS2Q9BRK4 669 aa13.7□□□□□ -0.22
SRGAP3-210ENST00000491467 MRIQ9BWK5 157 aa13.7□□□□□ -0.22
SRGAP3-210ENST00000491467 MKNK2Q9HBH9 465 aa13.7□□□□□ -0.22
SRGAP3-210ENST00000491467 SH3GLB2Q9NR46 395 aa13.7□□□□□ -0.22
SRGAP3-210ENST00000491467 ANO10Q9NW15 660 aa13.7□□□□□ -0.22
SRGAP3-210ENST00000491467 USP25Q9UHP3 1055 aa13.7□□□□□ -0.22
SRGAP3-210ENST00000491467 CYP2D7A0A087X1C5 515 aa13.69□□□□□ -0.22
SRGAP3-210ENST00000491467 CAPN2P17655 700 aa13.69□□□□□ -0.22
SRGAP3-210ENST00000491467 BTDP43251 543 aa13.69□□□□□ -0.22
SRGAP3-210ENST00000491467 FUT2Q10981 343 aa13.69□□□□□ -0.22
SRGAP3-210ENST00000491467 PTPAQ15257 358 aa13.69□□□□□ -0.22
SRGAP3-210ENST00000491467 STX1AQ16623 288 aa13.69□□□□□ -0.22
SRGAP3-210ENST00000491467 TPRNQ4KMQ1 711 aa13.69□□□□□ -0.22
SRGAP3-210ENST00000491467 MFSD14BQ5SR56 506 aa13.69□□□□□ -0.22
SRGAP3-210ENST00000491467 AXDND1Q5T1B0 1012 aaPredicted RBP13.69□□□□□ -0.22
SRGAP3-210ENST00000491467 TMTC3Q6ZXV5 915 aa13.69□□□□□ -0.22
SRGAP3-210ENST00000491467 DIS3L2Q8IYB7 885 aaKnown RBP13.69□□□□□ -0.22
SRGAP3-210ENST00000491467 ZNF579Q8NAF0 562 aaKnown RBP13.69□□□□□ -0.22
SRGAP3-210ENST00000491467 DIS3LQ8TF46 1054 aaKnown RBP13.69□□□□□ -0.22
SRGAP3-210ENST00000491467 ATXN2LQ8WWM7 1075 aaKnown RBP13.69□□□□□ -0.22
SRGAP3-210ENST00000491467 AIFM3Q96NN9 605 aa13.69□□□□□ -0.22
SRGAP3-210ENST00000491467 NAT10Q9H0A0 1025 aaKnown RBP13.69□□□□□ -0.22
SRGAP3-210ENST00000491467 KAT14Q9H8E8 782 aa13.69□□□□□ -0.22
SRGAP3-210ENST00000491467 NOL7Q9UMY1 257 aaKnown RBP13.69□□□□□ -0.22
SRGAP3-210ENST00000491467 MGAMO43451 1857 aa13.69□□□□□ -0.22
SRGAP3-210ENST00000491467 PPFIA3O75145 1194 aa13.68□□□□□ -0.22
SRGAP3-210ENST00000491467 OSBPP22059 807 aa13.68□□□□□ -0.22
SRGAP3-210ENST00000491467 MSNP26038 577 aaKnown RBP13.68□□□□□ -0.22
SRGAP3-210ENST00000491467 SMARCA1P28370 1054 aa13.68□□□□□ -0.22
SRGAP3-210ENST00000491467 PSMC4P43686 418 aa13.68□□□□□ -0.22
SRGAP3-210ENST00000491467 TFAP4Q01664 338 aa13.68□□□□□ -0.22
SRGAP3-210ENST00000491467 C16orf86Q6ZW13 317 aa13.68□□□□□ -0.22
SRGAP3-210ENST00000491467 TEX11Q8IYF3 940 aa13.68□□□□□ -0.22
SRGAP3-210ENST00000491467 STK11IPQ8N1F8 1099 aa13.68□□□□□ -0.22
SRGAP3-210ENST00000491467 TGFBRAP1Q8WUH2 860 aa13.68□□□□□ -0.22
SRGAP3-210ENST00000491467 ASB2Q96Q27 587 aa13.68□□□□□ -0.22
SRGAP3-210ENST00000491467 SDF4Q9BRK5 362 aa13.68□□□□□ -0.22
SRGAP3-210ENST00000491467 PHF20Q9BVI0 1012 aa13.68□□□□□ -0.22
SRGAP3-210ENST00000491467 FTOQ9C0B1 505 aaKnown RBP eCLIP13.68□□□□□ -0.22
SRGAP3-210ENST00000491467 GOLPH3LQ9H4A5 285 aa13.68□□□□□ -0.22
SRGAP3-210ENST00000491467 MYPNQ86TC9 1320 aa13.67□□□□□ -0.22
SRGAP3-210ENST00000491467 GOLGA6L6A8MZA4 724 aa13.67□□□□□ -0.22
SRGAP3-210ENST00000491467 WNT10BO00744 389 aa13.67□□□□□ -0.22
SRGAP3-210ENST00000491467 TLR2O60603 784 aa13.67□□□□□ -0.22
SRGAP3-210ENST00000491467 PRDM1O75626 825 aa13.67□□□□□ -0.22
SRGAP3-210ENST00000491467 ZNF202O95125 648 aa13.67□□□□□ -0.22
SRGAP3-210ENST00000491467 CALML3P27482 149 aa13.67□□□□□ -0.22
SRGAP3-210ENST00000491467 KRT2P35908 639 aa13.67□□□□□ -0.22
SRGAP3-210ENST00000491467 PKN1Q16512 942 aa13.67□□□□□ -0.22
SRGAP3-210ENST00000491467 ANO6Q4KMQ2 910 aa13.67□□□□□ -0.22
SRGAP3-210ENST00000491467 GALNT17Q6IS24 598 aa13.67□□□□□ -0.22
SRGAP3-210ENST00000491467 HHIPL2Q6UWX4 724 aa13.67□□□□□ -0.22
SRGAP3-210ENST00000491467 PODNQ7Z5L7 613 aa13.67□□□□□ -0.22
SRGAP3-210ENST00000491467 CKAP2LQ8IYA6 745 aa13.67□□□□□ -0.22
SRGAP3-210ENST00000491467 GJB4Q9NTQ9 266 aa13.67□□□□□ -0.22
SRGAP3-210ENST00000491467 HOOK1Q9UJC3 728 aaKnown RBP13.67□□□□□ -0.22
SRGAP3-210ENST00000491467 HPSEQ9Y251 543 aa13.67□□□□□ -0.22
SRGAP3-210ENST00000491467 MYO3BQ8WXR4 1341 aa13.66□□□□□ -0.22
SRGAP3-210ENST00000491467 CDH23Q9H251 3354 aa13.66□□□□□ -0.22
SRGAP3-210ENST00000491467 CCL15-CCL14A0A0B4J2E2 113 aa13.66□□□□□ -0.22
SRGAP3-210ENST00000491467 BTBD18B2RXH4 712 aa13.66□□□□□ -0.22
SRGAP3-210ENST00000491467 ADCY5O95622 1261 aa13.66□□□□□ -0.22
SRGAP3-210ENST00000491467 TSPY3P0CV98 308 aa13.66□□□□□ -0.22
SRGAP3-210ENST00000491467 TSPY8P0CW00 308 aa13.66□□□□□ -0.22
SRGAP3-210ENST00000491467 GUCY1A2P33402 732 aa13.66□□□□□ -0.22
SRGAP3-210ENST00000491467 TRAPPC10P48553 1259 aa13.66□□□□□ -0.22
SRGAP3-210ENST00000491467 ZNF165P49910 485 aa13.66□□□□□ -0.22
SRGAP3-210ENST00000491467 RHBDL3P58872 404 aa13.66□□□□□ -0.22
SRGAP3-210ENST00000491467 HDLBPQ00341 1268 aaKnown RBP13.66□□□□□ -0.22
SRGAP3-210ENST00000491467 GRM4Q14833 912 aa13.66□□□□□ -0.22
SRGAP3-210ENST00000491467 DIXDC1Q155Q3 683 aa13.66□□□□□ -0.22
SRGAP3-210ENST00000491467 ZRSR1Q15695 479 aaKnown RBP13.66□□□□□ -0.22
SRGAP3-210ENST00000491467 CCL15Q16663 113 aa13.66□□□□□ -0.22
SRGAP3-210ENST00000491467 TMEM31Q5JXX7 168 aa13.66□□□□□ -0.22
SRGAP3-210ENST00000491467 PPP4R3BQ5MIZ7 849 aa13.66□□□□□ -0.22
SRGAP3-210ENST00000491467 RESP18Q5W5W9 173 aa13.66□□□□□ -0.22
SRGAP3-210ENST00000491467 RCSD1Q6JBY9 416 aa13.66□□□□□ -0.22
SRGAP3-210ENST00000491467 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.66□□□□□ -0.22
SRGAP3-210ENST00000491467 APOBEC3FQ8IUX4 373 aaKnown RBP13.66□□□□□ -0.22
SRGAP3-210ENST00000491467 KRI1Q8N9T8 703 aaKnown RBP13.66□□□□□ -0.22
SRGAP3-210ENST00000491467 NEDD1Q8NHV4 660 aa13.66□□□□□ -0.22
SRGAP3-210ENST00000491467 BRI3BPQ8WY22 251 aa13.66□□□□□ -0.22
SRGAP3-210ENST00000491467 CCDC34Q96HJ3 373 aa13.66□□□□□ -0.22
SRGAP3-210ENST00000491467 KIAA1468Q9P260 1216 aa13.66□□□□□ -0.22
SRGAP3-210ENST00000491467 V9GY48 417 aaPredicted RBP13.66□□□□□ -0.22
SRGAP3-210ENST00000491467 MYH4Q9Y623 1939 aa13.66□□□□□ -0.22
SRGAP3-210ENST00000491467 CNTNAP5Q8WYK1 1306 aa13.65□□□□□ -0.22
SRGAP3-210ENST00000491467 A0A1B0GVL5 298 aa13.65□□□□□ -0.22
SRGAP3-210ENST00000491467 UNCXA6NJT0 531 aa13.65□□□□□ -0.22
SRGAP3-210ENST00000491467 PTMAP06454 111 aaKnown RBP13.65□□□□□ -0.22
SRGAP3-210ENST00000491467 CYP2D6P10635 497 aa13.65□□□□□ -0.22
SRGAP3-210ENST00000491467 SCG2P13521 617 aa13.65□□□□□ -0.22
SRGAP3-210ENST00000491467 PTPREP23469 700 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms