RNA–Protein interactions for RNA: ENST00000490539.1

CSTF1-205, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 5

Gene CSTF1, Length 929 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-205ENST00000490539 CC2D1BQ5T0F9 858 aaKnown RBP6.17□□□□□ -1.42
CSTF1-205ENST00000490539 CDC37L1Q7L3B6 337 aa6.17□□□□□ -1.42
CSTF1-205ENST00000490539 ZDHHC13Q8IUH4 622 aa6.17□□□□□ -1.42
CSTF1-205ENST00000490539 GRIN3AQ8TCU5 1115 aa6.17□□□□□ -1.42
CSTF1-205ENST00000490539 CRELD1Q96HD1 420 aa6.17□□□□□ -1.42
CSTF1-205ENST00000490539 NOC4LQ9BVI4 516 aaKnown RBP6.17□□□□□ -1.42
CSTF1-205ENST00000490539 PRKAG2Q9UGJ0 569 aa6.17□□□□□ -1.42
CSTF1-205ENST00000490539 PCOLCE2Q9UKZ9 415 aa6.17□□□□□ -1.42
CSTF1-205ENST00000490539 KIF20BQ96Q89 1820 aa6.17□□□□□ -1.42
CSTF1-205ENST00000490539 INSRP06213 1382 aa6.17□□□□□ -1.42
CSTF1-205ENST00000490539 NEFMP07197 916 aa6.16□□□□□ -1.42
CSTF1-205ENST00000490539 TTLL4Q14679 1199 aa6.16□□□□□ -1.42
CSTF1-205ENST00000490539 GPR162Q16538 588 aa6.16□□□□□ -1.42
CSTF1-205ENST00000490539 CYP27C1Q4G0S4 372 aa6.16□□□□□ -1.42
CSTF1-205ENST00000490539 HDXQ7Z353 690 aa6.16□□□□□ -1.42
CSTF1-205ENST00000490539 ZAR1Q86SH2 424 aa6.16□□□□□ -1.42
CSTF1-205ENST00000490539 KCT2Q8NC54 265 aa6.16□□□□□ -1.42
CSTF1-205ENST00000490539 RNF214Q8ND24 703 aa6.16□□□□□ -1.42
CSTF1-205ENST00000490539 GIPC2Q8TF65 315 aa6.16□□□□□ -1.42
CSTF1-205ENST00000490539 FAM161BQ96MY7 647 aa6.16□□□□□ -1.42
CSTF1-205ENST00000490539 ANP32EQ9BTT0 268 aa6.16□□□□□ -1.42
CSTF1-205ENST00000490539 KRTAP4-9Q9BYQ8 210 aa6.16□□□□□ -1.42
CSTF1-205ENST00000490539 DISC1Q9NRI5 854 aa6.16□□□□□ -1.42
CSTF1-205ENST00000490539 PIM2Q9P1W9 311 aa6.16□□□□□ -1.42
CSTF1-205ENST00000490539 NUDCQ9Y266 331 aa6.16□□□□□ -1.42
CSTF1-205ENST00000490539 USP54Q70EL1 1684 aa6.16□□□□□ -1.42
CSTF1-205ENST00000490539 LMO7Q8WWI1 1683 aa6.16□□□□□ -1.42
CSTF1-205ENST00000490539 NRAPQ86VF7 1730 aa6.16□□□□□ -1.42
CSTF1-205ENST00000490539 LTN1O94822 1766 aa6.16□□□□□ -1.42
CSTF1-205ENST00000490539 CASZ1Q86V15 1759 aa6.16□□□□□ -1.42
CSTF1-205ENST00000490539 FANCGO15287 622 aa6.15□□□□□ -1.42
CSTF1-205ENST00000490539 HCLS1P14317 486 aaPredicted RBP6.15□□□□□ -1.42
CSTF1-205ENST00000490539 MFAP1P55081 439 aaKnown RBP6.15□□□□□ -1.42
CSTF1-205ENST00000490539 PWP1Q13610 501 aa6.15□□□□□ -1.42
CSTF1-205ENST00000490539 HSP90AB2PQ58FF8 381 aa6.15□□□□□ -1.42
CSTF1-205ENST00000490539 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.15□□□□□ -1.42
CSTF1-205ENST00000490539 ZCRB1Q8TBF4 217 aaKnown RBP6.15□□□□□ -1.42
CSTF1-205ENST00000490539 MIR1-1HGQ9H1L0 117 aa6.15□□□□□ -1.42
CSTF1-205ENST00000490539 LGR6Q9HBX8 967 aa6.15□□□□□ -1.42
CSTF1-205ENST00000490539 RNF19AQ9NV58 838 aa6.15□□□□□ -1.42
CSTF1-205ENST00000490539 POLKQ9UBT6 870 aa6.15□□□□□ -1.42
CSTF1-205ENST00000490539 NPC1L1Q9UHC9 1359 aa6.15□□□□□ -1.43
CSTF1-205ENST00000490539 OVOS2A0A0G2JMS6 1433 aa6.15□□□□□ -1.43
CSTF1-205ENST00000490539 FAM208AQ9UK61 1670 aaKnown RBP6.14□□□□□ -1.43
CSTF1-205ENST00000490539 FBLN1P23142 703 aa6.14□□□□□ -1.43
CSTF1-205ENST00000490539 MAP3K11Q16584 847 aa6.14□□□□□ -1.43
CSTF1-205ENST00000490539 MEI1Q5TIA1 1274 aa6.14□□□□□ -1.43
CSTF1-205ENST00000490539 CACNA2D2Q9NY47 1150 aa6.14□□□□□ -1.43
CSTF1-205ENST00000490539 PCDHGC5Q9Y5F6 944 aa6.14□□□□□ -1.43
CSTF1-205ENST00000490539 SNCAIPQ9Y6H5 919 aa6.14□□□□□ -1.43
CSTF1-205ENST00000490539 PCDH11XQ9BZA7 1347 aa6.14□□□□□ -1.43
CSTF1-205ENST00000490539 PCDH11YQ9BZA8 1340 aa6.14□□□□□ -1.43
CSTF1-205ENST00000490539 ADCY9O60503 1353 aa6.14□□□□□ -1.43
CSTF1-205ENST00000490539 DCDC2CA8MYV0 355 aa6.13□□□□□ -1.43
CSTF1-205ENST00000490539 CYP26A1O43174 497 aa6.13□□□□□ -1.43
CSTF1-205ENST00000490539 DIAPH1O60610 1272 aaKnown RBP6.13□□□□□ -1.43
CSTF1-205ENST00000490539 F13BP05160 661 aa6.13□□□□□ -1.43
CSTF1-205ENST00000490539 HSP90AB1P08238 724 aaKnown RBP6.13□□□□□ -1.43
CSTF1-205ENST00000490539 MTHFSP49914 203 aa6.13□□□□□ -1.43
CSTF1-205ENST00000490539 LIG3P49916 1009 aa6.13□□□□□ -1.43
CSTF1-205ENST00000490539 AMOTQ4VCS5 1084 aa6.13□□□□□ -1.43
CSTF1-205ENST00000490539 PLEKHO1Q53GL0 409 aaPredicted RBP6.13□□□□□ -1.43
CSTF1-205ENST00000490539 C1orf141Q5JVX7 400 aa6.13□□□□□ -1.43
CSTF1-205ENST00000490539 NBPF6Q5VWK0 638 aa6.13□□□□□ -1.43
CSTF1-205ENST00000490539 OGFOD3Q6PK18 319 aa6.13□□□□□ -1.43
CSTF1-205ENST00000490539 AGMOQ6ZNB7 445 aa6.13□□□□□ -1.43
CSTF1-205ENST00000490539 C12orf40Q86WS4 652 aa6.13□□□□□ -1.43
CSTF1-205ENST00000490539 RELL1Q8IUW5 271 aa6.13□□□□□ -1.43
CSTF1-205ENST00000490539 ZNF507Q8TCN5 953 aa6.13□□□□□ -1.43
CSTF1-205ENST00000490539 SYTL4Q96C24 671 aaPredicted RBP6.13□□□□□ -1.43
CSTF1-205ENST00000490539 NBPF4Q96M43 638 aa6.13□□□□□ -1.43
CSTF1-205ENST00000490539 PNNQ9H307 717 aaKnown RBP6.13□□□□□ -1.43
CSTF1-205ENST00000490539 MAP3K5Q99683 1374 aa6.13□□□□□ -1.43
CSTF1-205ENST00000490539 COL18A1P39060 1754 aa6.13□□□□□ -1.43
CSTF1-205ENST00000490539 KAT6BQ8WYB5 2073 aa6.13□□□□□ -1.43
CSTF1-205ENST00000490539 PRR19A6NJB7 356 aa6.12□□□□□ -1.43
CSTF1-205ENST00000490539 U2SURPO15042 1029 aaKnown RBP6.12□□□□□ -1.43
CSTF1-205ENST00000490539 ADAMTS4O75173 837 aa6.12□□□□□ -1.43
CSTF1-205ENST00000490539 FOSL1P15407 271 aa6.12□□□□□ -1.43
CSTF1-205ENST00000490539 SPINK2P20155 84 aa6.12□□□□□ -1.43
CSTF1-205ENST00000490539 EIF4A2Q14240 407 aaKnown RBP6.12□□□□□ -1.43
CSTF1-205ENST00000490539 RALBP1Q15311 655 aa6.12□□□□□ -1.43
CSTF1-205ENST00000490539 PPM1JQ5JR12 505 aa6.12□□□□□ -1.43
CSTF1-205ENST00000490539 MPRIPQ6WCQ1 1025 aa6.12□□□□□ -1.43
CSTF1-205ENST00000490539 ARHGAP27Q6ZUM4 889 aa6.12□□□□□ -1.43
CSTF1-205ENST00000490539 USHBP1Q8N6Y0 703 aa6.12□□□□□ -1.43
CSTF1-205ENST00000490539 ZNF526Q8TF50 670 aaPredicted RBP6.12□□□□□ -1.43
CSTF1-205ENST00000490539 ABHD8Q96I13 439 aa6.12□□□□□ -1.43
CSTF1-205ENST00000490539 RGPD5Q99666 1765 aa6.12□□□□□ -1.43
CSTF1-205ENST00000490539 CSADQ9Y600 493 aa6.12□□□□□ -1.43
CSTF1-205ENST00000490539 A0A0C4DFX4 3053 aa6.12□□□□□ -1.43
CSTF1-205ENST00000490539 MAP2P11137 1827 aaKnown RBP6.11□□□□□ -1.43
CSTF1-205ENST00000490539 PARP4Q9UKK3 1724 aaKnown RBP6.11□□□□□ -1.43
CSTF1-205ENST00000490539 ANKRD26Q9UPS8 1709 aa6.11□□□□□ -1.43
CSTF1-205ENST00000490539 THSD7AQ9UPZ6 1657 aa6.11□□□□□ -1.43
CSTF1-205ENST00000490539 PLEKHG2Q9H7P9 1386 aa6.11□□□□□ -1.43
CSTF1-205ENST00000490539 PRAMEF27A3QJZ7 478 aa6.11□□□□□ -1.43
CSTF1-205ENST00000490539 FAM170BA6NMN3 283 aa6.11□□□□□ -1.43
CSTF1-205ENST00000490539 BPNT1O95861 308 aa6.11□□□□□ -1.43
CSTF1-205ENST00000490539 WNT11O96014 354 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms