RNA–Protein interactions for RNA: ENST00000490839.1

AGAP3-222, Transcript of ArfGAP with GTPase domain, ankyrin repeat and PH domain 3, human

TSL 4

Gene AGAP3, Length 592 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
AGAP3-222	ENST00000490839	FGD4	Q96M96	766 aa		18.25	■□□□□ 0.51
AGAP3-222	ENST00000490839	STRBP	Q96SI9	672 aa	Known RBP	18.25	■□□□□ 0.51
AGAP3-222	ENST00000490839	SLC38A10	Q9HBR0	1119 aa		18.25	■□□□□ 0.51
AGAP3-222	ENST00000490839	FEM1B	Q9UK73	627 aa		18.25	■□□□□ 0.51
AGAP3-222	ENST00000490839	SYNPO2	Q9UMS6	1093 aa		18.25	■□□□□ 0.51
AGAP3-222	ENST00000490839	CHD9	Q3L8U1	2897 aa		18.24	■□□□□ 0.51
AGAP3-222	ENST00000490839	IGKV6D-41	A0A0C4DH26	115 aa		18.24	■□□□□ 0.51
AGAP3-222	ENST00000490839	SLC4A3	P48751	1232 aa		18.24	■□□□□ 0.51
AGAP3-222	ENST00000490839	NKX3-2	P78367	333 aa		18.24	■□□□□ 0.51
AGAP3-222	ENST00000490839	IRX5	P78411	483 aa	Predicted RBP	18.24	■□□□□ 0.51
AGAP3-222	ENST00000490839	GNAS	Q5JWF2	1037 aa		18.24	■□□□□ 0.51
AGAP3-222	ENST00000490839	AKNAD1	Q5T1N1	836 aa		18.24	■□□□□ 0.51
AGAP3-222	ENST00000490839	KIFC2	Q96AC6	838 aa		18.24	■□□□□ 0.51
AGAP3-222	ENST00000490839	RAVER2	Q9HCJ3	691 aa	Known RBP	18.24	■□□□□ 0.51
AGAP3-222	ENST00000490839	GSG1L2	A8MUP6	293 aa		18.23	■□□□□ 0.51
AGAP3-222	ENST00000490839	PBX2	P40425	430 aa		18.23	■□□□□ 0.51
AGAP3-222	ENST00000490839	ZNF365	Q70YC5	407 aa		18.23	■□□□□ 0.51
AGAP3-222	ENST00000490839	ATXN2L	Q8WWM7	1075 aa	Known RBP	18.23	■□□□□ 0.51
AGAP3-222	ENST00000490839	MKL1	Q969V6	931 aa		18.23	■□□□□ 0.51
AGAP3-222	ENST00000490839	PPP1R12C	Q9BZL4	782 aa		18.23	■□□□□ 0.51
AGAP3-222	ENST00000490839	ZNF287	Q9HBT7	754 aa		18.23	■□□□□ 0.51
AGAP3-222	ENST00000490839	CLIP2	Q9UDT6	1046 aa		18.23	■□□□□ 0.51
AGAP3-222	ENST00000490839	GRXCR1	A8MXD5	290 aa		18.22	■□□□□ 0.51
AGAP3-222	ENST00000490839	MINDY4B	A8MYZ0	360 aa		18.22	■□□□□ 0.51
AGAP3-222	ENST00000490839	RAB30	Q15771	203 aa		18.22	■□□□□ 0.51
AGAP3-222	ENST00000490839	CCDC144CP	Q8IYA2	1237 aa		18.22	■□□□□ 0.51
AGAP3-222	ENST00000490839	STK11IP	Q8N1F8	1099 aa		18.22	■□□□□ 0.51
AGAP3-222	ENST00000490839	GMCL1P1	Q8NEA9	526 aa		18.22	■□□□□ 0.51
AGAP3-222	ENST00000490839	KATNBL1	Q9H079	304 aa		18.22	■□□□□ 0.51
AGAP3-222	ENST00000490839	MTIF3	Q9H2K0	278 aa	Known RBP	18.22	■□□□□ 0.51
AGAP3-222	ENST00000490839	CHMP4B	Q9H444	224 aa	Known RBP	18.22	■□□□□ 0.51
AGAP3-222	ENST00000490839	PRDM12	Q9H4Q4	367 aa		18.22	■□□□□ 0.51
AGAP3-222	ENST00000490839	IL23A	Q9NPF7	189 aa		18.22	■□□□□ 0.51
AGAP3-222	ENST00000490839	THEG	Q9P2T0	379 aa		18.22	■□□□□ 0.51
AGAP3-222	ENST00000490839	MSRA	Q9UJ68	235 aa		18.22	■□□□□ 0.51
AGAP3-222	ENST00000490839	COG6	Q9Y2V7	657 aa		18.22	■□□□□ 0.51
AGAP3-222	ENST00000490839	BDP1	A6H8Y1	2624 aa		18.22	■□□□□ 0.51
AGAP3-222	ENST00000490839	CTAGE5	O15320	804 aa		18.21	■□□□□ 0.51
AGAP3-222	ENST00000490839	CD4	P01730	458 aa		18.21	■□□□□ 0.51
AGAP3-222	ENST00000490839	FDX1	P10109	184 aa		18.21	■□□□□ 0.51
AGAP3-222	ENST00000490839	ACR	P10323	421 aa		18.21	■□□□□ 0.51
AGAP3-222	ENST00000490839	HERVK_113	Q902F9	699 aa		18.21	■□□□□ 0.51
AGAP3-222	ENST00000490839	APPBP2	Q92624	585 aa		18.21	■□□□□ 0.51
AGAP3-222	ENST00000490839	LRRCC1	Q9C099	1032 aa		18.21	■□□□□ 0.51
AGAP3-222	ENST00000490839	ACAD9	Q9H845	621 aa		18.21	■□□□□ 0.51
AGAP3-222	ENST00000490839	PLIN4	Q96Q06	1357 aa		18.2	■□□□□ 0.5
AGAP3-222	ENST00000490839	CABYR	O75952	493 aa		18.2	■□□□□ 0.5
AGAP3-222	ENST00000490839	TTLL1	O95922	423 aa		18.2	■□□□□ 0.5
AGAP3-222	ENST00000490839	CYP2C18	P33260	490 aa		18.2	■□□□□ 0.5
AGAP3-222	ENST00000490839	TDO2	P48775	406 aa		18.2	■□□□□ 0.5
AGAP3-222	ENST00000490839	ZNF444	Q8N0Y2	327 aa	Predicted RBP	18.2	■□□□□ 0.5
AGAP3-222	ENST00000490839	FAM133A	Q8N9E0	248 aa		18.2	■□□□□ 0.5
AGAP3-222	ENST00000490839	KBTBD3	Q8NAB2	608 aa		18.2	■□□□□ 0.5
AGAP3-222	ENST00000490839	PPM1E	Q8WY54	764 aa		18.2	■□□□□ 0.5
AGAP3-222	ENST00000490839	CEP95	Q96GE4	821 aa		18.2	■□□□□ 0.5
AGAP3-222	ENST00000490839	EPB41L4A	Q9HCS5	686 aa	Predicted RBP	18.2	■□□□□ 0.5
AGAP3-222	ENST00000490839	ECHDC1	Q9NTX5	307 aa		18.2	■□□□□ 0.5
AGAP3-222	ENST00000490839	MTMR4	Q9NYA4	1195 aa		18.2	■□□□□ 0.5
AGAP3-222	ENST00000490839	LRRC37A2	A6NM11	1700 aa		18.2	■□□□□ 0.5
AGAP3-222	ENST00000490839	BMP3	P12645	472 aa		18.19	■□□□□ 0.5
AGAP3-222	ENST00000490839	GNAT2	P19087	354 aa		18.19	■□□□□ 0.5
AGAP3-222	ENST00000490839	CNTN2	Q02246	1040 aa		18.19	■□□□□ 0.5
AGAP3-222	ENST00000490839	TNFAIP2	Q03169	654 aa		18.19	■□□□□ 0.5
AGAP3-222	ENST00000490839	LRRC47	Q8N1G4	583 aa	Known RBP	18.19	■□□□□ 0.5
AGAP3-222	ENST00000490839	SLC43A3	Q8NBI5	491 aa		18.19	■□□□□ 0.5
AGAP3-222	ENST00000490839	GBF1	Q92538	1859 aa		18.19	■□□□□ 0.5
AGAP3-222	ENST00000490839	OSBP2	Q969R2	916 aa		18.19	■□□□□ 0.5
AGAP3-222	ENST00000490839	ASB2	Q96Q27	587 aa		18.19	■□□□□ 0.5
AGAP3-222	ENST00000490839	SEZ6L	Q9BYH1	1024 aa		18.19	■□□□□ 0.5
AGAP3-222	ENST00000490839	HIPK3	Q9H422	1215 aa		18.19	■□□□□ 0.5
AGAP3-222	ENST00000490839	HOMER2	Q9NSB8	354 aa		18.19	■□□□□ 0.5
AGAP3-222	ENST00000490839	ASTN1	O14525	1302 aa		18.19	■□□□□ 0.5
AGAP3-222	ENST00000490839	ASB14	A6NK59	587 aa		18.18	■□□□□ 0.5
AGAP3-222	ENST00000490839	GPAA1	O43292	621 aa		18.18	■□□□□ 0.5
AGAP3-222	ENST00000490839	PRDM1	O75626	825 aa		18.18	■□□□□ 0.5
AGAP3-222	ENST00000490839	ZFY	P08048	801 aa	Predicted RBP	18.18	■□□□□ 0.5
AGAP3-222	ENST00000490839	BEX3	Q00994	111 aa		18.18	■□□□□ 0.5
AGAP3-222	ENST00000490839	ADGRE1	Q14246	886 aa		18.18	■□□□□ 0.5
AGAP3-222	ENST00000490839	SLFN13	Q68D06	897 aa		18.18	■□□□□ 0.5
AGAP3-222	ENST00000490839	CXCL17	Q6UXB2	119 aa		18.18	■□□□□ 0.5
AGAP3-222	ENST00000490839	NOL8	Q76FK4	1167 aa	Known RBP	18.18	■□□□□ 0.5
AGAP3-222	ENST00000490839	TLK2	Q86UE8	772 aa		18.18	■□□□□ 0.5
AGAP3-222	ENST00000490839	A1CF	Q9NQ94	594 aa	Known RBP	18.18	■□□□□ 0.5
AGAP3-222	ENST00000490839	CXXC1	Q9P0U4	656 aa	Predicted RBP	18.18	■□□□□ 0.5
AGAP3-222	ENST00000490839	C11orf97	A0A1B0GVM6	126 aa	Predicted RBP	18.17	■□□□□ 0.5
AGAP3-222	ENST00000490839	RNF113A	O15541	343 aa	Known RBP	18.17	■□□□□ 0.5
AGAP3-222	ENST00000490839	FGB	P02675	491 aa		18.17	■□□□□ 0.5
AGAP3-222	ENST00000490839	COL9A1	P20849	921 aa		18.17	■□□□□ 0.5
AGAP3-222	ENST00000490839	STAT2	P52630	851 aa		18.17	■□□□□ 0.5
AGAP3-222	ENST00000490839	MRPS5	P82675	430 aa	Known RBP	18.17	■□□□□ 0.5
AGAP3-222	ENST00000490839	FSCN1	Q16658	493 aa	Known RBP	18.17	■□□□□ 0.5
AGAP3-222	ENST00000490839	TKFC	Q3LXA3	575 aa		18.17	■□□□□ 0.5
AGAP3-222	ENST00000490839	SLC28A3	Q9HAS3	691 aa		18.17	■□□□□ 0.5
AGAP3-222	ENST00000490839	RNF146	Q9NTX7	359 aa		18.17	■□□□□ 0.5
AGAP3-222	ENST00000490839	GNE	Q9Y223	722 aa	Known RBP	18.17	■□□□□ 0.5
AGAP3-222	ENST00000490839	CHD7	Q9P2D1	2997 aa		18.16	■□□□□ 0.5
AGAP3-222	ENST00000490839	TMEM232	C9JQI7	657 aa		18.16	■□□□□ 0.5
AGAP3-222	ENST00000490839	SMARCA5	O60264	1052 aa	Predicted RBP	18.16	■□□□□ 0.5
AGAP3-222	ENST00000490839	ZEB2	O60315	1214 aa		18.16	■□□□□ 0.5
AGAP3-222	ENST00000490839	ITGA7	Q13683	1181 aa		18.16	■□□□□ 0.5

Retrieved 100 of 20,778 RNA–protein pairs in 18 ms