RNA–Protein interactions for RNA: ENST00000490889.2

SRGAP3-209, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 4

Gene SRGAP3, Length 622 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-209ENST00000490889 KCNA10Q16322 511 aa19.75■□□□□ 0.75
SRGAP3-209ENST00000490889 CHST13Q8NET6 341 aa19.75■□□□□ 0.75
SRGAP3-209ENST00000490889 KATNBL1Q9H079 304 aa19.75■□□□□ 0.75
SRGAP3-209ENST00000490889 HOMER2Q9NSB8 354 aa19.75■□□□□ 0.75
SRGAP3-209ENST00000490889 NMT2O60551 498 aa19.74■□□□□ 0.75
SRGAP3-209ENST00000490889 DUSP11O75319 330 aaKnown RBP19.74■□□□□ 0.75
SRGAP3-209ENST00000490889 CNTN2Q02246 1040 aa19.74■□□□□ 0.75
SRGAP3-209ENST00000490889 CTDSPL2Q05D32 466 aa19.74■□□□□ 0.75
SRGAP3-209ENST00000490889 FAAP100Q0VG06 881 aa19.74■□□□□ 0.75
SRGAP3-209ENST00000490889 ZNF697Q5TEC3 545 aa19.74■□□□□ 0.75
SRGAP3-209ENST00000490889 VPS53Q5VIR6 699 aa19.74■□□□□ 0.75
SRGAP3-209ENST00000490889 ARMCX2Q7L311 632 aa19.74■□□□□ 0.75
SRGAP3-209ENST00000490889 ANKRD33Q7Z3H0 272 aa19.74■□□□□ 0.75
SRGAP3-209ENST00000490889 STARD7Q9NQZ5 370 aa19.74■□□□□ 0.75
SRGAP3-209ENST00000490889 IL17RBQ9NRM6 502 aa19.74■□□□□ 0.75
SRGAP3-209ENST00000490889 FBXO40Q9UH90 709 aa19.74■□□□□ 0.75
SRGAP3-209ENST00000490889 MOXD2PA6NHM9 499 aa19.73■□□□□ 0.75
SRGAP3-209ENST00000490889 SLC3A2P08195 630 aaKnown RBP19.73■□□□□ 0.75
SRGAP3-209ENST00000490889 MCCP23508 829 aa19.73■□□□□ 0.75
SRGAP3-209ENST00000490889 STAT2P52630 851 aa19.73■□□□□ 0.75
SRGAP3-209ENST00000490889 CCDC144BQ3MJ40 725 aa19.73■□□□□ 0.75
SRGAP3-209ENST00000490889 CCDC144CPQ8IYA2 1237 aa19.73■□□□□ 0.75
SRGAP3-209ENST00000490889 FAM133AQ8N9E0 248 aa19.73■□□□□ 0.75
SRGAP3-209ENST00000490889 GMCL1Q96IK5 515 aa19.73■□□□□ 0.75
SRGAP3-209ENST00000490889 AGBL1Q96MI9 1066 aa19.73■□□□□ 0.75
SRGAP3-209ENST00000490889 ABHD16BQ9H3Z7 469 aa19.73■□□□□ 0.75
SRGAP3-209ENST00000490889 TMEM39AQ9NV64 488 aa19.73■□□□□ 0.75
SRGAP3-209ENST00000490889 ISY1Q9ULR0 285 aaKnown RBP19.73■□□□□ 0.75
SRGAP3-209ENST00000490889 LRRC37A2A6NM11 1700 aa19.72■□□□□ 0.75
SRGAP3-209ENST00000490889 C6orf222P0C671 652 aaPredicted RBP19.72■□□□□ 0.75
SRGAP3-209ENST00000490889 RAG1P15918 1043 aa19.72■□□□□ 0.75
SRGAP3-209ENST00000490889 CST5P28325 142 aaPredicted RBP19.72■□□□□ 0.75
SRGAP3-209ENST00000490889 SLC1A4P43007 532 aa19.72■□□□□ 0.75
SRGAP3-209ENST00000490889 RRP1P56182 461 aaKnown RBP19.72■□□□□ 0.75
SRGAP3-209ENST00000490889 SNAP25P60880 206 aa19.72■□□□□ 0.75
SRGAP3-209ENST00000490889 KCTD1Q719H9 257 aa19.72■□□□□ 0.75
SRGAP3-209ENST00000490889 STAG1Q8WVM7 1258 aa19.72■□□□□ 0.75
SRGAP3-209ENST00000490889 TOX2Q96NM4 488 aa19.72■□□□□ 0.75
SRGAP3-209ENST00000490889 UPF3AQ9H1J1 476 aaKnown RBP19.72■□□□□ 0.75
SRGAP3-209ENST00000490889 TTYH1Q9H313 450 aaPredicted RBP19.72■□□□□ 0.75
SRGAP3-209ENST00000490889 ACAD9Q9H845 621 aa19.72■□□□□ 0.75
SRGAP3-209ENST00000490889 A1CFQ9NQ94 594 aaKnown RBP19.72■□□□□ 0.75
SRGAP3-209ENST00000490889 RNF146Q9NTX7 359 aa19.72■□□□□ 0.75
SRGAP3-209ENST00000490889 STX8Q9UNK0 236 aa19.72■□□□□ 0.75
SRGAP3-209ENST00000490889 DDX49Q9Y6V7 483 aaKnown RBP19.72■□□□□ 0.75
SRGAP3-209ENST00000490889 ASTN1O14525 1302 aa19.72■□□□□ 0.75
SRGAP3-209ENST00000490889 SOWAHBA6NEL2 793 aa19.71■□□□□ 0.75
SRGAP3-209ENST00000490889 CTAGE5O15320 804 aa19.71■□□□□ 0.75
SRGAP3-209ENST00000490889 ASGR1P07306 291 aa19.71■□□□□ 0.75
SRGAP3-209ENST00000490889 FDX1P10109 184 aa19.71■□□□□ 0.75
SRGAP3-209ENST00000490889 GJA9P57773 515 aa19.71■□□□□ 0.75
SRGAP3-209ENST00000490889 SMAD3P84022 425 aaKnown RBP19.71■□□□□ 0.75
SRGAP3-209ENST00000490889 FAM160B2Q86V87 743 aa19.71■□□□□ 0.75
SRGAP3-209ENST00000490889 NUP133Q8WUM0 1156 aa19.71■□□□□ 0.75
SRGAP3-209ENST00000490889 CRBNQ96SW2 442 aa19.71■□□□□ 0.75
SRGAP3-209ENST00000490889 SEMA6BQ9H3T3 888 aa19.71■□□□□ 0.75
SRGAP3-209ENST00000490889 PRUNE2Q8WUY3 3088 aa19.7■□□□□ 0.74
SRGAP3-209ENST00000490889 VCANP13611 3396 aa19.7■□□□□ 0.74
SRGAP3-209ENST00000490889 C11orf97A0A1B0GVM6 126 aaPredicted RBP19.7■□□□□ 0.74
SRGAP3-209ENST00000490889 TSPY2A6NKD2 308 aa19.7■□□□□ 0.74
SRGAP3-209ENST00000490889 PTGS1P23219 599 aa19.7■□□□□ 0.74
SRGAP3-209ENST00000490889 IKQ13123 557 aaPredicted RBP19.7■□□□□ 0.74
SRGAP3-209ENST00000490889 ANKRD45Q5TZF3 282 aa19.7■□□□□ 0.74
SRGAP3-209ENST00000490889 CHURC1Q8WUH1 139 aa19.7■□□□□ 0.74
SRGAP3-209ENST00000490889 CDX2Q99626 313 aaPredicted RBP19.7■□□□□ 0.74
SRGAP3-209ENST00000490889 ANAPC4Q9UJX5 808 aa19.7■□□□□ 0.74
SRGAP3-209ENST00000490889 TBX21Q9UL17 535 aa19.7■□□□□ 0.74
SRGAP3-209ENST00000490889 PRR12Q9ULL5 1215 aa19.7■□□□□ 0.74
SRGAP3-209ENST00000490889 LCTP09848 1927 aa19.7■□□□□ 0.74
SRGAP3-209ENST00000490889 DCDC2CA8MYV0 355 aa19.69■□□□□ 0.74
SRGAP3-209ENST00000490889 PLA2G6O60733 806 aa19.69■□□□□ 0.74
SRGAP3-209ENST00000490889 NOVP48745 357 aa19.69■□□□□ 0.74
SRGAP3-209ENST00000490889 CDK7P50613 346 aa19.69■□□□□ 0.74
SRGAP3-209ENST00000490889 FPGSQ05932 587 aa19.69■□□□□ 0.74
SRGAP3-209ENST00000490889 MUM1L1Q5H9M0 696 aa19.69■□□□□ 0.74
SRGAP3-209ENST00000490889 CCDC174Q6PII3 467 aa19.69■□□□□ 0.74
SRGAP3-209ENST00000490889 RNPC3Q96LT9 517 aaKnown RBP19.69■□□□□ 0.74
SRGAP3-209ENST00000490889 GLT1D1Q96MS3 346 aa19.69■□□□□ 0.74
SRGAP3-209ENST00000490889 ELP1O95163 1332 aa19.69■□□□□ 0.74
SRGAP3-209ENST00000490889 ALAS1P13196 640 aa19.68■□□□□ 0.74
SRGAP3-209ENST00000490889 PDE1AP54750 535 aa19.68■□□□□ 0.74
SRGAP3-209ENST00000490889 BEX3Q00994 111 aa19.68■□□□□ 0.74
SRGAP3-209ENST00000490889 RCSD1Q6JBY9 416 aa19.68■□□□□ 0.74
SRGAP3-209ENST00000490889 PCSK9Q8NBP7 692 aaKnown RBP19.68■□□□□ 0.74
SRGAP3-209ENST00000490889 EVI5LQ96CN4 794 aa19.68■□□□□ 0.74
SRGAP3-209ENST00000490889 FAM227BQ96M60 508 aa19.68■□□□□ 0.74
SRGAP3-209ENST00000490889 TRERF1Q96PN7 1200 aa19.68■□□□□ 0.74
SRGAP3-209ENST00000490889 MTMR7Q9Y216 660 aa19.68■□□□□ 0.74
SRGAP3-209ENST00000490889 A0A0D9SFI3 127 aa19.67■□□□□ 0.74
SRGAP3-209ENST00000490889 RANBP6O60518 1105 aaKnown RBP19.67■□□□□ 0.74
SRGAP3-209ENST00000490889 TIMP1P01033 207 aa19.67■□□□□ 0.74
SRGAP3-209ENST00000490889 FGRP09769 529 aa19.67■□□□□ 0.74
SRGAP3-209ENST00000490889 GNASQ5JWF2 1037 aa19.67■□□□□ 0.74
SRGAP3-209ENST00000490889 PHF6Q8IWS0 365 aaKnown RBP eCLIP19.67■□□□□ 0.74
SRGAP3-209ENST00000490889 MYLIPQ8WY64 445 aa19.67■□□□□ 0.74
SRGAP3-209ENST00000490889 PURBQ96QR8 312 aaKnown RBP19.67■□□□□ 0.74
SRGAP3-209ENST00000490889 SPC25Q9HBM1 224 aa19.67■□□□□ 0.74
SRGAP3-209ENST00000490889 ARVCFO00192 962 aa19.66■□□□□ 0.74
SRGAP3-209ENST00000490889 ORC4O43929 436 aa19.66■□□□□ 0.74
SRGAP3-209ENST00000490889 NKX3-2P78367 333 aa19.66■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms