RNA–Protein interactions for RNA: ENST00000490441.1

DUBR-204, DPPA2 upstream binding RNA, humanhuman

TSL 1 (best) BASIC

Gene DUBR, Length 1,149 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DUBR-204ENST00000490441 SPC25Q9HBM1 224 aa13.32□□□□□ -0.28
DUBR-204ENST00000490441 HELLSQ9NRZ9 838 aa13.32□□□□□ -0.28
DUBR-204ENST00000490441 TOMM22Q9NS69 142 aa13.32□□□□□ -0.28
DUBR-204ENST00000490441 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.32□□□□□ -0.28
DUBR-204ENST00000490441 DNAH12Q6ZR08 3092 aa13.31□□□□□ -0.28
DUBR-204ENST00000490441 SNAI1O95863 264 aaPredicted RBP13.31□□□□□ -0.28
DUBR-204ENST00000490441 MCCP23508 829 aa13.31□□□□□ -0.28
DUBR-204ENST00000490441 MAMDC4Q6UXC1 1216 aa13.31□□□□□ -0.28
DUBR-204ENST00000490441 Q7L0L9 218 aa13.31□□□□□ -0.28
DUBR-204ENST00000490441 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.31□□□□□ -0.28
DUBR-204ENST00000490441 RASEFQ8IZ41 740 aa13.31□□□□□ -0.28
DUBR-204ENST00000490441 HS6ST3Q8IZP7 471 aa13.31□□□□□ -0.28
DUBR-204ENST00000490441 STAG1Q8WVM7 1258 aa13.31□□□□□ -0.28
DUBR-204ENST00000490441 CHMP4CQ96CF2 233 aa13.31□□□□□ -0.28
DUBR-204ENST00000490441 TSEN34Q9BSV6 310 aaKnown RBP13.31□□□□□ -0.28
DUBR-204ENST00000490441 ACAD9Q9H845 621 aa13.31□□□□□ -0.28
DUBR-204ENST00000490441 PDLIM7Q9NR12 457 aa13.31□□□□□ -0.28
DUBR-204ENST00000490441 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.31□□□□□ -0.28
DUBR-204ENST00000490441 A0A1W2PQ45 241 aaPredicted RBP13.3□□□□□ -0.28
DUBR-204ENST00000490441 A0A1W2PQY0 241 aa13.3□□□□□ -0.28
DUBR-204ENST00000490441 TRIM6-TRIM34B2RNG4 842 aa13.3□□□□□ -0.28
DUBR-204ENST00000490441 POTEB2H3BUK9 544 aa13.3□□□□□ -0.28
DUBR-204ENST00000490441 PQBP1O60828 265 aaKnown RBP13.3□□□□□ -0.28
DUBR-204ENST00000490441 CLTBP09497 229 aa13.3□□□□□ -0.28
DUBR-204ENST00000490441 TLE2Q04725 743 aa13.3□□□□□ -0.28
DUBR-204ENST00000490441 AAMPQ13685 434 aa13.3□□□□□ -0.28
DUBR-204ENST00000490441 ACVR2BQ13705 512 aa13.3□□□□□ -0.28
DUBR-204ENST00000490441 CCDC96Q2M329 555 aa13.3□□□□□ -0.28
DUBR-204ENST00000490441 TKFCQ3LXA3 575 aa13.3□□□□□ -0.28
DUBR-204ENST00000490441 MCMDC2Q4G0Z9 681 aa13.3□□□□□ -0.28
DUBR-204ENST00000490441 VPS53Q5VIR6 699 aa13.3□□□□□ -0.28
DUBR-204ENST00000490441 KCTD1Q719H9 257 aa13.3□□□□□ -0.28
DUBR-204ENST00000490441 ARMCX2Q7L311 632 aa13.3□□□□□ -0.28
DUBR-204ENST00000490441 SPRYD3Q8NCJ5 442 aa13.3□□□□□ -0.28
DUBR-204ENST00000490441 SLC17A8Q8NDX2 589 aa13.3□□□□□ -0.28
DUBR-204ENST00000490441 NUP133Q8WUM0 1156 aa13.3□□□□□ -0.28
DUBR-204ENST00000490441 ABHD16BQ9H3Z7 469 aa13.3□□□□□ -0.28
DUBR-204ENST00000490441 STARD7Q9NQZ5 370 aa13.3□□□□□ -0.28
DUBR-204ENST00000490441 RNF146Q9NTX7 359 aa13.3□□□□□ -0.28
DUBR-204ENST00000490441 ANAPC4Q9UJX5 808 aa13.3□□□□□ -0.28
DUBR-204ENST00000490441 MTMR7Q9Y216 660 aa13.3□□□□□ -0.28
DUBR-204ENST00000490441 TACC3Q9Y6A5 838 aa13.3□□□□□ -0.28
DUBR-204ENST00000490441 SYNRGQ9UMZ2 1314 aa13.3□□□□□ -0.28
DUBR-204ENST00000490441 MOXD2PA6NHM9 499 aa13.29□□□□□ -0.28
DUBR-204ENST00000490441 FOXP2O15409 715 aa13.29□□□□□ -0.28
DUBR-204ENST00000490441 ORC4O43929 436 aa13.29□□□□□ -0.28
DUBR-204ENST00000490441 NMT2O60551 498 aa13.29□□□□□ -0.28
DUBR-204ENST00000490441 PLA2G6O60733 806 aa13.29□□□□□ -0.28
DUBR-204ENST00000490441 ADAMTS4O75173 837 aa13.29□□□□□ -0.28
DUBR-204ENST00000490441 DUSP11O75319 330 aaKnown RBP13.29□□□□□ -0.28
DUBR-204ENST00000490441 ALAS1P13196 640 aa13.29□□□□□ -0.28
DUBR-204ENST00000490441 ALX1Q15699 326 aa13.29□□□□□ -0.28
DUBR-204ENST00000490441 RRP12Q5JTH9 1297 aaKnown RBP13.29□□□□□ -0.28
DUBR-204ENST00000490441 RCSD1Q6JBY9 416 aa13.29□□□□□ -0.28
DUBR-204ENST00000490441 CCDC174Q6PII3 467 aa13.29□□□□□ -0.28
DUBR-204ENST00000490441 TICAM2Q86XR7 235 aa13.29□□□□□ -0.28
DUBR-204ENST00000490441 BADQ92934 168 aa13.29□□□□□ -0.28
DUBR-204ENST00000490441 YTHDC1Q96MU7 727 aaKnown RBP13.29□□□□□ -0.28
DUBR-204ENST00000490441 LNPKQ9C0E8 428 aa13.29□□□□□ -0.28
DUBR-204ENST00000490441 INCENPQ9NQS7 918 aa13.29□□□□□ -0.28
DUBR-204ENST00000490441 IL17RBQ9NRM6 502 aa13.29□□□□□ -0.28
DUBR-204ENST00000490441 MCM3APO60318 1980 aa13.29□□□□□ -0.28
DUBR-204ENST00000490441 LTBP2Q14767 1821 aa13.28□□□□□ -0.28
DUBR-204ENST00000490441 A0A0D9SFI3 127 aa13.28□□□□□ -0.28
DUBR-204ENST00000490441 TRIM43BA6NCK2 446 aa13.28□□□□□ -0.28
DUBR-204ENST00000490441 DCDC2CA8MYV0 355 aa13.28□□□□□ -0.28
DUBR-204ENST00000490441 RIOK3O14730 519 aaKnown RBP13.28□□□□□ -0.28
DUBR-204ENST00000490441 C6orf222P0C671 652 aaPredicted RBP13.28□□□□□ -0.28
DUBR-204ENST00000490441 RAG1P15918 1043 aa13.28□□□□□ -0.28
DUBR-204ENST00000490441 ACLYP53396 1101 aa13.28□□□□□ -0.28
DUBR-204ENST00000490441 KCNA10Q16322 511 aa13.28□□□□□ -0.28
DUBR-204ENST00000490441 NOL8Q76FK4 1167 aaKnown RBP13.28□□□□□ -0.28
DUBR-204ENST00000490441 SH3RF1Q7Z6J0 888 aa13.28□□□□□ -0.28
DUBR-204ENST00000490441 CCDC144CPQ8IYA2 1237 aa13.28□□□□□ -0.28
DUBR-204ENST00000490441 PCSK9Q8NBP7 692 aaKnown RBP13.28□□□□□ -0.28
DUBR-204ENST00000490441 DCAF4Q8WV16 495 aa13.28□□□□□ -0.28
DUBR-204ENST00000490441 RILPL2Q969X0 211 aa13.28□□□□□ -0.28
DUBR-204ENST00000490441 VTI1AQ96AJ9 217 aa13.28□□□□□ -0.28
DUBR-204ENST00000490441 TRIM43Q96BQ3 446 aaPredicted RBP13.28□□□□□ -0.28
DUBR-204ENST00000490441 FAM227BQ96M60 508 aa13.28□□□□□ -0.28
DUBR-204ENST00000490441 AGBL1Q96MI9 1066 aa13.28□□□□□ -0.28
DUBR-204ENST00000490441 GLT1D1Q96MS3 346 aa13.28□□□□□ -0.28
DUBR-204ENST00000490441 TRERF1Q96PN7 1200 aa13.28□□□□□ -0.28
DUBR-204ENST00000490441 RWDD1Q9H446 243 aaPredicted RBP13.28□□□□□ -0.28
DUBR-204ENST00000490441 A1CFQ9NQ94 594 aaKnown RBP13.28□□□□□ -0.28
DUBR-204ENST00000490441 STXBP5LQ9Y2K9 1186 aa13.28□□□□□ -0.28
DUBR-204ENST00000490441 ASB14A6NK59 587 aa13.27□□□□□ -0.29
DUBR-204ENST00000490441 FGAP02671 866 aa13.27□□□□□ -0.29
DUBR-204ENST00000490441 CST5P28325 142 aaPredicted RBP13.27□□□□□ -0.29
DUBR-204ENST00000490441 MFAP1P55081 439 aaKnown RBP13.27□□□□□ -0.29
DUBR-204ENST00000490441 CNTN2Q02246 1040 aa13.27□□□□□ -0.29
DUBR-204ENST00000490441 SHHQ15465 462 aa13.27□□□□□ -0.29
DUBR-204ENST00000490441 CCDC144BQ3MJ40 725 aa13.27□□□□□ -0.29
DUBR-204ENST00000490441 ZNF697Q5TEC3 545 aa13.27□□□□□ -0.29
DUBR-204ENST00000490441 KLHDC9Q8NEP7 349 aa13.27□□□□□ -0.29
DUBR-204ENST00000490441 FGD4Q96M96 766 aa13.27□□□□□ -0.29
DUBR-204ENST00000490441 TMEM39AQ9NV64 488 aa13.27□□□□□ -0.29
DUBR-204ENST00000490441 MTMR10Q9NXD2 777 aa13.27□□□□□ -0.29
DUBR-204ENST00000490441 CCPG1Q9ULG6 757 aa13.27□□□□□ -0.29
DUBR-204ENST00000490441 PRR12Q9ULL5 1215 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms