RNA–Protein interactions for RNA: ENST00000490447.6

YIPF3-208, Transcript of Yip1 domain family member 3, humanhuman

TSL 2

Gene YIPF3, Length 1,321 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF3-208ENST00000490447 KCNA10Q16322 511 aa21.1■□□□□ 0.97
YIPF3-208ENST00000490447 FAM160B2Q86V87 743 aa21.1■□□□□ 0.97
YIPF3-208ENST00000490447 OTUD7AQ8TE49 926 aaPredicted RBP21.1■□□□□ 0.97
YIPF3-208ENST00000490447 CHURC1Q8WUH1 139 aa21.1■□□□□ 0.97
YIPF3-208ENST00000490447 GLT1D1Q96MS3 346 aa21.1■□□□□ 0.97
YIPF3-208ENST00000490447 ACAD9Q9H845 621 aa21.1■□□□□ 0.97
YIPF3-208ENST00000490447 STX8Q9UNK0 236 aa21.1■□□□□ 0.97
YIPF3-208ENST00000490447 PCDHB15Q9Y5E8 787 aa21.1■□□□□ 0.97
YIPF3-208ENST00000490447 MROH7Q68CQ1 1323 aa21.09■□□□□ 0.97
YIPF3-208ENST00000490447 KIAA0355O15063 1070 aa21.09■□□□□ 0.97
YIPF3-208ENST00000490447 FPGSQ05932 587 aa21.09■□□□□ 0.97
YIPF3-208ENST00000490447 ARMCX2Q7L311 632 aa21.09■□□□□ 0.97
YIPF3-208ENST00000490447 ANKRD33Q7Z3H0 272 aa21.09■□□□□ 0.97
YIPF3-208ENST00000490447 PCSK9Q8NBP7 692 aaKnown RBP21.09■□□□□ 0.97
YIPF3-208ENST00000490447 KLHDC9Q8NEP7 349 aa21.09■□□□□ 0.97
YIPF3-208ENST00000490447 GMCL1Q96IK5 515 aa21.09■□□□□ 0.97
YIPF3-208ENST00000490447 RNPC3Q96LT9 517 aaKnown RBP21.09■□□□□ 0.97
YIPF3-208ENST00000490447 TOX2Q96NM4 488 aa21.09■□□□□ 0.97
YIPF3-208ENST00000490447 SMCHD1A6NHR9 2005 aa21.09■□□□□ 0.97
YIPF3-208ENST00000490447 ITGB8P26012 769 aa21.08■□□□□ 0.97
YIPF3-208ENST00000490447 CCDC144BQ3MJ40 725 aa21.08■□□□□ 0.97
YIPF3-208ENST00000490447 VTI1AQ96AJ9 217 aa21.08■□□□□ 0.97
YIPF3-208ENST00000490447 MCCP23508 829 aa21.07■□□□□ 0.96
YIPF3-208ENST00000490447 CST5P28325 142 aaPredicted RBP21.07■□□□□ 0.96
YIPF3-208ENST00000490447 FAAP100Q0VG06 881 aa21.07■□□□□ 0.96
YIPF3-208ENST00000490447 CCDC144CPQ8IYA2 1237 aa21.07■□□□□ 0.96
YIPF3-208ENST00000490447 STAG1Q8WVM7 1258 aa21.07■□□□□ 0.96
YIPF3-208ENST00000490447 CHMP4CQ96CF2 233 aa21.07■□□□□ 0.96
YIPF3-208ENST00000490447 RNF146Q9NTX7 359 aa21.07■□□□□ 0.96
YIPF3-208ENST00000490447 CDH23Q9H251 3354 aa21.07■□□□□ 0.96
YIPF3-208ENST00000490447 ELP1O95163 1332 aa21.07■□□□□ 0.96
YIPF3-208ENST00000490447 MYADML2A6NDP7 307 aa21.06■□□□□ 0.96
YIPF3-208ENST00000490447 ASGR1P07306 291 aa21.06■□□□□ 0.96
YIPF3-208ENST00000490447 CCSAPQ6IQ19 270 aaPredicted RBP21.06■□□□□ 0.96
YIPF3-208ENST00000490447 CCDC129Q6ZRS4 1044 aa21.06■□□□□ 0.96
YIPF3-208ENST00000490447 EYSQ5T1H1 3165 aa21.06■□□□□ 0.96
YIPF3-208ENST00000490447 ALAS1P13196 640 aa21.05■□□□□ 0.96
YIPF3-208ENST00000490447 GJA9P57773 515 aa21.05■□□□□ 0.96
YIPF3-208ENST00000490447 CNTN2Q02246 1040 aa21.05■□□□□ 0.96
YIPF3-208ENST00000490447 CTDSPL2Q05D32 466 aa21.05■□□□□ 0.96
YIPF3-208ENST00000490447 TKFCQ3LXA3 575 aa21.05■□□□□ 0.96
YIPF3-208ENST00000490447 KCTD1Q719H9 257 aa21.05■□□□□ 0.96
YIPF3-208ENST00000490447 PHF6Q8IWS0 365 aaKnown RBP eCLIP21.05■□□□□ 0.96
YIPF3-208ENST00000490447 FGD4Q96M96 766 aa21.05■□□□□ 0.96
YIPF3-208ENST00000490447 AGBL1Q96MI9 1066 aa21.05■□□□□ 0.96
YIPF3-208ENST00000490447 CDX2Q99626 313 aaPredicted RBP21.05■□□□□ 0.96
YIPF3-208ENST00000490447 SEMA6BQ9H3T3 888 aa21.05■□□□□ 0.96
YIPF3-208ENST00000490447 A0A0U1RQG5 324 aaPredicted RBP21.04■□□□□ 0.96
YIPF3-208ENST00000490447 ASB14A6NK59 587 aa21.04■□□□□ 0.96
YIPF3-208ENST00000490447 RANBP6O60518 1105 aaKnown RBP21.04■□□□□ 0.96
YIPF3-208ENST00000490447 GNASQ5JWF2 1037 aa21.04■□□□□ 0.96
YIPF3-208ENST00000490447 ANKRD45Q5TZF3 282 aa21.04■□□□□ 0.96
YIPF3-208ENST00000490447 CCDC174Q6PII3 467 aa21.04■□□□□ 0.96
YIPF3-208ENST00000490447 NOL8Q76FK4 1167 aaKnown RBP21.04■□□□□ 0.96
YIPF3-208ENST00000490447 EVI5LQ96CN4 794 aa21.04■□□□□ 0.96
YIPF3-208ENST00000490447 TRERF1Q96PN7 1200 aa21.04■□□□□ 0.96
YIPF3-208ENST00000490447 UPF3AQ9H1J1 476 aaKnown RBP21.04■□□□□ 0.96
YIPF3-208ENST00000490447 A1CFQ9NQ94 594 aaKnown RBP21.04■□□□□ 0.96
YIPF3-208ENST00000490447 MTMR7Q9Y216 660 aa21.04■□□□□ 0.96
YIPF3-208ENST00000490447 DDX52Q9Y2R4 599 aaKnown RBP eCLIP21.04■□□□□ 0.96
YIPF3-208ENST00000490447 ADCY6O43306 1168 aa21.04■□□□□ 0.96
YIPF3-208ENST00000490447 PLA2G6O60733 806 aa21.04■□□□□ 0.96
YIPF3-208ENST00000490447 TIMP1P01033 207 aa21.04■□□□□ 0.96
YIPF3-208ENST00000490447 RRP1P56182 461 aaKnown RBP21.04■□□□□ 0.96
YIPF3-208ENST00000490447 RCSD1Q6JBY9 416 aa21.04■□□□□ 0.96
YIPF3-208ENST00000490447 FAM133AQ8N9E0 248 aa21.04■□□□□ 0.96
YIPF3-208ENST00000490447 TOMM22Q9NS69 142 aa21.04■□□□□ 0.96
YIPF3-208ENST00000490447 ZNF536O15090 1300 aa21.03■□□□□ 0.96
YIPF3-208ENST00000490447 TLR3O15455 904 aaKnown RBP21.03■□□□□ 0.96
YIPF3-208ENST00000490447 NMT2O60551 498 aa21.03■□□□□ 0.96
YIPF3-208ENST00000490447 EPHB4P54760 987 aa21.03■□□□□ 0.96
YIPF3-208ENST00000490447 IRX5P78411 483 aaPredicted RBP21.03■□□□□ 0.96
YIPF3-208ENST00000490447 TNFAIP2Q03169 654 aa21.03■□□□□ 0.96
YIPF3-208ENST00000490447 CCDC96Q2M329 555 aa21.03■□□□□ 0.96
YIPF3-208ENST00000490447 IL17RBQ9NRM6 502 aa21.03■□□□□ 0.96
YIPF3-208ENST00000490447 SALL3Q9BXA9 1300 aa21.02■□□□□ 0.96
YIPF3-208ENST00000490447 TMEM265A0A087WTH1 108 aa21.02■□□□□ 0.95
YIPF3-208ENST00000490447 ARVCFO00192 962 aa21.02■□□□□ 0.95
YIPF3-208ENST00000490447 MFSD5Q6N075 450 aa21.02■□□□□ 0.95
YIPF3-208ENST00000490447 KATNBL1Q9H079 304 aa21.02■□□□□ 0.95
YIPF3-208ENST00000490447 INCENPQ9NQS7 918 aa21.02■□□□□ 0.95
YIPF3-208ENST00000490447 HELLSQ9NRZ9 838 aa21.02■□□□□ 0.95
YIPF3-208ENST00000490447 ANAPC4Q9UJX5 808 aa21.02■□□□□ 0.95
YIPF3-208ENST00000490447 TBX21Q9UL17 535 aa21.02■□□□□ 0.95
YIPF3-208ENST00000490447 CCPG1Q9ULG6 757 aa21.02■□□□□ 0.95
YIPF3-208ENST00000490447 PRR12Q9ULL5 1215 aa21.02■□□□□ 0.95
YIPF3-208ENST00000490447 FOXP2O15409 715 aa21.01■□□□□ 0.95
YIPF3-208ENST00000490447 SNAP25P60880 206 aa21.01■□□□□ 0.95
YIPF3-208ENST00000490447 VPS53Q5VIR6 699 aa21.01■□□□□ 0.95
YIPF3-208ENST00000490447 MAFAQ8NHW3 353 aaPredicted RBP21.01■□□□□ 0.95
YIPF3-208ENST00000490447 DCAF4Q8WV16 495 aa21.01■□□□□ 0.95
YIPF3-208ENST00000490447 TTYH1Q9H313 450 aaPredicted RBP21.01■□□□□ 0.95
YIPF3-208ENST00000490447 HSFX4A0A1B0GTS1 333 aaPredicted RBP21■□□□□ 0.95
YIPF3-208ENST00000490447 C11orf97A0A1B0GVM6 126 aaPredicted RBP21■□□□□ 0.95
YIPF3-208ENST00000490447 HSFX3A0A1B0GWH4 333 aaPredicted RBP21■□□□□ 0.95
YIPF3-208ENST00000490447 SOWAHBA6NEL2 793 aa21■□□□□ 0.95
YIPF3-208ENST00000490447 ORC4O43929 436 aa21■□□□□ 0.95
YIPF3-208ENST00000490447 FOSL2P15408 326 aa21■□□□□ 0.95
YIPF3-208ENST00000490447 CDK7P50613 346 aa21■□□□□ 0.95
YIPF3-208ENST00000490447 BEX3Q00994 111 aa21■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms