RNA–Protein interactions for RNA: ENST00000491402.5

VCPKMT-204, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 1 (best)

Gene VCPKMT, Length 1,793 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-204ENST00000491402 GPAT2Q6NUI2 795 aa25.1■■□□□ 1.61
VCPKMT-204ENST00000491402 IFNL1Q8IU54 200 aa25.1■■□□□ 1.61
VCPKMT-204ENST00000491402 FAM43AQ8N2R8 423 aa25.1■■□□□ 1.61
VCPKMT-204ENST00000491402 GPKOWQ92917 476 aaPredicted RBP eCLIP25.1■■□□□ 1.61
VCPKMT-204ENST00000491402 CIZ1Q9ULV3 898 aaPredicted RBP25.1■■□□□ 1.61
VCPKMT-204ENST00000491402 STX6O43752 255 aa25.1■■□□□ 1.61
VCPKMT-204ENST00000491402 HOXA7P31268 230 aaPredicted RBP25.1■■□□□ 1.61
VCPKMT-204ENST00000491402 SNAP25P60880 206 aa25.1■■□□□ 1.61
VCPKMT-204ENST00000491402 QRICH1Q2TAL8 776 aa25.1■■□□□ 1.61
VCPKMT-204ENST00000491402 REM2Q8IYK8 340 aaPredicted RBP25.1■■□□□ 1.61
VCPKMT-204ENST00000491402 RANBP17Q9H2T7 1088 aaKnown RBP25.1■■□□□ 1.61
VCPKMT-204ENST00000491402 COL11A1P12107 1806 aaPredicted RBP25.09■■□□□ 1.61
VCPKMT-204ENST00000491402 COG2Q14746 738 aa25.09■■□□□ 1.61
VCPKMT-204ENST00000491402 WWC2Q6AWC2 1192 aa25.09■■□□□ 1.61
VCPKMT-204ENST00000491402 HEATR3Q7Z4Q2 680 aa25.09■■□□□ 1.61
VCPKMT-204ENST00000491402 VPS54Q9P1Q0 977 aa25.09■■□□□ 1.61
VCPKMT-204ENST00000491402 PPP1R11O60927 126 aaPredicted RBP25.08■■□□□ 1.61
VCPKMT-204ENST00000491402 FBXO18Q8NFZ0 1043 aa25.08■■□□□ 1.61
VCPKMT-204ENST00000491402 SHISA4Q96DD7 197 aa25.08■■□□□ 1.61
VCPKMT-204ENST00000491402 BARHL2Q9NY43 387 aa25.08■■□□□ 1.61
VCPKMT-204ENST00000491402 VPS37CA5D8V6 355 aaPredicted RBP25.08■■□□□ 1.6
VCPKMT-204ENST00000491402 H3BQV1 296 aa25.08■■□□□ 1.6
VCPKMT-204ENST00000491402 PDHXO00330 501 aa25.08■■□□□ 1.6
VCPKMT-204ENST00000491402 PDIA4P13667 645 aaKnown RBP25.08■■□□□ 1.6
VCPKMT-204ENST00000491402 XBP1P17861 261 aa25.08■■□□□ 1.6
VCPKMT-204ENST00000491402 GUCY1B3Q02153 619 aa25.08■■□□□ 1.6
VCPKMT-204ENST00000491402 IFFO2Q5TF58 517 aa25.08■■□□□ 1.6
VCPKMT-204ENST00000491402 OTUD7BQ6GQQ9 843 aa25.08■■□□□ 1.6
VCPKMT-204ENST00000491402 ANKRD23Q86SG2 305 aa25.08■■□□□ 1.6
VCPKMT-204ENST00000491402 CHMP5Q9NZZ3 219 aa25.08■■□□□ 1.6
VCPKMT-204ENST00000491402 MYPNQ86TC9 1320 aa25.07■■□□□ 1.6
VCPKMT-204ENST00000491402 SMCHD1A6NHR9 2005 aa25.07■■□□□ 1.6
VCPKMT-204ENST00000491402 hCG_1984214I3L0E3 225 aa25.07■■□□□ 1.6
VCPKMT-204ENST00000491402 DSG3P32926 999 aa25.07■■□□□ 1.6
VCPKMT-204ENST00000491402 TRIM29Q14134 588 aa25.07■■□□□ 1.6
VCPKMT-204ENST00000491402 ZNF713Q8N859 430 aaPredicted RBP25.07■■□□□ 1.6
VCPKMT-204ENST00000491402 ATG4CQ96DT6 458 aa25.07■■□□□ 1.6
VCPKMT-204ENST00000491402 MTMR6Q9Y217 621 aa25.07■■□□□ 1.6
VCPKMT-204ENST00000491402 STXBP3O00186 592 aa25.06■■□□□ 1.6
VCPKMT-204ENST00000491402 KRT40Q6A162 431 aa25.06■■□□□ 1.6
VCPKMT-204ENST00000491402 TYW1BQ6NUM6 668 aa25.06■■□□□ 1.6
VCPKMT-204ENST00000491402 RGS22Q8NE09 1264 aa25.06■■□□□ 1.6
VCPKMT-204ENST00000491402 SLC38A10Q9HBR0 1119 aa25.06■■□□□ 1.6
VCPKMT-204ENST00000491402 SH3GLB2Q9NR46 395 aa25.06■■□□□ 1.6
VCPKMT-204ENST00000491402 HOXC10Q9NYD6 342 aa25.06■■□□□ 1.6
VCPKMT-204ENST00000491402 THSD7BQ9C0I4 1608 aa25.06■■□□□ 1.6
VCPKMT-204ENST00000491402 SPDYE16A6NNV3 312 aaPredicted RBP25.05■■□□□ 1.6
VCPKMT-204ENST00000491402 VWA5AO00534 786 aa25.05■■□□□ 1.6
VCPKMT-204ENST00000491402 IRX3P78415 501 aaPredicted RBP25.05■■□□□ 1.6
VCPKMT-204ENST00000491402 NUCB2P80303 420 aa25.05■■□□□ 1.6
VCPKMT-204ENST00000491402 PABPC4Q13310 644 aaKnown RBP eCLIP25.05■■□□□ 1.6
VCPKMT-204ENST00000491402 AMNQ9BXJ7 453 aa25.05■■□□□ 1.6
VCPKMT-204ENST00000491402 ASCC2Q9H1I8 757 aaPredicted RBP25.05■■□□□ 1.6
VCPKMT-204ENST00000491402 ADAMTS5Q9UNA0 930 aa25.05■■□□□ 1.6
VCPKMT-204ENST00000491402 A0A0G2JMZ2 1700 aa25.05■■□□□ 1.6
VCPKMT-204ENST00000491402 FDX1P10109 184 aa25.05■■□□□ 1.6
VCPKMT-204ENST00000491402 CCDC174Q6PII3 467 aa25.05■■□□□ 1.6
VCPKMT-204ENST00000491402 COA7Q96BR5 231 aa25.05■■□□□ 1.6
VCPKMT-204ENST00000491402 KCNJ14Q9UNX9 436 aa25.05■■□□□ 1.6
VCPKMT-204ENST00000491402 ZDHHC9Q9Y397 364 aa25.05■■□□□ 1.6
VCPKMT-204ENST00000491402 BRD1O95696 1058 aa25.04■■□□□ 1.6
VCPKMT-204ENST00000491402 NAPAP54920 295 aa25.04■■□□□ 1.6
VCPKMT-204ENST00000491402 MAP2K1Q02750 393 aaPredicted RBP25.04■■□□□ 1.6
VCPKMT-204ENST00000491402 FBXO11Q86XK2 927 aa25.04■■□□□ 1.6
VCPKMT-204ENST00000491402 PHF20Q9BVI0 1012 aa25.04■■□□□ 1.6
VCPKMT-204ENST00000491402 TRPA1O75762 1119 aa25.03■■□□□ 1.6
VCPKMT-204ENST00000491402 CCDC148Q8NFR7 591 aa25.03■■□□□ 1.6
VCPKMT-204ENST00000491402 RNF186Q9NXI6 227 aa25.03■■□□□ 1.6
VCPKMT-204ENST00000491402 SLC45A1Q9Y2W3 748 aa25.03■■□□□ 1.6
VCPKMT-204ENST00000491402 PCDHA1Q9Y5I3 950 aa25.03■■□□□ 1.6
VCPKMT-204ENST00000491402 ZNF536O15090 1300 aa25.03■■□□□ 1.6
VCPKMT-204ENST00000491402 ZBED4O75132 1171 aa25.03■■□□□ 1.6
VCPKMT-204ENST00000491402 MMP1P03956 469 aa25.03■■□□□ 1.6
VCPKMT-204ENST00000491402 ZSCAN22P10073 491 aaPredicted RBP25.03■■□□□ 1.6
VCPKMT-204ENST00000491402 CYP2C8P10632 490 aa25.03■■□□□ 1.6
VCPKMT-204ENST00000491402 USH1GQ495M9 461 aa25.03■■□□□ 1.6
VCPKMT-204ENST00000491402 FAM177A1Q8N128 213 aaPredicted RBP25.03■■□□□ 1.6
VCPKMT-204ENST00000491402 CCDC12Q8WUD4 166 aaPredicted RBP25.03■■□□□ 1.6
VCPKMT-204ENST00000491402 ALDH1A1P00352 501 aa25.02■■□□□ 1.6
VCPKMT-204ENST00000491402 ICAM1P05362 532 aa25.02■■□□□ 1.6
VCPKMT-204ENST00000491402 OSBPP22059 807 aa25.02■■□□□ 1.6
VCPKMT-204ENST00000491402 TAF1CQ15572 869 aaPredicted RBP25.02■■□□□ 1.6
VCPKMT-204ENST00000491402 JMYQ8N9B5 988 aa25.02■■□□□ 1.6
VCPKMT-204ENST00000491402 REPS2Q8NFH8 660 aa25.02■■□□□ 1.6
VCPKMT-204ENST00000491402 P2RX7Q99572 595 aaKnown RBP25.02■■□□□ 1.6
VCPKMT-204ENST00000491402 PNMA3Q9UL41 463 aa25.02■■□□□ 1.6
VCPKMT-204ENST00000491402 CTDP1Q9Y5B0 961 aaPredicted RBP25.02■■□□□ 1.6
VCPKMT-204ENST00000491402 NLRP5P59047 1200 aa25.01■■□□□ 1.59
VCPKMT-204ENST00000491402 HERVK_113P62684 666 aa25.01■■□□□ 1.59
VCPKMT-204ENST00000491402 FOXD4L5Q5VV16 416 aaPredicted RBP25.01■■□□□ 1.59
VCPKMT-204ENST00000491402 PPP1R18Q6NYC8 613 aa25.01■■□□□ 1.59
VCPKMT-204ENST00000491402 FOXD4L4Q8WXT5 416 aaPredicted RBP25.01■■□□□ 1.59
VCPKMT-204ENST00000491402 ZCCHC17Q9NP64 241 aaKnown RBP25.01■■□□□ 1.59
VCPKMT-204ENST00000491402 TAL1P17542 331 aaPredicted RBP25■■□□□ 1.59
VCPKMT-204ENST00000491402 NPY5RQ15761 445 aa25■■□□□ 1.59
VCPKMT-204ENST00000491402 LBX2Q6XYB7 198 aa25■■□□□ 1.59
VCPKMT-204ENST00000491402 CPXCR1Q8N123 301 aa25■■□□□ 1.59
VCPKMT-204ENST00000491402 BEGAINQ9BUH8 593 aa25■■□□□ 1.59
VCPKMT-204ENST00000491402 ZMYND12Q9H0C1 365 aa25■■□□□ 1.59
VCPKMT-204ENST00000491402 WBP1LQ9NX94 342 aa25■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms