RNA–Protein interactions for RNA: ENST00000490476.1

SSX2IP-208, Transcript of SSX family member 2 interacting protein, humanhuman

TSL 3

Gene SSX2IP, Length 716 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IP-208ENST00000490476 APPBP2Q92624 585 aa6.88□□□□□ -1.31
SSX2IP-208ENST00000490476 ZNF512BQ96KM6 892 aaPredicted RBP6.88□□□□□ -1.31
SSX2IP-208ENST00000490476 DHRS1Q96LJ7 313 aa6.88□□□□□ -1.31
SSX2IP-208ENST00000490476 KRTAP4-6Q9BYQ5 205 aa6.88□□□□□ -1.31
SSX2IP-208ENST00000490476 ZNF214Q9UL59 606 aaPredicted RBP6.88□□□□□ -1.31
SSX2IP-208ENST00000490476 EFCAB6Q5THR3 1501 aa6.87□□□□□ -1.31
SSX2IP-208ENST00000490476 FMN1Q68DA7 1419 aa6.87□□□□□ -1.31
SSX2IP-208ENST00000490476 PITPNM2Q9BZ72 1349 aa6.87□□□□□ -1.31
SSX2IP-208ENST00000490476 SUSD5O60279 629 aa6.87□□□□□ -1.31
SSX2IP-208ENST00000490476 CLEC3AO75596 197 aa6.87□□□□□ -1.31
SSX2IP-208ENST00000490476 UBOX5O94941 541 aa6.87□□□□□ -1.31
SSX2IP-208ENST00000490476 PREPP48147 710 aa6.87□□□□□ -1.31
SSX2IP-208ENST00000490476 HNRNPMP52272 730 aaKnown RBP eCLIP6.87□□□□□ -1.31
SSX2IP-208ENST00000490476 SQSTM1Q13501 440 aa6.87□□□□□ -1.31
SSX2IP-208ENST00000490476 SV2CQ496J9 727 aa6.87□□□□□ -1.31
SSX2IP-208ENST00000490476 C2orf27AQ580R0 203 aa6.87□□□□□ -1.31
SSX2IP-208ENST00000490476 PODNQ7Z5L7 613 aa6.87□□□□□ -1.31
SSX2IP-208ENST00000490476 ST13P5Q8NFI4 369 aaPredicted RBP6.87□□□□□ -1.31
SSX2IP-208ENST00000490476 PPP1R14AQ96A00 147 aa6.87□□□□□ -1.31
SSX2IP-208ENST00000490476 FOXQ1Q9C009 403 aa6.87□□□□□ -1.31
SSX2IP-208ENST00000490476 AKTIPQ9H8T0 292 aa6.87□□□□□ -1.31
SSX2IP-208ENST00000490476 DAGLAQ9Y4D2 1042 aa6.87□□□□□ -1.31
SSX2IP-208ENST00000490476 EID1Q9Y6B2 187 aa6.87□□□□□ -1.31
SSX2IP-208ENST00000490476 PLCH1Q4KWH8 1693 aa6.87□□□□□ -1.31
SSX2IP-208ENST00000490476 MYOM2P54296 1465 aa6.86□□□□□ -1.31
SSX2IP-208ENST00000490476 CNTNAP5Q8WYK1 1306 aa6.86□□□□□ -1.31
SSX2IP-208ENST00000490476 CST3P01034 146 aaPredicted RBP6.86□□□□□ -1.31
SSX2IP-208ENST00000490476 PMS1P54277 932 aaKnown RBP6.86□□□□□ -1.31
SSX2IP-208ENST00000490476 HTRA3P83110 453 aa6.86□□□□□ -1.31
SSX2IP-208ENST00000490476 BBS9Q3SYG4 887 aa6.86□□□□□ -1.31
SSX2IP-208ENST00000490476 ARMCX6Q7L4S7 300 aa6.86□□□□□ -1.31
SSX2IP-208ENST00000490476 PPFIBP1Q86W92 1011 aa6.86□□□□□ -1.31
SSX2IP-208ENST00000490476 CCDC144CPQ8IYA2 1237 aa6.86□□□□□ -1.31
SSX2IP-208ENST00000490476 THAP3Q8WTV1 239 aaPredicted RBP6.86□□□□□ -1.31
SSX2IP-208ENST00000490476 CYB5D2Q8WUJ1 264 aa6.86□□□□□ -1.31
SSX2IP-208ENST00000490476 SLC26A8Q96RN1 970 aa6.86□□□□□ -1.31
SSX2IP-208ENST00000490476 SLKQ9H2G2 1235 aaPredicted RBP6.86□□□□□ -1.31
SSX2IP-208ENST00000490476 NOP53Q9NZM5 478 aaKnown RBP6.86□□□□□ -1.31
SSX2IP-208ENST00000490476 SUCOQ9UBS9 1254 aaKnown RBP6.86□□□□□ -1.31
SSX2IP-208ENST00000490476 PCOLCE2Q9UKZ9 415 aa6.86□□□□□ -1.31
SSX2IP-208ENST00000490476 PTCH2Q9Y6C5 1203 aa6.86□□□□□ -1.31
SSX2IP-208ENST00000490476 NWD2Q9ULI1 1742 aa6.86□□□□□ -1.31
SSX2IP-208ENST00000490476 CACNA1AO00555 2505 aa6.86□□□□□ -1.31
SSX2IP-208ENST00000490476 SLIT2O94813 1529 aa6.86□□□□□ -1.31
SSX2IP-208ENST00000490476 ADCY9O60503 1353 aa6.85□□□□□ -1.31
SSX2IP-208ENST00000490476 MAP3K5Q99683 1374 aa6.85□□□□□ -1.31
SSX2IP-208ENST00000490476 C9IYK1 514 aa6.85□□□□□ -1.31
SSX2IP-208ENST00000490476 FAM153BP0C7A2 387 aa6.85□□□□□ -1.31
SSX2IP-208ENST00000490476 CCNFP41002 786 aa6.85□□□□□ -1.31
SSX2IP-208ENST00000490476 RGS19P49795 217 aa6.85□□□□□ -1.31
SSX2IP-208ENST00000490476 SLC10A6Q3KNW5 377 aa6.85□□□□□ -1.31
SSX2IP-208ENST00000490476 RNF187Q5TA31 235 aaPredicted RBP6.85□□□□□ -1.31
SSX2IP-208ENST00000490476 TMEM130Q8N3G9 435 aa6.85□□□□□ -1.31
SSX2IP-208ENST00000490476 SPATA9Q9BWV2 254 aa6.85□□□□□ -1.31
SSX2IP-208ENST00000490476 LRP2BPQ9P2M1 347 aa6.85□□□□□ -1.31
SSX2IP-208ENST00000490476 USP32Q8NFA0 1604 aa6.85□□□□□ -1.31
SSX2IP-208ENST00000490476 ERVK-7P63135 1459 aa6.85□□□□□ -1.31
SSX2IP-208ENST00000490476 NALCNQ8IZF0 1738 aa6.84□□□□□ -1.31
SSX2IP-208ENST00000490476 ARHGEF28Q8N1W1 1705 aaKnown RBP6.84□□□□□ -1.31
SSX2IP-208ENST00000490476 PIK3C2BO00750 1634 aa6.84□□□□□ -1.31
SSX2IP-208ENST00000490476 SPAG9O60271 1321 aaKnown RBP6.84□□□□□ -1.31
SSX2IP-208ENST00000490476 NFICP08651 508 aa6.84□□□□□ -1.31
SSX2IP-208ENST00000490476 C21orf62-AS1Q17RA5 79 aa6.84□□□□□ -1.31
SSX2IP-208ENST00000490476 PLEKHG4Q58EX7 1191 aa6.84□□□□□ -1.31
SSX2IP-208ENST00000490476 HEATR6Q6AI08 1181 aaKnown RBP6.84□□□□□ -1.31
SSX2IP-208ENST00000490476 FILIP1Q7Z7B0 1213 aa6.84□□□□□ -1.31
SSX2IP-208ENST00000490476 UNC5CLQ8IV45 518 aa6.84□□□□□ -1.31
SSX2IP-208ENST00000490476 ANKRD13AQ8IZ07 590 aa6.84□□□□□ -1.31
SSX2IP-208ENST00000490476 FBLIM1Q8WUP2 373 aa6.84□□□□□ -1.31
SSX2IP-208ENST00000490476 DDX17Q92841 729 aaKnown RBP6.84□□□□□ -1.31
SSX2IP-208ENST00000490476 FGD4Q96M96 766 aa6.84□□□□□ -1.31
SSX2IP-208ENST00000490476 MIPEPQ99797 713 aa6.84□□□□□ -1.31
SSX2IP-208ENST00000490476 CEP41Q9BYV8 373 aa6.84□□□□□ -1.31
SSX2IP-208ENST00000490476 MKRN2Q9H000 416 aaKnown RBP6.84□□□□□ -1.31
SSX2IP-208ENST00000490476 GSX1Q9H4S2 264 aaPredicted RBP6.84□□□□□ -1.31
SSX2IP-208ENST00000490476 TMEM260Q9NX78 707 aa6.84□□□□□ -1.31
SSX2IP-208ENST00000490476 SYCP2Q9BX26 1530 aa6.84□□□□□ -1.31
SSX2IP-208ENST00000490476 RGPD3A6NKT7 1758 aaPredicted RBP6.84□□□□□ -1.31
SSX2IP-208ENST00000490476 RGPD4Q7Z3J3 1758 aa6.84□□□□□ -1.31
SSX2IP-208ENST00000490476 CDC42BPAQ5VT25 1732 aa6.84□□□□□ -1.31
SSX2IP-208ENST00000490476 DCCP43146 1447 aa6.84□□□□□ -1.32
SSX2IP-208ENST00000490476 NEXMIFQ5QGS0 1516 aa6.83□□□□□ -1.32
SSX2IP-208ENST00000490476 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.83□□□□□ -1.32
SSX2IP-208ENST00000490476 AGRPO00253 132 aa6.83□□□□□ -1.32
SSX2IP-208ENST00000490476 LRIG2O94898 1065 aa6.83□□□□□ -1.32
SSX2IP-208ENST00000490476 ZBTB7AO95365 584 aa6.83□□□□□ -1.32
SSX2IP-208ENST00000490476 ASMTLO95671 621 aa6.83□□□□□ -1.32
SSX2IP-208ENST00000490476 EPHX1P07099 455 aa6.83□□□□□ -1.32
SSX2IP-208ENST00000490476 IREB2P48200 963 aaKnown RBP6.83□□□□□ -1.32
SSX2IP-208ENST00000490476 SGO2Q562F6 1265 aa6.83□□□□□ -1.32
SSX2IP-208ENST00000490476 AXDND1Q5T1B0 1012 aaPredicted RBP6.83□□□□□ -1.32
SSX2IP-208ENST00000490476 DCAF15Q66K64 600 aa6.83□□□□□ -1.32
SSX2IP-208ENST00000490476 GPAT2Q6NUI2 795 aa6.83□□□□□ -1.32
SSX2IP-208ENST00000490476 CDPF1Q6NVV7 123 aa6.83□□□□□ -1.32
SSX2IP-208ENST00000490476 C16orf86Q6ZW13 317 aa6.83□□□□□ -1.32
SSX2IP-208ENST00000490476 ADAT2Q7Z6V5 191 aaKnown RBP6.83□□□□□ -1.32
SSX2IP-208ENST00000490476 CDH24Q86UP0 819 aa6.83□□□□□ -1.32
SSX2IP-208ENST00000490476 APBA2Q99767 749 aa6.83□□□□□ -1.32
SSX2IP-208ENST00000490476 HAUS7Q99871 368 aa6.83□□□□□ -1.32
SSX2IP-208ENST00000490476 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms