RNA–Protein interactions for RNA: ENST00000490543.5

SRRM1-217, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 5

Gene SRRM1, Length 673 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-217ENST00000490543 LTBP2Q14767 1821 aa11□□□□□ -0.65
SRRM1-217ENST00000490543 TRIM43BA6NCK2 446 aa10.99□□□□□ -0.65
SRRM1-217ENST00000490543 AXIN1O15169 862 aa10.99□□□□□ -0.65
SRRM1-217ENST00000490543 SIAH2O43255 324 aa10.99□□□□□ -0.65
SRRM1-217ENST00000490543 MSCO60682 206 aa10.99□□□□□ -0.65
SRRM1-217ENST00000490543 F12P00748 615 aaPredicted RBP10.99□□□□□ -0.65
SRRM1-217ENST00000490543 GNAI3P08754 354 aa10.99□□□□□ -0.65
SRRM1-217ENST00000490543 VCAM1P19320 739 aa10.99□□□□□ -0.65
SRRM1-217ENST00000490543 ADCYAP1R1P41586 468 aa10.99□□□□□ -0.65
SRRM1-217ENST00000490543 G3BP1Q13283 466 aaKnown RBP eCLIP10.99□□□□□ -0.65
SRRM1-217ENST00000490543 RAB3GAP1Q15042 981 aa10.99□□□□□ -0.65
SRRM1-217ENST00000490543 CTC1Q2NKJ3 1217 aa10.99□□□□□ -0.65
SRRM1-217ENST00000490543 TRIM60Q495X7 471 aa10.99□□□□□ -0.65
SRRM1-217ENST00000490543 PRAMEF19Q5SWL8 479 aa10.99□□□□□ -0.65
SRRM1-217ENST00000490543 TATDN1Q6P1N9 297 aa10.99□□□□□ -0.65
SRRM1-217ENST00000490543 TSC1Q92574 1164 aa10.99□□□□□ -0.65
SRRM1-217ENST00000490543 FERMT2Q96AC1 680 aa10.99□□□□□ -0.65
SRRM1-217ENST00000490543 TRIM43Q96BQ3 446 aaPredicted RBP10.99□□□□□ -0.65
SRRM1-217ENST00000490543 DBNDD2Q9BQY9 259 aa10.99□□□□□ -0.65
SRRM1-217ENST00000490543 PIH1D3Q9NQM4 214 aaKnown RBP10.99□□□□□ -0.65
SRRM1-217ENST00000490543 DACH1Q9UI36 760 aa10.99□□□□□ -0.65
SRRM1-217ENST00000490543 TNNQ9UQP3 1299 aa10.99□□□□□ -0.65
SRRM1-217ENST00000490543 IVNS1ABPQ9Y6Y0 642 aa10.99□□□□□ -0.65
SRRM1-217ENST00000490543 MYO5AQ9Y4I1 1855 aaKnown RBP10.99□□□□□ -0.65
SRRM1-217ENST00000490543 RLFQ13129 1914 aa10.99□□□□□ -0.65
SRRM1-217ENST00000490543 COBLO75128 1261 aa10.98□□□□□ -0.65
SRRM1-217ENST00000490543 HLA-DOAP06340 250 aa10.98□□□□□ -0.65
SRRM1-217ENST00000490543 CYP7A1P22680 504 aa10.98□□□□□ -0.65
SRRM1-217ENST00000490543 ITGB8P26012 769 aa10.98□□□□□ -0.65
SRRM1-217ENST00000490543 ZAP70P43403 619 aa10.98□□□□□ -0.65
SRRM1-217ENST00000490543 SMCPP49901 116 aaPredicted RBP10.98□□□□□ -0.65
SRRM1-217ENST00000490543 EPHB4P54760 987 aa10.98□□□□□ -0.65
SRRM1-217ENST00000490543 SMAD3P84022 425 aaKnown RBP10.98□□□□□ -0.65
SRRM1-217ENST00000490543 TTC39AQ5SRH9 613 aa10.98□□□□□ -0.65
SRRM1-217ENST00000490543 LBX2Q6XYB7 198 aa10.98□□□□□ -0.65
SRRM1-217ENST00000490543 DPP9Q86TI2 863 aa10.98□□□□□ -0.65
SRRM1-217ENST00000490543 MIGA1Q8NAN2 632 aa10.98□□□□□ -0.65
SRRM1-217ENST00000490543 ZNF511Q8NB15 262 aa10.98□□□□□ -0.65
SRRM1-217ENST00000490543 ARRDC4Q8NCT1 418 aa10.98□□□□□ -0.65
SRRM1-217ENST00000490543 FAM117AQ9C073 453 aa10.98□□□□□ -0.65
SRRM1-217ENST00000490543 KIAA1683Q9H0B3 1180 aa10.98□□□□□ -0.65
SRRM1-217ENST00000490543 RPAP3Q9H6T3 665 aaPredicted RBP10.98□□□□□ -0.65
SRRM1-217ENST00000490543 PDLIM7Q9NR12 457 aa10.98□□□□□ -0.65
SRRM1-217ENST00000490543 MAP10Q9P2G4 905 aa10.98□□□□□ -0.65
SRRM1-217ENST00000490543 CDH23Q9H251 3354 aa10.97□□□□□ -0.65
SRRM1-217ENST00000490543 FOSL2P15408 326 aa10.97□□□□□ -0.65
SRRM1-217ENST00000490543 ADORA2AP29274 412 aa10.97□□□□□ -0.65
SRRM1-217ENST00000490543 GUCY1A2P33402 732 aa10.97□□□□□ -0.65
SRRM1-217ENST00000490543 USP14P54578 494 aa10.97□□□□□ -0.65
SRRM1-217ENST00000490543 TLE2Q04725 743 aa10.97□□□□□ -0.65
SRRM1-217ENST00000490543 SNX17Q15036 470 aa10.97□□□□□ -0.65
SRRM1-217ENST00000490543 CERKLQ49MI3 558 aaPredicted RBP10.97□□□□□ -0.65
SRRM1-217ENST00000490543 USP38Q8NB14 1042 aa10.97□□□□□ -0.65
SRRM1-217ENST00000490543 MOV10L1Q9BXT6 1211 aaKnown RBP10.97□□□□□ -0.65
SRRM1-217ENST00000490543 FOCADQ5VW36 1801 aa10.97□□□□□ -0.65
SRRM1-217ENST00000490543 SMCHD1A6NHR9 2005 aa10.96□□□□□ -0.65
SRRM1-217ENST00000490543 A0A1W2PRG0 241 aa10.96□□□□□ -0.65
SRRM1-217ENST00000490543 KBTBD13C9JR72 458 aa10.96□□□□□ -0.65
SRRM1-217ENST00000490543 SEPT4O43236 478 aa10.96□□□□□ -0.65
SRRM1-217ENST00000490543 SHMT1P34896 483 aa10.96□□□□□ -0.65
SRRM1-217ENST00000490543 PLCD1P51178 756 aa10.96□□□□□ -0.65
SRRM1-217ENST00000490543 RARSP54136 660 aaKnown RBP10.96□□□□□ -0.65
SRRM1-217ENST00000490543 GRIN2CQ14957 1233 aa10.96□□□□□ -0.65
SRRM1-217ENST00000490543 LRRC41Q15345 812 aa10.96□□□□□ -0.65
SRRM1-217ENST00000490543 ABCB5Q2M3G0 1257 aa10.96□□□□□ -0.65
SRRM1-217ENST00000490543 TNNI3KQ59H18 835 aa10.96□□□□□ -0.65
SRRM1-217ENST00000490543 FAM47AQ5JRC9 791 aa10.96□□□□□ -0.65
SRRM1-217ENST00000490543 CCDC158Q5M9N0 1113 aa10.96□□□□□ -0.65
SRRM1-217ENST00000490543 OLFML2BQ68BL8 750 aa10.96□□□□□ -0.65
SRRM1-217ENST00000490543 ATF7IPQ6VMQ6 1270 aa10.96□□□□□ -0.65
SRRM1-217ENST00000490543 HPS1Q92902 700 aa10.96□□□□□ -0.65
SRRM1-217ENST00000490543 SERPINB13Q9UIV8 391 aa10.96□□□□□ -0.65
SRRM1-217ENST00000490543 FPGT-TNNI3KV9GXZ4 949 aa10.96□□□□□ -0.65
SRRM1-217ENST00000490543 MYH1P12882 1939 aa10.96□□□□□ -0.66
SRRM1-217ENST00000490543 MYO9BQ13459 2157 aa10.95□□□□□ -0.66
SRRM1-217ENST00000490543 STRNO43815 780 aa10.95□□□□□ -0.66
SRRM1-217ENST00000490543 GNAI2P04899 355 aa10.95□□□□□ -0.66
SRRM1-217ENST00000490543 CT47B1P0C2W7 299 aaPredicted RBP10.95□□□□□ -0.66
SRRM1-217ENST00000490543 ERCC3P19447 782 aa10.95□□□□□ -0.66
SRRM1-217ENST00000490543 USP5P45974 858 aa10.95□□□□□ -0.66
SRRM1-217ENST00000490543 COG2Q14746 738 aa10.95□□□□□ -0.66
SRRM1-217ENST00000490543 SEPT2Q15019 361 aa10.95□□□□□ -0.66
SRRM1-217ENST00000490543 KIAA1755Q5JYT7 1200 aa10.95□□□□□ -0.66
SRRM1-217ENST00000490543 ARHGAP45Q92619 1136 aa10.95□□□□□ -0.66
SRRM1-217ENST00000490543 DDRGK1Q96HY6 314 aa10.95□□□□□ -0.66
SRRM1-217ENST00000490543 SPATC1LQ9H0A9 340 aa10.95□□□□□ -0.66
SRRM1-217ENST00000490543 EHD4Q9H223 541 aa10.95□□□□□ -0.66
SRRM1-217ENST00000490543 GPR108Q9NPR9 543 aa10.95□□□□□ -0.66
SRRM1-217ENST00000490543 TLR7Q9NYK1 1049 aaKnown RBP10.95□□□□□ -0.66
SRRM1-217ENST00000490543 RAPGEFL1Q9UHV5 662 aa10.95□□□□□ -0.66
SRRM1-217ENST00000490543 NCOR1O75376 2440 aa10.94□□□□□ -0.66
SRRM1-217ENST00000490543 IDH1O75874 414 aaKnown RBP10.94□□□□□ -0.66
SRRM1-217ENST00000490543 C1orf53Q5VUE5 145 aa10.94□□□□□ -0.66
SRRM1-217ENST00000490543 MAGEB6Q8N7X4 407 aa10.94□□□□□ -0.66
SRRM1-217ENST00000490543 ZNF512BQ96KM6 892 aaPredicted RBP10.94□□□□□ -0.66
SRRM1-217ENST00000490543 RNPC3Q96LT9 517 aaKnown RBP10.94□□□□□ -0.66
SRRM1-217ENST00000490543 ANTXR1Q9H6X2 564 aa10.94□□□□□ -0.66
SRRM1-217ENST00000490543 CABP5Q9NP86 173 aa10.94□□□□□ -0.66
SRRM1-217ENST00000490543 DBNLQ9UJU6 430 aaKnown RBP10.94□□□□□ -0.66
SRRM1-217ENST00000490543 TRIM27P14373 513 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms