RNA–Protein interactions for RNA: ENST00000491064.5

CTDSP1-210, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 786 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-210ENST00000491064 CTR9Q6PD62 1173 aa16.38■□□□□ 0.21
CTDSP1-210ENST00000491064 ARMCX2Q7L311 632 aa16.38■□□□□ 0.21
CTDSP1-210ENST00000491064 CPXCR1Q8N123 301 aa16.38■□□□□ 0.21
CTDSP1-210ENST00000491064 PRPF38AQ8NAV1 312 aaKnown RBP16.38■□□□□ 0.21
CTDSP1-210ENST00000491064 IL27Q8NEV9 243 aa16.38■□□□□ 0.21
CTDSP1-210ENST00000491064 KIF1BPQ96EK5 621 aa16.38■□□□□ 0.21
CTDSP1-210ENST00000491064 DDRGK1Q96HY6 314 aa16.38■□□□□ 0.21
CTDSP1-210ENST00000491064 KATNBL1Q9H079 304 aa16.38■□□□□ 0.21
CTDSP1-210ENST00000491064 MTIF3Q9H2K0 278 aaKnown RBP16.38■□□□□ 0.21
CTDSP1-210ENST00000491064 SLC28A3Q9HAS3 691 aa16.38■□□□□ 0.21
CTDSP1-210ENST00000491064 TRANK1O15050 2925 aa16.38■□□□□ 0.21
CTDSP1-210ENST00000491064 F5H6K3 240 aa16.37■□□□□ 0.21
CTDSP1-210ENST00000491064 NDUFB10O96000 172 aa16.37■□□□□ 0.21
CTDSP1-210ENST00000491064 FGBP02675 491 aa16.37■□□□□ 0.21
CTDSP1-210ENST00000491064 SLC4A3P48751 1232 aa16.37■□□□□ 0.21
CTDSP1-210ENST00000491064 NKX3-2P78367 333 aa16.37■□□□□ 0.21
CTDSP1-210ENST00000491064 KLRC3Q07444 240 aa16.37■□□□□ 0.21
CTDSP1-210ENST00000491064 ANKRD35Q8N283 1001 aa16.37■□□□□ 0.21
CTDSP1-210ENST00000491064 SLC43A3Q8NBI5 491 aa16.37■□□□□ 0.21
CTDSP1-210ENST00000491064 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.37■□□□□ 0.21
CTDSP1-210ENST00000491064 BOLA2Q9H3K6 86 aa16.37■□□□□ 0.21
CTDSP1-210ENST00000491064 SLC4A4Q9Y6R1 1079 aa16.37■□□□□ 0.21
CTDSP1-210ENST00000491064 PRRC2BQ5JSZ5 2229 aaKnown RBP16.36■□□□□ 0.21
CTDSP1-210ENST00000491064 ZBED4O75132 1171 aa16.36■□□□□ 0.21
CTDSP1-210ENST00000491064 RASA1P20936 1047 aa16.36■□□□□ 0.21
CTDSP1-210ENST00000491064 BEX3Q00994 111 aa16.36■□□□□ 0.21
CTDSP1-210ENST00000491064 UBE3CQ15386 1083 aa16.36■□□□□ 0.21
CTDSP1-210ENST00000491064 OTOP2Q7RTS6 562 aa16.36■□□□□ 0.21
CTDSP1-210ENST00000491064 CCDC144CPQ8IYA2 1237 aa16.36■□□□□ 0.21
CTDSP1-210ENST00000491064 FAM122AQ96E09 287 aa16.36■□□□□ 0.21
CTDSP1-210ENST00000491064 HIPK3Q9H422 1215 aa16.36■□□□□ 0.21
CTDSP1-210ENST00000491064 SLC38A10Q9HBR0 1119 aa16.36■□□□□ 0.21
CTDSP1-210ENST00000491064 RAVER2Q9HCJ3 691 aaKnown RBP16.36■□□□□ 0.21
CTDSP1-210ENST00000491064 NYAP2Q9P242 653 aa16.36■□□□□ 0.21
CTDSP1-210ENST00000491064 ARPP21Q9UBL0 812 aaPredicted RBP16.36■□□□□ 0.21
CTDSP1-210ENST00000491064 ASTN1O14525 1302 aa16.36■□□□□ 0.21
CTDSP1-210ENST00000491064 UMODL1Q5DID0 1318 aa16.36■□□□□ 0.21
CTDSP1-210ENST00000491064 CCER2I3L3R5 266 aa16.35■□□□□ 0.21
CTDSP1-210ENST00000491064 CHST13Q8NET6 341 aa16.35■□□□□ 0.21
CTDSP1-210ENST00000491064 KIFC2Q96AC6 838 aa16.35■□□□□ 0.21
CTDSP1-210ENST00000491064 NECAB3Q96P71 396 aaPredicted RBP16.35■□□□□ 0.21
CTDSP1-210ENST00000491064 TSPYL2Q9H2G4 693 aaPredicted RBP16.35■□□□□ 0.21
CTDSP1-210ENST00000491064 FBXO40Q9UH90 709 aa16.35■□□□□ 0.21
CTDSP1-210ENST00000491064 CTDP1Q9Y5B0 961 aaPredicted RBP16.35■□□□□ 0.21
CTDSP1-210ENST00000491064 LRRC37A2A6NM11 1700 aa16.34■□□□□ 0.21
CTDSP1-210ENST00000491064 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.34■□□□□ 0.21
CTDSP1-210ENST00000491064 BMP1P13497 986 aa16.34■□□□□ 0.21
CTDSP1-210ENST00000491064 ATP5JP18859 108 aa16.34■□□□□ 0.21
CTDSP1-210ENST00000491064 RABGGTBP53611 331 aa16.34■□□□□ 0.21
CTDSP1-210ENST00000491064 CXCL17Q6UXB2 119 aa16.34■□□□□ 0.21
CTDSP1-210ENST00000491064 HAUS7Q99871 368 aa16.34■□□□□ 0.21
CTDSP1-210ENST00000491064 NOC4LQ9BVI4 516 aaKnown RBP16.34■□□□□ 0.21
CTDSP1-210ENST00000491064 PUS7LQ9H0K6 701 aaKnown RBP16.34■□□□□ 0.21
CTDSP1-210ENST00000491064 BCL11AQ9H165 835 aa16.34■□□□□ 0.21
CTDSP1-210ENST00000491064 CABYRO75952 493 aa16.33■□□□□ 0.2
CTDSP1-210ENST00000491064 OAZ1P54368 228 aa16.33■□□□□ 0.2
CTDSP1-210ENST00000491064 CCL23P55773 120 aa16.33■□□□□ 0.2
CTDSP1-210ENST00000491064 CNTN2Q02246 1040 aa16.33■□□□□ 0.2
CTDSP1-210ENST00000491064 TNFAIP2Q03169 654 aa16.33■□□□□ 0.2
CTDSP1-210ENST00000491064 TFF2Q03403 129 aa16.33■□□□□ 0.2
CTDSP1-210ENST00000491064 PPP2R2DQ66LE6 453 aa16.33■□□□□ 0.2
CTDSP1-210ENST00000491064 MICALL1Q8N3F8 863 aa16.33■□□□□ 0.2
CTDSP1-210ENST00000491064 C1QTNF1Q9BXJ1 281 aa16.33■□□□□ 0.2
CTDSP1-210ENST00000491064 WNT8AQ9H1J5 351 aa16.33■□□□□ 0.2
CTDSP1-210ENST00000491064 MKNK2Q9HBH9 465 aa16.33■□□□□ 0.2
CTDSP1-210ENST00000491064 CLIP2Q9UDT6 1046 aa16.33■□□□□ 0.2
CTDSP1-210ENST00000491064 FEM1BQ9UK73 627 aa16.33■□□□□ 0.2
CTDSP1-210ENST00000491064 GNEQ9Y223 722 aaKnown RBP16.33■□□□□ 0.2
CTDSP1-210ENST00000491064 GRIN2DO15399 1336 aa16.33■□□□□ 0.2
CTDSP1-210ENST00000491064 IGKV6D-41A0A0C4DH26 115 aa16.32■□□□□ 0.2
CTDSP1-210ENST00000491064 MYOGP15173 224 aa16.32■□□□□ 0.2
CTDSP1-210ENST00000491064 ITGA7Q13683 1181 aa16.32■□□□□ 0.2
CTDSP1-210ENST00000491064 SBK1Q52WX2 424 aa16.32■□□□□ 0.2
CTDSP1-210ENST00000491064 NOL8Q76FK4 1167 aaKnown RBP16.32■□□□□ 0.2
CTDSP1-210ENST00000491064 TLK2Q86UE8 772 aa16.32■□□□□ 0.2
CTDSP1-210ENST00000491064 STK11IPQ8N1F8 1099 aa16.32■□□□□ 0.2
CTDSP1-210ENST00000491064 FAM133AQ8N9E0 248 aa16.32■□□□□ 0.2
CTDSP1-210ENST00000491064 PANK1Q8TE04 598 aa16.32■□□□□ 0.2
CTDSP1-210ENST00000491064 VWCEQ96DN2 955 aa16.32■□□□□ 0.2
CTDSP1-210ENST00000491064 HOMER2Q9NSB8 354 aa16.32■□□□□ 0.2
CTDSP1-210ENST00000491064 PCDHA11Q9Y5I1 949 aa16.32■□□□□ 0.2
CTDSP1-210ENST00000491064 SLC4A7Q9Y6M7 1214 aa16.32■□□□□ 0.2
CTDSP1-210ENST00000491064 B4GALT4O60513 344 aa16.31■□□□□ 0.2
CTDSP1-210ENST00000491064 PTGS1P23219 599 aa16.31■□□□□ 0.2
CTDSP1-210ENST00000491064 FSCN1Q16658 493 aaKnown RBP16.31■□□□□ 0.2
CTDSP1-210ENST00000491064 ZSCAN25Q6NSZ9 544 aa16.31■□□□□ 0.2
CTDSP1-210ENST00000491064 RPUSD2Q8IZ73 545 aaKnown RBP16.31■□□□□ 0.2
CTDSP1-210ENST00000491064 MKL1Q969V6 931 aa16.31■□□□□ 0.2
CTDSP1-210ENST00000491064 SEZ6LQ9BYH1 1024 aa16.31■□□□□ 0.2
CTDSP1-210ENST00000491064 TRPV6Q9H1D0 765 aa16.31■□□□□ 0.2
CTDSP1-210ENST00000491064 SCN5AQ14524 2016 aa16.3■□□□□ 0.2
CTDSP1-210ENST00000491064 GSG1L2A8MUP6 293 aa16.3■□□□□ 0.2
CTDSP1-210ENST00000491064 RAB11FIP3O75154 756 aa16.3■□□□□ 0.2
CTDSP1-210ENST00000491064 HMMRO75330 724 aa16.3■□□□□ 0.2
CTDSP1-210ENST00000491064 KCNQ1P51787 676 aa16.3■□□□□ 0.2
CTDSP1-210ENST00000491064 AAK1Q2M2I8 961 aa16.3■□□□□ 0.2
CTDSP1-210ENST00000491064 SIRT2Q8IXJ6 389 aa16.3■□□□□ 0.2
CTDSP1-210ENST00000491064 RPAP2Q8IXW5 612 aaPredicted RBP16.3■□□□□ 0.2
CTDSP1-210ENST00000491064 SCLYQ96I15 445 aa16.3■□□□□ 0.2
CTDSP1-210ENST00000491064 STRBPQ96SI9 672 aaKnown RBP16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms