RNA–Protein interactions for RNA: ENST00000490283.1

SEC13-218, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 740 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-218ENST00000490283 DNAJC25-GNG10A0A024R161 153 aa20.49■□□□□ 0.87
SEC13-218ENST00000490283 B4E1Z4 1266 aa20.49■□□□□ 0.87
SEC13-218ENST00000490283 RARBP10826 455 aa20.49■□□□□ 0.87
SEC13-218ENST00000490283 COL6A1P12109 1028 aa20.49■□□□□ 0.87
SEC13-218ENST00000490283 CHMLP26374 656 aa20.49■□□□□ 0.87
SEC13-218ENST00000490283 TRDNQ13061 729 aa20.49■□□□□ 0.87
SEC13-218ENST00000490283 HABP4Q5JVS0 413 aaKnown RBP20.49■□□□□ 0.87
SEC13-218ENST00000490283 ANO1Q5XXA6 986 aa20.49■□□□□ 0.87
SEC13-218ENST00000490283 CHRDL2Q6WN34 429 aa20.49■□□□□ 0.87
SEC13-218ENST00000490283 RASGRP2Q7LDG7 609 aa20.49■□□□□ 0.87
SEC13-218ENST00000490283 ZNF467Q7Z7K2 595 aaPredicted RBP20.49■□□□□ 0.87
SEC13-218ENST00000490283 TRERF1Q96PN7 1200 aa20.49■□□□□ 0.87
SEC13-218ENST00000490283 UBAC1Q9BSL1 405 aa20.49■□□□□ 0.87
SEC13-218ENST00000490283 KAT14Q9H8E8 782 aa20.49■□□□□ 0.87
SEC13-218ENST00000490283 PNMA2Q9UL42 364 aa20.49■□□□□ 0.87
SEC13-218ENST00000490283 COLQQ9Y215 455 aaPredicted RBP20.49■□□□□ 0.87
SEC13-218ENST00000490283 PFASO15067 1338 aa20.49■□□□□ 0.87
SEC13-218ENST00000490283 POTEB2H3BUK9 544 aa20.48■□□□□ 0.87
SEC13-218ENST00000490283 PDHBP11177 359 aa20.48■□□□□ 0.87
SEC13-218ENST00000490283 AKR1A1P14550 325 aa20.48■□□□□ 0.87
SEC13-218ENST00000490283 SLC16A2P36021 539 aa20.48■□□□□ 0.87
SEC13-218ENST00000490283 GPATCH4Q5T3I0 446 aaKnown RBP20.48■□□□□ 0.87
SEC13-218ENST00000490283 BTNL9Q6UXG8 535 aa20.48■□□□□ 0.87
SEC13-218ENST00000490283 ZSCAN10Q96SZ4 725 aaPredicted RBP20.48■□□□□ 0.87
SEC13-218ENST00000490283 SENP6Q9GZR1 1112 aaPredicted RBP20.48■□□□□ 0.87
SEC13-218ENST00000490283 U3KPZ7 1027 aaPredicted RBP20.48■□□□□ 0.87
SEC13-218ENST00000490283 ZNF536O15090 1300 aa20.48■□□□□ 0.87
SEC13-218ENST00000490283 ICAM1P05362 532 aa20.47■□□□□ 0.87
SEC13-218ENST00000490283 SNAP25P60880 206 aa20.47■□□□□ 0.87
SEC13-218ENST00000490283 GJC2Q5T442 439 aaPredicted RBP20.47■□□□□ 0.87
SEC13-218ENST00000490283 TTBK2Q6IQ55 1244 aa20.47■□□□□ 0.87
SEC13-218ENST00000490283 MAMDC4Q6UXC1 1216 aa20.47■□□□□ 0.87
SEC13-218ENST00000490283 CENPQQ7L2Z9 268 aaPredicted RBP20.47■□□□□ 0.87
SEC13-218ENST00000490283 RANBP17Q9H2T7 1088 aaKnown RBP20.47■□□□□ 0.87
SEC13-218ENST00000490283 XPNPEP3Q9NQH7 507 aa20.47■□□□□ 0.87
SEC13-218ENST00000490283 ZHX1Q9UKY1 873 aaPredicted RBP20.47■□□□□ 0.87
SEC13-218ENST00000490283 ZNF543Q08ER8 600 aa20.46■□□□□ 0.87
SEC13-218ENST00000490283 RNF180Q86T96 592 aa20.46■□□□□ 0.87
SEC13-218ENST00000490283 PNMA1Q8ND90 353 aa20.46■□□□□ 0.87
SEC13-218ENST00000490283 IL25Q9H293 177 aa20.46■□□□□ 0.87
SEC13-218ENST00000490283 A1CFQ9NQ94 594 aaKnown RBP20.46■□□□□ 0.87
SEC13-218ENST00000490283 FAM184BQ9ULE4 1060 aa20.46■□□□□ 0.87
SEC13-218ENST00000490283 LAMA4Q16363 1823 aa20.46■□□□□ 0.87
SEC13-218ENST00000490283 ZSWIM5Q9P217 1185 aa20.45■□□□□ 0.86
SEC13-218ENST00000490283 TNKSO95271 1327 aa20.45■□□□□ 0.86
SEC13-218ENST00000490283 SGSM2O43147 1006 aa20.44■□□□□ 0.86
SEC13-218ENST00000490283 ZNF865P0CJ78 1059 aaPredicted RBP20.44■□□□□ 0.86
SEC13-218ENST00000490283 SNHG28P0DPA3 235 aa20.44■□□□□ 0.86
SEC13-218ENST00000490283 TAL1P17542 331 aaPredicted RBP20.44■□□□□ 0.86
SEC13-218ENST00000490283 NSMFQ6X4W1 530 aa20.44■□□□□ 0.86
SEC13-218ENST00000490283 KIAA1211Q6ZU35 1233 aa20.44■□□□□ 0.86
SEC13-218ENST00000490283 RALYLQ86SE5 291 aaKnown RBP20.44■□□□□ 0.86
SEC13-218ENST00000490283 ABHD16BQ9H3Z7 469 aa20.44■□□□□ 0.86
SEC13-218ENST00000490283 CDKN2AIPQ9NXV6 580 aaPredicted RBP20.44■□□□□ 0.86
SEC13-218ENST00000490283 ZMYND8Q9ULU4 1186 aaPredicted RBP20.44■□□□□ 0.86
SEC13-218ENST00000490283 ZNFX1Q9P2E3 1918 aaKnown RBP20.43■□□□□ 0.86
SEC13-218ENST00000490283 ASB14A6NK59 587 aa20.43■□□□□ 0.86
SEC13-218ENST00000490283 SNAI1O95863 264 aaPredicted RBP20.43■□□□□ 0.86
SEC13-218ENST00000490283 CNTN2Q02246 1040 aa20.43■□□□□ 0.86
SEC13-218ENST00000490283 ACVR2BQ13705 512 aa20.43■□□□□ 0.86
SEC13-218ENST00000490283 LRRC41Q15345 812 aa20.43■□□□□ 0.86
SEC13-218ENST00000490283 LRRC26Q2I0M4 334 aa20.43■□□□□ 0.86
SEC13-218ENST00000490283 ASPRV1Q53RT3 343 aa20.43■□□□□ 0.86
SEC13-218ENST00000490283 IFIT1BQ5T764 474 aaKnown RBP20.43■□□□□ 0.86
SEC13-218ENST00000490283 ARMCX2Q7L311 632 aa20.43■□□□□ 0.86
SEC13-218ENST00000490283 ENAHQ8N8S7 591 aaPredicted RBP20.43■□□□□ 0.86
SEC13-218ENST00000490283 FAM133AQ8N9E0 248 aa20.43■□□□□ 0.86
SEC13-218ENST00000490283 ANKS1AQ92625 1134 aa20.43■□□□□ 0.86
SEC13-218ENST00000490283 CEP290O15078 2479 aa20.43■□□□□ 0.86
SEC13-218ENST00000490283 FRMPD3Q5JV73 1810 aa20.42■□□□□ 0.86
SEC13-218ENST00000490283 PLXNA1Q9UIW2 1896 aa20.42■□□□□ 0.86
SEC13-218ENST00000490283 ERICH2A1L162 156 aa20.42■□□□□ 0.86
SEC13-218ENST00000490283 SLC34A2O95436 690 aa20.42■□□□□ 0.86
SEC13-218ENST00000490283 ATN1P54259 1190 aaPredicted RBP20.42■□□□□ 0.86
SEC13-218ENST00000490283 PTH1RQ03431 593 aa20.42■□□□□ 0.86
SEC13-218ENST00000490283 MUM1L1Q5H9M0 696 aa20.42■□□□□ 0.86
SEC13-218ENST00000490283 CCDC144CPQ8IYA2 1237 aa20.42■□□□□ 0.86
SEC13-218ENST00000490283 SPC25Q9HBM1 224 aa20.42■□□□□ 0.86
SEC13-218ENST00000490283 CYP39A1Q9NYL5 469 aa20.42■□□□□ 0.86
SEC13-218ENST00000490283 DHX16O60231 1041 aaKnown RBP20.41■□□□□ 0.86
SEC13-218ENST00000490283 GOLGA8HP0CJ92 632 aa20.41■□□□□ 0.86
SEC13-218ENST00000490283 SYN1P17600 705 aa20.41■□□□□ 0.86
SEC13-218ENST00000490283 SART3Q15020 963 aaKnown RBP20.41■□□□□ 0.86
SEC13-218ENST00000490283 RBM27Q9P2N5 1060 aaKnown RBP20.41■□□□□ 0.86
SEC13-218ENST00000490283 ADD3Q9UEY8 706 aaKnown RBP20.41■□□□□ 0.86
SEC13-218ENST00000490283 PRKAG2Q9UGJ0 569 aa20.41■□□□□ 0.86
SEC13-218ENST00000490283 WDR19Q8NEZ3 1342 aa20.41■□□□□ 0.86
SEC13-218ENST00000490283 PGK1P00558 417 aa20.4■□□□□ 0.86
SEC13-218ENST00000490283 CYP21A2P08686 494 aa20.4■□□□□ 0.86
SEC13-218ENST00000490283 PARP1P09874 1014 aaKnown RBP20.4■□□□□ 0.86
SEC13-218ENST00000490283 ADCYAP1R1P41586 468 aa20.4■□□□□ 0.86
SEC13-218ENST00000490283 NCOA7Q8NI08 942 aa20.4■□□□□ 0.86
SEC13-218ENST00000490283 FGD4Q96M96 766 aa20.4■□□□□ 0.86
SEC13-218ENST00000490283 PTPDC1A2A3K4 754 aa20.39■□□□□ 0.85
SEC13-218ENST00000490283 DUSP11O75319 330 aaKnown RBP20.39■□□□□ 0.85
SEC13-218ENST00000490283 RTP1P59025 263 aa20.39■□□□□ 0.85
SEC13-218ENST00000490283 MPHOSPH6Q99547 160 aaKnown RBP20.39■□□□□ 0.85
SEC13-218ENST00000490283 UBA5Q9GZZ9 404 aa20.39■□□□□ 0.85
SEC13-218ENST00000490283 ATP11BQ9Y2G3 1177 aa20.39■□□□□ 0.85
SEC13-218ENST00000490283 A0A1W2PPC1 479 aa20.38■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 306.5 ms