RNA–Protein interactions for RNA: ENST00000489719.1

ABCF3-217, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 4

Gene ABCF3, Length 569 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-217ENST00000489719 DHX30Q7L2E3 1194 aaKnown RBP eCLIP20.94■□□□□ 0.94
ABCF3-217ENST00000489719 RASGRP2Q7LDG7 609 aa20.94■□□□□ 0.94
ABCF3-217ENST00000489719 ZSCAN10Q96SZ4 725 aaPredicted RBP20.94■□□□□ 0.94
ABCF3-217ENST00000489719 KAT14Q9H8E8 782 aa20.94■□□□□ 0.94
ABCF3-217ENST00000489719 RNF146Q9NTX7 359 aa20.94■□□□□ 0.94
ABCF3-217ENST00000489719 U3KPZ7 1027 aaPredicted RBP20.94■□□□□ 0.94
ABCF3-217ENST00000489719 A0A0G2JMZ2 1700 aa20.94■□□□□ 0.94
ABCF3-217ENST00000489719 PDHBP11177 359 aa20.93■□□□□ 0.94
ABCF3-217ENST00000489719 UBAC1Q9BSL1 405 aa20.93■□□□□ 0.94
ABCF3-217ENST00000489719 CCPG1Q9ULG6 757 aa20.93■□□□□ 0.94
ABCF3-217ENST00000489719 ZNF536O15090 1300 aa20.93■□□□□ 0.94
ABCF3-217ENST00000489719 POTEB2H3BUK9 544 aa20.92■□□□□ 0.94
ABCF3-217ENST00000489719 SGSM2O43147 1006 aa20.92■□□□□ 0.94
ABCF3-217ENST00000489719 MYCNP04198 464 aaPredicted RBP20.92■□□□□ 0.94
ABCF3-217ENST00000489719 PTH1RQ03431 593 aa20.92■□□□□ 0.94
ABCF3-217ENST00000489719 ZNF543Q08ER8 600 aa20.92■□□□□ 0.94
ABCF3-217ENST00000489719 GPATCH4Q5T3I0 446 aaKnown RBP20.92■□□□□ 0.94
ABCF3-217ENST00000489719 KIAA1211Q6ZU35 1233 aa20.92■□□□□ 0.94
ABCF3-217ENST00000489719 ZNF467Q7Z7K2 595 aaPredicted RBP20.92■□□□□ 0.94
ABCF3-217ENST00000489719 ANKS1AQ92625 1134 aa20.92■□□□□ 0.94
ABCF3-217ENST00000489719 SENP6Q9GZR1 1112 aaPredicted RBP20.92■□□□□ 0.94
ABCF3-217ENST00000489719 PNMA2Q9UL42 364 aa20.92■□□□□ 0.94
ABCF3-217ENST00000489719 DNM1LO00429 736 aa20.91■□□□□ 0.94
ABCF3-217ENST00000489719 ICAM1P05362 532 aa20.91■□□□□ 0.94
ABCF3-217ENST00000489719 RARBP10826 455 aa20.91■□□□□ 0.94
ABCF3-217ENST00000489719 COL6A1P12109 1028 aa20.91■□□□□ 0.94
ABCF3-217ENST00000489719 GJC2Q5T442 439 aaPredicted RBP20.91■□□□□ 0.94
ABCF3-217ENST00000489719 MAMDC4Q6UXC1 1216 aa20.91■□□□□ 0.94
ABCF3-217ENST00000489719 PNMA1Q8ND90 353 aa20.91■□□□□ 0.94
ABCF3-217ENST00000489719 SYNGAP1Q96PV0 1343 aa20.91■□□□□ 0.94
ABCF3-217ENST00000489719 RANBP17Q9H2T7 1088 aaKnown RBP20.91■□□□□ 0.94
ABCF3-217ENST00000489719 MYH4Q9Y623 1939 aa20.9■□□□□ 0.94
ABCF3-217ENST00000489719 KBTBD13C9JR72 458 aa20.9■□□□□ 0.94
ABCF3-217ENST00000489719 SNHG28P0DPA3 235 aa20.9■□□□□ 0.94
ABCF3-217ENST00000489719 TAL1P17542 331 aaPredicted RBP20.9■□□□□ 0.94
ABCF3-217ENST00000489719 C7orf61Q8IZ16 206 aa20.9■□□□□ 0.94
ABCF3-217ENST00000489719 FAM184BQ9ULE4 1060 aa20.9■□□□□ 0.94
ABCF3-217ENST00000489719 COLQQ9Y215 455 aaPredicted RBP20.9■□□□□ 0.94
ABCF3-217ENST00000489719 PFASO15067 1338 aa20.89■□□□□ 0.93
ABCF3-217ENST00000489719 TNKSO95271 1327 aa20.89■□□□□ 0.93
ABCF3-217ENST00000489719 SNAI1O95863 264 aaPredicted RBP20.89■□□□□ 0.93
ABCF3-217ENST00000489719 ZNF865P0CJ78 1059 aaPredicted RBP20.89■□□□□ 0.93
ABCF3-217ENST00000489719 AKR1A1P14550 325 aa20.89■□□□□ 0.93
ABCF3-217ENST00000489719 HABP4Q5JVS0 413 aaKnown RBP20.89■□□□□ 0.93
ABCF3-217ENST00000489719 ENAHQ8N8S7 591 aaPredicted RBP20.89■□□□□ 0.93
ABCF3-217ENST00000489719 A1CFQ9NQ94 594 aaKnown RBP20.89■□□□□ 0.93
ABCF3-217ENST00000489719 ZHX1Q9UKY1 873 aaPredicted RBP20.89■□□□□ 0.93
ABCF3-217ENST00000489719 ZNF236Q9UL36 1845 aa20.89■□□□□ 0.93
ABCF3-217ENST00000489719 CYP21A2P08686 494 aa20.88■□□□□ 0.93
ABCF3-217ENST00000489719 GOLGA8HP0CJ92 632 aa20.88■□□□□ 0.93
ABCF3-217ENST00000489719 CNTN2Q02246 1040 aa20.88■□□□□ 0.93
ABCF3-217ENST00000489719 ACVR2BQ13705 512 aa20.88■□□□□ 0.93
ABCF3-217ENST00000489719 MUM1L1Q5H9M0 696 aa20.88■□□□□ 0.93
ABCF3-217ENST00000489719 IFIT1BQ5T764 474 aaKnown RBP20.88■□□□□ 0.93
ABCF3-217ENST00000489719 CHRDL2Q6WN34 429 aa20.88■□□□□ 0.93
ABCF3-217ENST00000489719 NSMFQ6X4W1 530 aa20.88■□□□□ 0.93
ABCF3-217ENST00000489719 MAP4K1Q92918 833 aa20.88■□□□□ 0.93
ABCF3-217ENST00000489719 UBA5Q9GZZ9 404 aa20.88■□□□□ 0.93
ABCF3-217ENST00000489719 ABHD16BQ9H3Z7 469 aa20.88■□□□□ 0.93
ABCF3-217ENST00000489719 XPNPEP3Q9NQH7 507 aa20.88■□□□□ 0.93
ABCF3-217ENST00000489719 CDKN2AIPQ9NXV6 580 aaPredicted RBP20.88■□□□□ 0.93
ABCF3-217ENST00000489719 ASB14A6NK59 587 aa20.87■□□□□ 0.93
ABCF3-217ENST00000489719 RALYLQ86SE5 291 aaKnown RBP20.87■□□□□ 0.93
ABCF3-217ENST00000489719 RNF180Q86T96 592 aa20.87■□□□□ 0.93
ABCF3-217ENST00000489719 FAM133AQ8N9E0 248 aa20.87■□□□□ 0.93
ABCF3-217ENST00000489719 CCDC136Q96JN2 1154 aa20.87■□□□□ 0.93
ABCF3-217ENST00000489719 PARP14Q460N5 1801 aa20.86■□□□□ 0.93
ABCF3-217ENST00000489719 ERICH2A1L162 156 aa20.86■□□□□ 0.93
ABCF3-217ENST00000489719 PARP1P09874 1014 aaKnown RBP20.86■□□□□ 0.93
ABCF3-217ENST00000489719 ATN1P54259 1190 aaPredicted RBP20.86■□□□□ 0.93
ABCF3-217ENST00000489719 LRRC41Q15345 812 aa20.86■□□□□ 0.93
ABCF3-217ENST00000489719 LRRC26Q2I0M4 334 aa20.86■□□□□ 0.93
ABCF3-217ENST00000489719 ASPRV1Q53RT3 343 aa20.86■□□□□ 0.93
ABCF3-217ENST00000489719 ARMCX2Q7L311 632 aa20.86■□□□□ 0.93
ABCF3-217ENST00000489719 CCDC144CPQ8IYA2 1237 aa20.86■□□□□ 0.93
ABCF3-217ENST00000489719 NCOA7Q8NI08 942 aa20.86■□□□□ 0.93
ABCF3-217ENST00000489719 CYP39A1Q9NYL5 469 aa20.86■□□□□ 0.93
ABCF3-217ENST00000489719 COL11A1P12107 1806 aaPredicted RBP20.85■□□□□ 0.93
ABCF3-217ENST00000489719 SOWAHBA6NEL2 793 aa20.85■□□□□ 0.93
ABCF3-217ENST00000489719 E7EWF7 191 aa20.85■□□□□ 0.93
ABCF3-217ENST00000489719 CYB5R4Q7L1T6 521 aa20.85■□□□□ 0.93
ABCF3-217ENST00000489719 ZMYND8Q9ULU4 1186 aaPredicted RBP20.85■□□□□ 0.93
ABCF3-217ENST00000489719 RBM8AQ9Y5S9 174 aaKnown RBP20.85■□□□□ 0.93
ABCF3-217ENST00000489719 IFIT3O14879 490 aaKnown RBP20.84■□□□□ 0.93
ABCF3-217ENST00000489719 DHX16O60231 1041 aaKnown RBP20.84■□□□□ 0.93
ABCF3-217ENST00000489719 PGK1P00558 417 aa20.84■□□□□ 0.93
ABCF3-217ENST00000489719 ADCYAP1R1P41586 468 aa20.84■□□□□ 0.93
ABCF3-217ENST00000489719 BAATQ14032 418 aaPredicted RBP20.84■□□□□ 0.93
ABCF3-217ENST00000489719 SART3Q15020 963 aaKnown RBP20.84■□□□□ 0.93
ABCF3-217ENST00000489719 BMP2KLQ5H9B9 411 aa20.84■□□□□ 0.93
ABCF3-217ENST00000489719 FGD4Q96M96 766 aa20.84■□□□□ 0.93
ABCF3-217ENST00000489719 VAT1LQ9HCJ6 419 aa20.84■□□□□ 0.93
ABCF3-217ENST00000489719 PTPDC1A2A3K4 754 aa20.83■□□□□ 0.93
ABCF3-217ENST00000489719 NEFLP07196 543 aa20.83■□□□□ 0.93
ABCF3-217ENST00000489719 SEC23AQ15436 765 aa20.83■□□□□ 0.93
ABCF3-217ENST00000489719 CCDC144BQ3MJ40 725 aa20.83■□□□□ 0.93
ABCF3-217ENST00000489719 SLC39A5Q6ZMH5 540 aa20.83■□□□□ 0.93
ABCF3-217ENST00000489719 FERMT2Q96AC1 680 aa20.83■□□□□ 0.93
ABCF3-217ENST00000489719 ESYT1Q9BSJ8 1104 aa20.83■□□□□ 0.93
ABCF3-217ENST00000489719 CPVLQ9H3G5 476 aa20.83■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 89.7 ms