RNA–Protein interactions for RNA: ENST00000490689.3

SHOX2-205, Transcript of short stature homeobox 2, humanhuman

TSL 5

Gene SHOX2, Length 4,184 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-205ENST00000490689 GYG1P46976 350 aa14.22□□□□□ -0.13
SHOX2-205ENST00000490689 ZNF658Q5TYW1 1059 aaPredicted RBP14.22□□□□□ -0.13
SHOX2-205ENST00000490689 NFRKBQ6P4R8 1299 aa14.22□□□□□ -0.13
SHOX2-205ENST00000490689 BLIDQ8IZY5 108 aa14.22□□□□□ -0.13
SHOX2-205ENST00000490689 ZNF287Q9HBT7 754 aa14.22□□□□□ -0.13
SHOX2-205ENST00000490689 FBXO2Q9UK22 296 aaPredicted RBP14.22□□□□□ -0.13
SHOX2-205ENST00000490689 NEXMIFQ5QGS0 1516 aa14.22□□□□□ -0.13
SHOX2-205ENST00000490689 GYPCP04921 128 aa14.22□□□□□ -0.13
SHOX2-205ENST00000490689 SCG2P13521 617 aa14.22□□□□□ -0.13
SHOX2-205ENST00000490689 POLR2FP61218 127 aaKnown RBP14.22□□□□□ -0.13
SHOX2-205ENST00000490689 LRRC41Q15345 812 aa14.22□□□□□ -0.13
SHOX2-205ENST00000490689 SFMBT2Q5VUG0 894 aa14.22□□□□□ -0.13
SHOX2-205ENST00000490689 LRRC31Q6UY01 552 aa14.22□□□□□ -0.13
SHOX2-205ENST00000490689 STRBPQ96SI9 672 aaKnown RBP14.22□□□□□ -0.13
SHOX2-205ENST00000490689 ADD3Q9UEY8 706 aaKnown RBP14.22□□□□□ -0.13
SHOX2-205ENST00000490689 UTP18Q9Y5J1 556 aaKnown RBP eCLIP14.22□□□□□ -0.13
SHOX2-205ENST00000490689 PDE8AO60658 829 aa14.21□□□□□ -0.13
SHOX2-205ENST00000490689 TFAP4Q01664 338 aa14.21□□□□□ -0.13
SHOX2-205ENST00000490689 MICAL1Q8TDZ2 1067 aa14.21□□□□□ -0.13
SHOX2-205ENST00000490689 ODF2LQ9ULJ1 636 aa14.21□□□□□ -0.13
SHOX2-205ENST00000490689 STK38LQ9Y2H1 464 aa14.21□□□□□ -0.13
SHOX2-205ENST00000490689 MROH2AA6NES4 1674 aa14.21□□□□□ -0.13
SHOX2-205ENST00000490689 ECM2O94769 699 aaPredicted RBP14.21□□□□□ -0.13
SHOX2-205ENST00000490689 LIFRP42702 1097 aa14.21□□□□□ -0.13
SHOX2-205ENST00000490689 IFNAR2P48551 515 aa14.21□□□□□ -0.13
SHOX2-205ENST00000490689 CTSWP56202 376 aa14.21□□□□□ -0.13
SHOX2-205ENST00000490689 EIF6P56537 245 aaKnown RBP14.21□□□□□ -0.13
SHOX2-205ENST00000490689 SF3B2Q13435 895 aaKnown RBP14.21□□□□□ -0.13
SHOX2-205ENST00000490689 CCDC24Q8N4L8 307 aa14.21□□□□□ -0.13
SHOX2-205ENST00000490689 TCP11Q8WWU5 503 aa14.21□□□□□ -0.13
SHOX2-205ENST00000490689 ACSBG1Q96GR2 724 aa14.21□□□□□ -0.13
SHOX2-205ENST00000490689 RNF26Q9BY78 433 aaPredicted RBP14.21□□□□□ -0.13
SHOX2-205ENST00000490689 NR1D1P20393 614 aa14.21□□□□□ -0.14
SHOX2-205ENST00000490689 HERC4Q5GLZ8 1057 aaPredicted RBP14.21□□□□□ -0.14
SHOX2-205ENST00000490689 RASGRP2Q7LDG7 609 aa14.21□□□□□ -0.14
SHOX2-205ENST00000490689 TFCP2L1Q9NZI6 479 aa14.21□□□□□ -0.14
SHOX2-205ENST00000490689 CIAO1O76071 339 aa14.2□□□□□ -0.14
SHOX2-205ENST00000490689 ASIC2Q16515 512 aa14.2□□□□□ -0.14
SHOX2-205ENST00000490689 RSRC2Q7L4I2 434 aaKnown RBP14.2□□□□□ -0.14
SHOX2-205ENST00000490689 PEX26Q7Z412 305 aa14.2□□□□□ -0.14
SHOX2-205ENST00000490689 CCDC26Q8TAB7 109 aa14.2□□□□□ -0.14
SHOX2-205ENST00000490689 SNX29Q8TEQ0 813 aa14.2□□□□□ -0.14
SHOX2-205ENST00000490689 LRRC1Q9BTT6 524 aa14.2□□□□□ -0.14
SHOX2-205ENST00000490689 LSM14BQ9BX40 385 aaKnown RBP14.2□□□□□ -0.14
SHOX2-205ENST00000490689 NSRP1Q9H0G5 558 aaKnown RBP14.2□□□□□ -0.14
SHOX2-205ENST00000490689 ANKZF1Q9H8Y5 726 aa14.2□□□□□ -0.14
SHOX2-205ENST00000490689 DEPDC5O75140 1603 aa14.2□□□□□ -0.14
SHOX2-205ENST00000490689 PP2D1A8MPX8 630 aa14.2□□□□□ -0.14
SHOX2-205ENST00000490689 GUCY1A3Q02108 690 aa14.2□□□□□ -0.14
SHOX2-205ENST00000490689 A2ML1A8K2U0 1454 aa14.2□□□□□ -0.14
SHOX2-205ENST00000490689 IL2RBP14784 551 aa14.2□□□□□ -0.14
SHOX2-205ENST00000490689 N4BP2L2Q92802 583 aaPredicted RBP14.2□□□□□ -0.14
SHOX2-205ENST00000490689 A0A1W2PRG0 241 aa14.19□□□□□ -0.14
SHOX2-205ENST00000490689 KRIT1O00522 736 aa14.19□□□□□ -0.14
SHOX2-205ENST00000490689 EEF1GP26641 437 aaKnown RBP14.19□□□□□ -0.14
SHOX2-205ENST00000490689 ZBED6P86452 979 aa14.19□□□□□ -0.14
SHOX2-205ENST00000490689 ZBTB38Q8NAP3 1195 aaPredicted RBP14.19□□□□□ -0.14
SHOX2-205ENST00000490689 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.19□□□□□ -0.14
SHOX2-205ENST00000490689 PSD3Q9NYI0 1048 aa14.19□□□□□ -0.14
SHOX2-205ENST00000490689 STIM2Q9P246 746 aa14.19□□□□□ -0.14
SHOX2-205ENST00000490689 GNA11P29992 359 aa14.19□□□□□ -0.14
SHOX2-205ENST00000490689 KIF11P52732 1056 aa14.19□□□□□ -0.14
SHOX2-205ENST00000490689 DYNLL1P63167 89 aaKnown RBP14.19□□□□□ -0.14
SHOX2-205ENST00000490689 GKAP1Q5VSY0 366 aaPredicted RBP14.19□□□□□ -0.14
SHOX2-205ENST00000490689 LMBR1Q8WVP7 490 aa14.19□□□□□ -0.14
SHOX2-205ENST00000490689 RRP36Q96EU6 259 aaKnown RBP14.19□□□□□ -0.14
SHOX2-205ENST00000490689 ABCB4P21439 1286 aa14.19□□□□□ -0.14
SHOX2-205ENST00000490689 IRAK1P51617 712 aa14.19□□□□□ -0.14
SHOX2-205ENST00000490689 FOXO4P98177 505 aa14.19□□□□□ -0.14
SHOX2-205ENST00000490689 LLGL1Q15334 1064 aa14.19□□□□□ -0.14
SHOX2-205ENST00000490689 VEZTQ9HBM0 779 aa14.19□□□□□ -0.14
SHOX2-205ENST00000490689 BIN2Q9UBW5 565 aaPredicted RBP14.19□□□□□ -0.14
SHOX2-205ENST00000490689 UTP11Q9Y3A2 253 aaKnown RBP14.19□□□□□ -0.14
SHOX2-205ENST00000490689 PCDHA13Q9Y5I0 950 aa14.19□□□□□ -0.14
SHOX2-205ENST00000490689 BAZ2BQ9UIF8 2168 aaKnown RBP14.19□□□□□ -0.14
SHOX2-205ENST00000490689 RFX5P48382 616 aaPredicted RBP14.19□□□□□ -0.14
SHOX2-205ENST00000490689 CORO7P57737 925 aa14.19□□□□□ -0.14
SHOX2-205ENST00000490689 PLS1Q14651 629 aa14.19□□□□□ -0.14
SHOX2-205ENST00000490689 PTPAQ15257 358 aa14.19□□□□□ -0.14
SHOX2-205ENST00000490689 RPAINQ86UA6 219 aa14.19□□□□□ -0.14
SHOX2-205ENST00000490689 HPCAL4Q9UM19 191 aa14.19□□□□□ -0.14
SHOX2-205ENST00000490689 NPHP4O75161 1426 aaPredicted RBP14.18□□□□□ -0.14
SHOX2-205ENST00000490689 BAG3O95817 575 aa14.18□□□□□ -0.14
SHOX2-205ENST00000490689 KRT14P02533 472 aa14.18□□□□□ -0.14
SHOX2-205ENST00000490689 RBM5P52756 815 aaKnown RBP eCLIP14.18□□□□□ -0.14
SHOX2-205ENST00000490689 PPP2R5BQ15173 497 aa14.18□□□□□ -0.14
SHOX2-205ENST00000490689 SNCBQ16143 134 aa14.18□□□□□ -0.14
SHOX2-205ENST00000490689 P2RX5Q93086 422 aa14.18□□□□□ -0.14
SHOX2-205ENST00000490689 MRRFQ96E11 262 aaKnown RBP14.18□□□□□ -0.14
SHOX2-205ENST00000490689 LRRC27Q9C0I9 530 aa14.18□□□□□ -0.14
SHOX2-205ENST00000490689 AGPAT5Q9NUQ2 364 aa14.18□□□□□ -0.14
SHOX2-205ENST00000490689 ZNF652Q9Y2D9 606 aa14.18□□□□□ -0.14
SHOX2-205ENST00000490689 HECW2Q9P2P5 1572 aa14.18□□□□□ -0.14
SHOX2-205ENST00000490689 TBCAO75347 108 aaKnown RBP14.18□□□□□ -0.14
SHOX2-205ENST00000490689 PCCAP05165 728 aaPredicted RBP14.18□□□□□ -0.14
SHOX2-205ENST00000490689 NONOQ15233 471 aaKnown RBP eCLIP14.18□□□□□ -0.14
SHOX2-205ENST00000490689 GRIPAP1Q4V328 841 aa14.18□□□□□ -0.14
SHOX2-205ENST00000490689 SYCP3Q8IZU3 236 aa14.18□□□□□ -0.14
SHOX2-205ENST00000490689 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.18□□□□□ -0.14
SHOX2-205ENST00000490689 CD44P16070 742 aaKnown RBP14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms