RNA–Protein interactions for RNA: ENST00000490035.6

LSAMP-205, Transcript of limbic system associated membrane protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSAMP, Length 9,446 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-205ENST00000490035 LRRC8AQ8IWT6 810 aa9.7□□□□□ -0.86
LSAMP-205ENST00000490035 RNF26Q9BY78 433 aaPredicted RBP9.7□□□□□ -0.86
LSAMP-205ENST00000490035 CCNL1Q9UK58 526 aaPredicted RBP9.7□□□□□ -0.86
LSAMP-205ENST00000490035 SMCO2A6NFE2 343 aa9.7□□□□□ -0.86
LSAMP-205ENST00000490035 STAM2O75886 525 aa9.7□□□□□ -0.86
LSAMP-205ENST00000490035 RNF8O76064 485 aa9.7□□□□□ -0.86
LSAMP-205ENST00000490035 GABPAQ06546 454 aa9.7□□□□□ -0.86
LSAMP-205ENST00000490035 PPARAQ07869 468 aa9.7□□□□□ -0.86
LSAMP-205ENST00000490035 FAM89AQ96GI7 184 aa9.7□□□□□ -0.86
LSAMP-205ENST00000490035 AATFQ9NY61 560 aaKnown RBP eCLIP9.7□□□□□ -0.86
LSAMP-205ENST00000490035 ABCC12Q96J65 1359 aa9.7□□□□□ -0.86
LSAMP-205ENST00000490035 PLEKHG3A1L390 1219 aa9.7□□□□□ -0.86
LSAMP-205ENST00000490035 TNNI1P19237 187 aa9.7□□□□□ -0.86
LSAMP-205ENST00000490035 PSMD2Q13200 908 aa9.7□□□□□ -0.86
LSAMP-205ENST00000490035 ARHGEF6Q15052 776 aa9.7□□□□□ -0.86
LSAMP-205ENST00000490035 SURF1Q15526 300 aa9.7□□□□□ -0.86
LSAMP-205ENST00000490035 TRIM50Q86XT4 487 aa9.7□□□□□ -0.86
LSAMP-205ENST00000490035 CCDC170Q8IYT3 715 aa9.7□□□□□ -0.86
LSAMP-205ENST00000490035 KRIT1O00522 736 aa9.69□□□□□ -0.86
LSAMP-205ENST00000490035 RRAGAQ7L523 313 aa9.69□□□□□ -0.86
LSAMP-205ENST00000490035 PODNQ7Z5L7 613 aa9.69□□□□□ -0.86
LSAMP-205ENST00000490035 ADCY9O60503 1353 aa9.69□□□□□ -0.86
LSAMP-205ENST00000490035 UBAP1LF5GYI3 381 aa9.69□□□□□ -0.86
LSAMP-205ENST00000490035 BBS5Q8N3I7 341 aa9.69□□□□□ -0.86
LSAMP-205ENST00000490035 JARID2Q92833 1246 aaPredicted RBP9.69□□□□□ -0.86
LSAMP-205ENST00000490035 STAP2Q9UGK3 403 aa9.69□□□□□ -0.86
LSAMP-205ENST00000490035 SUN1O94901 812 aa9.69□□□□□ -0.86
LSAMP-205ENST00000490035 YARSP54577 528 aaKnown RBP9.69□□□□□ -0.86
LSAMP-205ENST00000490035 TCIRG1Q13488 830 aa9.69□□□□□ -0.86
LSAMP-205ENST00000490035 FAM160B1Q5W0V3 765 aa9.69□□□□□ -0.86
LSAMP-205ENST00000490035 SUDS3Q9H7L9 328 aaPredicted RBP9.69□□□□□ -0.86
LSAMP-205ENST00000490035 YEATS2Q9ULM3 1422 aa9.69□□□□□ -0.86
LSAMP-205ENST00000490035 NIM1KQ8IY84 436 aa9.69□□□□□ -0.86
LSAMP-205ENST00000490035 CCDC124Q96CT7 223 aaKnown RBP9.69□□□□□ -0.86
LSAMP-205ENST00000490035 PBKQ96KB5 322 aa9.69□□□□□ -0.86
LSAMP-205ENST00000490035 TEKT3Q9BXF9 490 aa9.69□□□□□ -0.86
LSAMP-205ENST00000490035 OSBPL3Q9H4L5 887 aa9.69□□□□□ -0.86
LSAMP-205ENST00000490035 PANK4Q9NVE7 773 aa9.69□□□□□ -0.86
LSAMP-205ENST00000490035 USP19O94966 1318 aa9.69□□□□□ -0.86
LSAMP-205ENST00000490035 ETF1P62495 437 aaKnown RBP9.69□□□□□ -0.86
LSAMP-205ENST00000490035 MTX1Q13505 466 aa9.69□□□□□ -0.86
LSAMP-205ENST00000490035 FAM178BQ8IXR5 827 aa9.69□□□□□ -0.86
LSAMP-205ENST00000490035 C8orf37Q96NL8 207 aa9.69□□□□□ -0.86
LSAMP-205ENST00000490035 DBNDD2Q9BQY9 259 aa9.69□□□□□ -0.86
LSAMP-205ENST00000490035 PSTPIP2Q9H939 334 aa9.69□□□□□ -0.86
LSAMP-205ENST00000490035 BAG5Q9UL15 447 aa9.69□□□□□ -0.86
LSAMP-205ENST00000490035 DIS3Q9Y2L1 958 aaKnown RBP9.69□□□□□ -0.86
LSAMP-205ENST00000490035 MID2Q9UJV3 735 aa9.69□□□□□ -0.86
LSAMP-205ENST00000490035 TRIM35Q9UPQ4 493 aa9.69□□□□□ -0.86
LSAMP-205ENST00000490035 PTPREP23469 700 aa9.68□□□□□ -0.86
LSAMP-205ENST00000490035 CLNS1AP54105 237 aaKnown RBP9.68□□□□□ -0.86
LSAMP-205ENST00000490035 RSPH3Q86UC2 560 aa9.68□□□□□ -0.86
LSAMP-205ENST00000490035 POLR3EQ9NVU0 708 aa9.68□□□□□ -0.86
LSAMP-205ENST00000490035 EFCAB6Q5THR3 1501 aa9.68□□□□□ -0.86
LSAMP-205ENST00000490035 MAGI2Q86UL8 1455 aa9.68□□□□□ -0.86
LSAMP-205ENST00000490035 TTI1O43156 1089 aa9.68□□□□□ -0.86
LSAMP-205ENST00000490035 SCG2P13521 617 aa9.68□□□□□ -0.86
LSAMP-205ENST00000490035 EIF3BP55884 814 aaKnown RBP9.68□□□□□ -0.86
LSAMP-205ENST00000490035 HESX1Q9UBX0 185 aa9.68□□□□□ -0.86
LSAMP-205ENST00000490035 POLR2MP0CAP2 368 aa9.68□□□□□ -0.86
LSAMP-205ENST00000490035 OAS2P29728 719 aaKnown RBP9.68□□□□□ -0.86
LSAMP-205ENST00000490035 ZBTB17Q13105 803 aa9.68□□□□□ -0.86
LSAMP-205ENST00000490035 MIER3Q7Z3K6 550 aa9.68□□□□□ -0.86
LSAMP-205ENST00000490035 HECW2Q9P2P5 1572 aa9.68□□□□□ -0.86
LSAMP-205ENST00000490035 REREQ9P2R6 1566 aa9.68□□□□□ -0.86
LSAMP-205ENST00000490035 ADGRL3Q9HAR2 1447 aa9.68□□□□□ -0.86
LSAMP-205ENST00000490035 KRT10P13645 584 aa9.68□□□□□ -0.86
LSAMP-205ENST00000490035 IL9RQ01113 521 aa9.68□□□□□ -0.86
LSAMP-205ENST00000490035 TFDP1Q14186 410 aa9.68□□□□□ -0.86
LSAMP-205ENST00000490035 BZW1Q7L1Q6 419 aaKnown RBP9.68□□□□□ -0.86
LSAMP-205ENST00000490035 TMEM206Q9H813 350 aa9.68□□□□□ -0.86
LSAMP-205ENST00000490035 LEMD3Q9Y2U8 911 aa9.68□□□□□ -0.86
LSAMP-205ENST00000490035 AFG3L2Q9Y4W6 797 aa9.68□□□□□ -0.86
LSAMP-205ENST00000490035 RXRAP19793 462 aa9.68□□□□□ -0.86
LSAMP-205ENST00000490035 LIG4P49917 911 aa9.68□□□□□ -0.86
LSAMP-205ENST00000490035 PTK2Q05397 1052 aa9.68□□□□□ -0.86
LSAMP-205ENST00000490035 ORC2Q13416 577 aaPredicted RBP9.68□□□□□ -0.86
LSAMP-205ENST00000490035 SLMAPQ14BN4 828 aa9.68□□□□□ -0.86
LSAMP-205ENST00000490035 CCDC68Q9H2F9 335 aa9.68□□□□□ -0.86
LSAMP-205ENST00000490035 CSADQ9Y600 493 aa9.68□□□□□ -0.86
LSAMP-205ENST00000490035 NFKBIAP25963 317 aa9.68□□□□□ -0.86
LSAMP-205ENST00000490035 ELF2Q15723 593 aa9.68□□□□□ -0.86
LSAMP-205ENST00000490035 ARHGEF16Q5VV41 709 aa9.68□□□□□ -0.86
LSAMP-205ENST00000490035 GBP5Q96PP8 586 aa9.68□□□□□ -0.86
LSAMP-205ENST00000490035 EIF2AQ9BY44 585 aaKnown RBP9.68□□□□□ -0.86
LSAMP-205ENST00000490035 DDX25Q9UHL0 483 aaKnown RBP9.68□□□□□ -0.86
LSAMP-205ENST00000490035 MUM1Q2TAK8 710 aa9.68□□□□□ -0.86
LSAMP-205ENST00000490035 CDC42BPGQ6DT37 1551 aa9.68□□□□□ -0.86
LSAMP-205ENST00000490035 TFAP4Q01664 338 aa9.68□□□□□ -0.86
LSAMP-205ENST00000490035 LSM14BQ9BX40 385 aaKnown RBP9.68□□□□□ -0.86
LSAMP-205ENST00000490035 MRPL47Q9HD33 250 aaKnown RBP9.68□□□□□ -0.86
LSAMP-205ENST00000490035 LMTK3Q96Q04 1460 aa9.67□□□□□ -0.86
LSAMP-205ENST00000490035 TYW5A2RUC4 315 aaKnown RBP9.67□□□□□ -0.86
LSAMP-205ENST00000490035 DLGAP5Q15398 846 aa9.67□□□□□ -0.86
LSAMP-205ENST00000490035 TYW1BQ6NUM6 668 aa9.67□□□□□ -0.86
LSAMP-205ENST00000490035 SEPT14Q6ZU15 432 aa9.67□□□□□ -0.86
LSAMP-205ENST00000490035 FANCBQ8NB91 859 aa9.67□□□□□ -0.86
LSAMP-205ENST00000490035 EFHD1Q9BUP0 239 aa9.67□□□□□ -0.86
LSAMP-205ENST00000490035 XPO4Q9C0E2 1151 aaKnown RBP9.67□□□□□ -0.86
LSAMP-205ENST00000490035 SAP30BPQ9UHR5 308 aaKnown RBP9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms