RNA–Protein interactions for RNA: ENST00000490910.5

CRNKL1-204, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best)

Gene CRNKL1, Length 4,183 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-204ENST00000490910 NUCKS1Q9H1E3 243 aaKnown RBP12.46□□□□□ -0.41
CRNKL1-204ENST00000490910 TRIM10Q9UDY6 481 aa12.46□□□□□ -0.41
CRNKL1-204ENST00000490910 hCG_1642624A0A1W2PR95 340 aa12.46□□□□□ -0.41
CRNKL1-204ENST00000490910 TRAF5O00463 557 aa12.46□□□□□ -0.41
CRNKL1-204ENST00000490910 PSMD14O00487 310 aa12.46□□□□□ -0.41
CRNKL1-204ENST00000490910 MBD4O95243 580 aa12.46□□□□□ -0.41
CRNKL1-204ENST00000490910 COL3A1P02461 1466 aaPredicted RBP12.46□□□□□ -0.41
CRNKL1-204ENST00000490910 CASP1P29466 404 aa12.46□□□□□ -0.41
CRNKL1-204ENST00000490910 ZBTB16Q05516 673 aa12.46□□□□□ -0.41
CRNKL1-204ENST00000490910 BIRC3Q13489 604 aa12.46□□□□□ -0.41
CRNKL1-204ENST00000490910 VWA3BQ502W6 1294 aa12.46□□□□□ -0.41
CRNKL1-204ENST00000490910 ZNF658Q5TYW1 1059 aaPredicted RBP12.46□□□□□ -0.41
CRNKL1-204ENST00000490910 IRAK4Q9NWZ3 460 aa12.46□□□□□ -0.41
CRNKL1-204ENST00000490910 SEC63Q9UGP8 760 aaKnown RBP12.46□□□□□ -0.41
CRNKL1-204ENST00000490910 ESYT3A0FGR9 886 aa12.46□□□□□ -0.42
CRNKL1-204ENST00000490910 FAM107AO95990 144 aa12.46□□□□□ -0.42
CRNKL1-204ENST00000490910 GNAT2P19087 354 aa12.46□□□□□ -0.42
CRNKL1-204ENST00000490910 PTGDRQ13258 359 aa12.46□□□□□ -0.42
CRNKL1-204ENST00000490910 SIRT1Q96EB6 747 aa12.46□□□□□ -0.42
CRNKL1-204ENST00000490910 TSPY2A6NKD2 308 aa12.45□□□□□ -0.42
CRNKL1-204ENST00000490910 M0R2C6 588 aa12.45□□□□□ -0.42
CRNKL1-204ENST00000490910 GPTP24298 496 aa12.45□□□□□ -0.42
CRNKL1-204ENST00000490910 CTDSPL2Q05D32 466 aa12.45□□□□□ -0.42
CRNKL1-204ENST00000490910 PPP2R5BQ15173 497 aa12.45□□□□□ -0.42
CRNKL1-204ENST00000490910 WDR66Q8TBY9 1149 aa12.45□□□□□ -0.42
CRNKL1-204ENST00000490910 OSBPL9Q96SU4 736 aa12.45□□□□□ -0.42
CRNKL1-204ENST00000490910 VCPKMTQ9H867 229 aa12.45□□□□□ -0.42
CRNKL1-204ENST00000490910 PCDHA13Q9Y5I0 950 aa12.45□□□□□ -0.42
CRNKL1-204ENST00000490910 CCDC160A6NGH7 325 aa12.45□□□□□ -0.42
CRNKL1-204ENST00000490910 CETN3O15182 167 aa12.45□□□□□ -0.42
CRNKL1-204ENST00000490910 GYPCP04921 128 aa12.45□□□□□ -0.42
CRNKL1-204ENST00000490910 FDPSP14324 419 aaKnown RBP12.45□□□□□ -0.42
CRNKL1-204ENST00000490910 ASIC2Q16515 512 aa12.45□□□□□ -0.42
CRNKL1-204ENST00000490910 ZNF579Q8NAF0 562 aaKnown RBP12.45□□□□□ -0.42
CRNKL1-204ENST00000490910 OSBP2Q969R2 916 aa12.45□□□□□ -0.42
CRNKL1-204ENST00000490910 CD2APQ9Y5K6 639 aa12.45□□□□□ -0.42
CRNKL1-204ENST00000490910 PTGISQ16647 500 aa12.45□□□□□ -0.42
CRNKL1-204ENST00000490910 GNPTABQ3T906 1256 aa12.45□□□□□ -0.42
CRNKL1-204ENST00000490910 GRIPAP1Q4V328 841 aa12.45□□□□□ -0.42
CRNKL1-204ENST00000490910 MAGEB6Q8N7X4 407 aa12.45□□□□□ -0.42
CRNKL1-204ENST00000490910 MIEF2Q96C03 454 aa12.45□□□□□ -0.42
CRNKL1-204ENST00000490910 CNOT6LQ96LI5 555 aaKnown RBP12.45□□□□□ -0.42
CRNKL1-204ENST00000490910 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.45□□□□□ -0.42
CRNKL1-204ENST00000490910 PHF8Q9UPP1 1060 aa12.45□□□□□ -0.42
CRNKL1-204ENST00000490910 CRB1P82279 1406 aa12.45□□□□□ -0.42
CRNKL1-204ENST00000490910 ITIH6Q6UXX5 1313 aa12.45□□□□□ -0.42
CRNKL1-204ENST00000490910 FMNL1O95466 1100 aaPredicted RBP12.44□□□□□ -0.42
CRNKL1-204ENST00000490910 PAX7P23759 505 aa12.44□□□□□ -0.42
CRNKL1-204ENST00000490910 LRRC23Q53EV4 343 aaPredicted RBP12.44□□□□□ -0.42
CRNKL1-204ENST00000490910 ZNF654Q8IZM8 581 aa12.44□□□□□ -0.42
CRNKL1-204ENST00000490910 ARHGEF2Q92974 986 aaKnown RBP12.44□□□□□ -0.42
CRNKL1-204ENST00000490910 RNPC3Q96LT9 517 aaKnown RBP12.44□□□□□ -0.42
CRNKL1-204ENST00000490910 ZIM3Q96PE6 472 aa12.44□□□□□ -0.42
CRNKL1-204ENST00000490910 SNX12Q9UMY4 172 aa12.44□□□□□ -0.42
CRNKL1-204ENST00000490910 INO80Q9ULG1 1556 aaPredicted RBP12.44□□□□□ -0.42
CRNKL1-204ENST00000490910 LGALS16A8MUM7 142 aa12.44□□□□□ -0.42
CRNKL1-204ENST00000490910 EIF4A3P38919 411 aaKnown RBP12.44□□□□□ -0.42
CRNKL1-204ENST00000490910 KIF11P52732 1056 aa12.44□□□□□ -0.42
CRNKL1-204ENST00000490910 HDLBPQ00341 1268 aaKnown RBP12.44□□□□□ -0.42
CRNKL1-204ENST00000490910 NFRKBQ6P4R8 1299 aa12.44□□□□□ -0.42
CRNKL1-204ENST00000490910 TRAPPC11Q7Z392 1133 aa12.44□□□□□ -0.42
CRNKL1-204ENST00000490910 AATFQ9NY61 560 aaKnown RBP eCLIP12.44□□□□□ -0.42
CRNKL1-204ENST00000490910 RFX7Q2KHR2 1363 aa12.44□□□□□ -0.42
CRNKL1-204ENST00000490910 EFCAB6Q5THR3 1501 aa12.44□□□□□ -0.42
CRNKL1-204ENST00000490910 TFRCP02786 760 aaKnown RBP12.44□□□□□ -0.42
CRNKL1-204ENST00000490910 IFNAR1P17181 557 aa12.44□□□□□ -0.42
CRNKL1-204ENST00000490910 PDE6BP35913 854 aa12.44□□□□□ -0.42
CRNKL1-204ENST00000490910 POLE2P56282 527 aa12.44□□□□□ -0.42
CRNKL1-204ENST00000490910 PPP2R2AP63151 447 aa12.44□□□□□ -0.42
CRNKL1-204ENST00000490910 PPARAQ07869 468 aa12.44□□□□□ -0.42
CRNKL1-204ENST00000490910 AKNAD1Q5T1N1 836 aa12.44□□□□□ -0.42
CRNKL1-204ENST00000490910 ANKRD42Q8N9B4 389 aa12.44□□□□□ -0.42
CRNKL1-204ENST00000490910 FANCBQ8NB91 859 aa12.44□□□□□ -0.42
CRNKL1-204ENST00000490910 CYFIP2Q96F07 1278 aa12.44□□□□□ -0.42
CRNKL1-204ENST00000490910 FAM167BQ9BTA0 163 aa12.44□□□□□ -0.42
CRNKL1-204ENST00000490910 FLOT1O75955 427 aa12.44□□□□□ -0.42
CRNKL1-204ENST00000490910 RASSF2P50749 326 aa12.44□□□□□ -0.42
CRNKL1-204ENST00000490910 PTPN12Q05209 780 aaKnown RBP12.44□□□□□ -0.42
CRNKL1-204ENST00000490910 DHX9Q08211 1270 aaKnown RBP12.44□□□□□ -0.42
CRNKL1-204ENST00000490910 ZNF790Q6PG37 636 aa12.44□□□□□ -0.42
CRNKL1-204ENST00000490910 SV2BQ7L1I2 683 aa12.44□□□□□ -0.42
CRNKL1-204ENST00000490910 IFNL2Q8IZJ0 200 aa12.44□□□□□ -0.42
CRNKL1-204ENST00000490910 NFATC2IPQ8NCF5 419 aa12.44□□□□□ -0.42
CRNKL1-204ENST00000490910 MYCBPAPQ8TBZ2 947 aa12.44□□□□□ -0.42
CRNKL1-204ENST00000490910 ARL8AQ96BM9 186 aa12.44□□□□□ -0.42
CRNKL1-204ENST00000490910 HOOK2Q96ED9 719 aa12.44□□□□□ -0.42
CRNKL1-204ENST00000490910 ELAC2Q9BQ52 826 aaKnown RBP12.44□□□□□ -0.42
CRNKL1-204ENST00000490910 PLVAPQ9BX97 442 aa12.44□□□□□ -0.42
CRNKL1-204ENST00000490910 IQSEC3Q9UPP2 1182 aaPredicted RBP12.44□□□□□ -0.42
CRNKL1-204ENST00000490910 PLEKHG3A1L390 1219 aa12.43□□□□□ -0.42
CRNKL1-204ENST00000490910 FTCDO95954 541 aa12.43□□□□□ -0.42
CRNKL1-204ENST00000490910 RASIP1Q5U651 963 aa12.43□□□□□ -0.42
CRNKL1-204ENST00000490910 EHD4Q9H223 541 aa12.43□□□□□ -0.42
CRNKL1-204ENST00000490910 MKNK2Q9HBH9 465 aa12.43□□□□□ -0.42
CRNKL1-204ENST00000490910 CFAP73A6NFT4 308 aa12.43□□□□□ -0.42
CRNKL1-204ENST00000490910 SH2B2O14492 632 aaPredicted RBP12.43□□□□□ -0.42
CRNKL1-204ENST00000490910 FSBPO95073 299 aa12.43□□□□□ -0.42
CRNKL1-204ENST00000490910 STX2P32856 288 aa12.43□□□□□ -0.42
CRNKL1-204ENST00000490910 TBX2Q13207 712 aaPredicted RBP12.43□□□□□ -0.42
CRNKL1-204ENST00000490910 SEPT2Q15019 361 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms