RNA–Protein interactions for RNA: ENST00000490903.5

CKAP2-207, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CKAP2, Length 3,395 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-207ENST00000490903 COPB2P35606 906 aa6.38□□□□□ -1.39
CKAP2-207ENST00000490903 GNASQ5JWF2 1037 aa6.38□□□□□ -1.39
CKAP2-207ENST00000490903 ZNF589Q86UQ0 364 aaPredicted RBP6.38□□□□□ -1.39
CKAP2-207ENST00000490903 MKL1Q969V6 931 aa6.38□□□□□ -1.39
CKAP2-207ENST00000490903 PURBQ96QR8 312 aaKnown RBP6.38□□□□□ -1.39
CKAP2-207ENST00000490903 SPC25Q9HBM1 224 aa6.38□□□□□ -1.39
CKAP2-207ENST00000490903 SLC38A10Q9HBR0 1119 aa6.38□□□□□ -1.39
CKAP2-207ENST00000490903 DIAPH3Q9NSV4 1193 aa6.38□□□□□ -1.39
CKAP2-207ENST00000490903 CDKN2AIPQ9NXV6 580 aaPredicted RBP6.38□□□□□ -1.39
CKAP2-207ENST00000490903 DDX60LQ5H9U9 1706 aaKnown RBP6.38□□□□□ -1.39
CKAP2-207ENST00000490903 IGKV6D-41A0A0C4DH26 115 aa6.38□□□□□ -1.39
CKAP2-207ENST00000490903 DHX16O60231 1041 aaKnown RBP6.38□□□□□ -1.39
CKAP2-207ENST00000490903 SNAI1O95863 264 aaPredicted RBP6.38□□□□□ -1.39
CKAP2-207ENST00000490903 PTGS1P23219 599 aa6.38□□□□□ -1.39
CKAP2-207ENST00000490903 ACVR2BQ13705 512 aa6.38□□□□□ -1.39
CKAP2-207ENST00000490903 KCNA10Q16322 511 aa6.38□□□□□ -1.39
CKAP2-207ENST00000490903 STAG1Q8WVM7 1258 aa6.38□□□□□ -1.39
CKAP2-207ENST00000490903 STARD7Q9NQZ5 370 aa6.38□□□□□ -1.39
CKAP2-207ENST00000490903 IL17RBQ9NRM6 502 aa6.38□□□□□ -1.39
CKAP2-207ENST00000490903 HELLSQ9NRZ9 838 aa6.38□□□□□ -1.39
CKAP2-207ENST00000490903 TMEM39AQ9NV64 488 aa6.38□□□□□ -1.39
CKAP2-207ENST00000490903 CCPG1Q9ULG6 757 aa6.38□□□□□ -1.39
CKAP2-207ENST00000490903 PTPDC1A2A3K4 754 aa6.38□□□□□ -1.39
CKAP2-207ENST00000490903 ZNF865P0CJ78 1059 aaPredicted RBP6.38□□□□□ -1.39
CKAP2-207ENST00000490903 HSPD1P10809 573 aaKnown RBP6.38□□□□□ -1.39
CKAP2-207ENST00000490903 BEX3Q00994 111 aa6.38□□□□□ -1.39
CKAP2-207ENST00000490903 MKRN4PQ13434 485 aaPredicted RBP6.38□□□□□ -1.39
CKAP2-207ENST00000490903 CCDC144BQ3MJ40 725 aa6.38□□□□□ -1.39
CKAP2-207ENST00000490903 RCSD1Q6JBY9 416 aa6.38□□□□□ -1.39
CKAP2-207ENST00000490903 MFSD6Q6ZSS7 791 aa6.38□□□□□ -1.39
CKAP2-207ENST00000490903 CCDC144CPQ8IYA2 1237 aa6.38□□□□□ -1.39
CKAP2-207ENST00000490903 ACAD9Q9H845 621 aa6.38□□□□□ -1.39
CKAP2-207ENST00000490903 VAT1LQ9HCJ6 419 aa6.38□□□□□ -1.39
CKAP2-207ENST00000490903 FBXO40Q9UH90 709 aa6.38□□□□□ -1.39
CKAP2-207ENST00000490903 PRR12Q9ULL5 1215 aa6.38□□□□□ -1.39
CKAP2-207ENST00000490903 TACC3Q9Y6A5 838 aa6.38□□□□□ -1.39
CKAP2-207ENST00000490903 DYNC1LI2O43237 492 aaPredicted RBP6.37□□□□□ -1.39
CKAP2-207ENST00000490903 GOLGA8HP0CJ92 632 aa6.37□□□□□ -1.39
CKAP2-207ENST00000490903 BMP8BP34820 402 aa6.37□□□□□ -1.39
CKAP2-207ENST00000490903 HDAC1Q13547 482 aaPredicted RBP6.37□□□□□ -1.39
CKAP2-207ENST00000490903 SHHQ15465 462 aa6.37□□□□□ -1.39
CKAP2-207ENST00000490903 ARMCX2Q7L311 632 aa6.37□□□□□ -1.39
CKAP2-207ENST00000490903 FAM160B2Q86V87 743 aa6.37□□□□□ -1.39
CKAP2-207ENST00000490903 CHD1LQ86WJ1 897 aa6.37□□□□□ -1.39
CKAP2-207ENST00000490903 CPVLQ9H3G5 476 aa6.37□□□□□ -1.39
CKAP2-207ENST00000490903 ZNFX1Q9P2E3 1918 aaKnown RBP6.37□□□□□ -1.39
CKAP2-207ENST00000490903 A0A1W2PPC1 479 aa6.37□□□□□ -1.39
CKAP2-207ENST00000490903 A0A1W2PQ45 241 aaPredicted RBP6.37□□□□□ -1.39
CKAP2-207ENST00000490903 A0A1W2PQY0 241 aa6.37□□□□□ -1.39
CKAP2-207ENST00000490903 MYADML2A6NDP7 307 aa6.37□□□□□ -1.39
CKAP2-207ENST00000490903 ZNF213O14771 459 aa6.37□□□□□ -1.39
CKAP2-207ENST00000490903 FOXP2O15409 715 aa6.37□□□□□ -1.39
CKAP2-207ENST00000490903 CALML3P27482 149 aa6.37□□□□□ -1.39
CKAP2-207ENST00000490903 MUM1L1Q5H9M0 696 aa6.37□□□□□ -1.39
CKAP2-207ENST00000490903 C9orf50Q5SZB4 431 aa6.37□□□□□ -1.39
CKAP2-207ENST00000490903 GMCL1P1Q8NEA9 526 aa6.37□□□□□ -1.39
CKAP2-207ENST00000490903 CHST13Q8NET6 341 aa6.37□□□□□ -1.39
CKAP2-207ENST00000490903 GLT1D1Q96MS3 346 aa6.37□□□□□ -1.39
CKAP2-207ENST00000490903 TMEM47Q9BQJ4 181 aa6.37□□□□□ -1.39
CKAP2-207ENST00000490903 PPP1R12CQ9BZL4 782 aa6.37□□□□□ -1.39
CKAP2-207ENST00000490903 UBA5Q9GZZ9 404 aa6.37□□□□□ -1.39
CKAP2-207ENST00000490903 A1CFQ9NQ94 594 aaKnown RBP6.37□□□□□ -1.39
CKAP2-207ENST00000490903 DIS3Q9Y2L1 958 aaKnown RBP6.37□□□□□ -1.39
CKAP2-207ENST00000490903 MYH7P12883 1935 aa6.37□□□□□ -1.39
CKAP2-207ENST00000490903 CUL9Q8IWT3 2517 aa6.37□□□□□ -1.39
CKAP2-207ENST00000490903 TRIM43BA6NCK2 446 aa6.37□□□□□ -1.39
CKAP2-207ENST00000490903 DCDC2CA8MYV0 355 aa6.37□□□□□ -1.39
CKAP2-207ENST00000490903 SDSP20132 328 aa6.37□□□□□ -1.39
CKAP2-207ENST00000490903 ACLYP53396 1101 aa6.37□□□□□ -1.39
CKAP2-207ENST00000490903 USH1GQ495M9 461 aa6.37□□□□□ -1.39
CKAP2-207ENST00000490903 KIAA1211Q6ZU35 1233 aa6.37□□□□□ -1.39
CKAP2-207ENST00000490903 NUP133Q8WUM0 1156 aa6.37□□□□□ -1.39
CKAP2-207ENST00000490903 TRIM43Q96BQ3 446 aaPredicted RBP6.37□□□□□ -1.39
CKAP2-207ENST00000490903 ABHD16BQ9H3Z7 469 aa6.37□□□□□ -1.39
CKAP2-207ENST00000490903 DDX52Q9Y2R4 599 aaKnown RBP eCLIP6.37□□□□□ -1.39
CKAP2-207ENST00000490903 COL6A3P12111 3177 aa6.36□□□□□ -1.39
CKAP2-207ENST00000490903 C11orf97A0A1B0GVM6 126 aaPredicted RBP6.36□□□□□ -1.39
CKAP2-207ENST00000490903 ASGR1P07306 291 aa6.36□□□□□ -1.39
CKAP2-207ENST00000490903 TNFAIP2Q03169 654 aa6.36□□□□□ -1.39
CKAP2-207ENST00000490903 BAATQ14032 418 aaPredicted RBP6.36□□□□□ -1.39
CKAP2-207ENST00000490903 PPP4R3BQ5MIZ7 849 aa6.36□□□□□ -1.39
CKAP2-207ENST00000490903 PLEKHM2Q8IWE5 1019 aa6.36□□□□□ -1.39
CKAP2-207ENST00000490903 PPP1R13LQ8WUF5 828 aa6.36□□□□□ -1.39
CKAP2-207ENST00000490903 AP5M1Q9H0R1 490 aa6.36□□□□□ -1.39
CKAP2-207ENST00000490903 PDLIM7Q9NR12 457 aa6.36□□□□□ -1.39
CKAP2-207ENST00000490903 PDGFCQ9NRA1 345 aa6.36□□□□□ -1.39
CKAP2-207ENST00000490903 CCDC171Q6TFL3 1326 aa6.36□□□□□ -1.39
CKAP2-207ENST00000490903 ROBO3Q96MS0 1386 aa6.36□□□□□ -1.39
CKAP2-207ENST00000490903 SOWAHBA6NEL2 793 aa6.36□□□□□ -1.39
CKAP2-207ENST00000490903 CLTBP09497 229 aa6.36□□□□□ -1.39
CKAP2-207ENST00000490903 TOP1P11387 765 aaKnown RBP6.36□□□□□ -1.39
CKAP2-207ENST00000490903 AKNAD1Q5T1N1 836 aa6.36□□□□□ -1.39
CKAP2-207ENST00000490903 SYDE2Q5VT97 1194 aa6.36□□□□□ -1.39
CKAP2-207ENST00000490903 CXCL17Q6UXB2 119 aa6.36□□□□□ -1.39
CKAP2-207ENST00000490903 FBXO16Q8IX29 292 aaPredicted RBP6.36□□□□□ -1.39
CKAP2-207ENST00000490903 GMCL1Q96IK5 515 aa6.36□□□□□ -1.39
CKAP2-207ENST00000490903 ALPK3Q96L96 1907 aa6.36□□□□□ -1.39
CKAP2-207ENST00000490903 SALL3Q9BXA9 1300 aa6.36□□□□□ -1.39
CKAP2-207ENST00000490903 SYNRGQ9UMZ2 1314 aa6.36□□□□□ -1.39
CKAP2-207ENST00000490903 B4E1Z4 1266 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms