RNA–Protein interactions for RNA: ENST00000489707.5

PTK7-216, Transcript of protein tyrosine kinase 7 (inactive), humanhuman

TSL 1 (best)

Gene PTK7, Length 1,935 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTK7-216ENST00000489707 ZSCAN12O43309 604 aa17.52■□□□□ 0.4
PTK7-216ENST00000489707 SYCP1Q15431 976 aa17.52■□□□□ 0.4
PTK7-216ENST00000489707 KLHL10Q6JEL2 608 aa17.52■□□□□ 0.4
PTK7-216ENST00000489707 CDC42EP5Q6NZY7 148 aa17.52■□□□□ 0.4
PTK7-216ENST00000489707 ZNF622Q969S3 477 aaKnown RBP eCLIP17.52■□□□□ 0.4
PTK7-216ENST00000489707 ZDHHC15Q96MV8 337 aa17.52■□□□□ 0.4
PTK7-216ENST00000489707 PIGSQ96S52 555 aa17.52■□□□□ 0.4
PTK7-216ENST00000489707 TMX1Q9H3N1 280 aa17.52■□□□□ 0.4
PTK7-216ENST00000489707 RWDD2AQ9UIY3 292 aa17.52■□□□□ 0.4
PTK7-216ENST00000489707 PPP1R3GB7ZBB8 358 aa17.51■□□□□ 0.39
PTK7-216ENST00000489707 ADAMTS3O15072 1205 aa17.51■□□□□ 0.39
PTK7-216ENST00000489707 RPN1P04843 607 aaKnown RBP17.51■□□□□ 0.39
PTK7-216ENST00000489707 AKR1B1P15121 316 aa17.51■□□□□ 0.39
PTK7-216ENST00000489707 ADCY7P51828 1080 aa17.51■□□□□ 0.39
PTK7-216ENST00000489707 TBX2Q13207 712 aaPredicted RBP17.51■□□□□ 0.39
PTK7-216ENST00000489707 STIM1Q13586 685 aa17.51■□□□□ 0.39
PTK7-216ENST00000489707 KCNB1Q14721 858 aa17.51■□□□□ 0.39
PTK7-216ENST00000489707 UTP14CQ5TAP6 766 aaKnown RBP17.51■□□□□ 0.39
PTK7-216ENST00000489707 STRIP1Q5VSL9 837 aa17.51■□□□□ 0.39
PTK7-216ENST00000489707 CDKAL1Q5VV42 579 aa17.51■□□□□ 0.39
PTK7-216ENST00000489707 SAMSN1Q9NSI8 373 aaKnown RBP17.51■□□□□ 0.39
PTK7-216ENST00000489707 TRMT1Q9NXH9 659 aaKnown RBP17.51■□□□□ 0.39
PTK7-216ENST00000489707 GOLGA6L9A6NEM1 432 aa17.51■□□□□ 0.39
PTK7-216ENST00000489707 CTIFO43310 598 aaKnown RBP17.51■□□□□ 0.39
PTK7-216ENST00000489707 STX10O60499 249 aa17.51■□□□□ 0.39
PTK7-216ENST00000489707 CCNT1O60563 726 aaKnown RBP17.51■□□□□ 0.39
PTK7-216ENST00000489707 CRKP46108 304 aa17.51■□□□□ 0.39
PTK7-216ENST00000489707 PAK1Q13153 545 aa17.51■□□□□ 0.39
PTK7-216ENST00000489707 NR1I3Q14994 352 aa17.51■□□□□ 0.39
PTK7-216ENST00000489707 LETM2Q2VYF4 491 aa17.51■□□□□ 0.39
PTK7-216ENST00000489707 E4F1Q66K89 784 aaPredicted RBP17.51■□□□□ 0.39
PTK7-216ENST00000489707 C2CD5Q86YS7 1000 aa17.51■□□□□ 0.39
PTK7-216ENST00000489707 VAT1LQ9HCJ6 419 aa17.51■□□□□ 0.39
PTK7-216ENST00000489707 DDX4Q9NQI0 724 aaKnown RBP17.51■□□□□ 0.39
PTK7-216ENST00000489707 USP27XA6NNY8 438 aa17.5■□□□□ 0.39
PTK7-216ENST00000489707 TMEM232C9JQI7 657 aa17.5■□□□□ 0.39
PTK7-216ENST00000489707 NPM3O75607 178 aaKnown RBP17.5■□□□□ 0.39
PTK7-216ENST00000489707 SCNN1DP51172 638 aa17.5■□□□□ 0.39
PTK7-216ENST00000489707 KARSQ15046 597 aaKnown RBP17.5■□□□□ 0.39
PTK7-216ENST00000489707 ZNF592Q92610 1267 aa17.5■□□□□ 0.39
PTK7-216ENST00000489707 PPP1R13BQ96KQ4 1090 aa17.5■□□□□ 0.39
PTK7-216ENST00000489707 RAB34Q9BZG1 259 aa17.5■□□□□ 0.39
PTK7-216ENST00000489707 GLT8D2Q9H1C3 349 aa17.5■□□□□ 0.39
PTK7-216ENST00000489707 INTS13Q9NVM9 706 aa17.5■□□□□ 0.39
PTK7-216ENST00000489707 ADAMTSL1Q8N6G6 1762 aa17.49■□□□□ 0.39
PTK7-216ENST00000489707 PNMA6FA0A0J9YX94 578 aa17.49■□□□□ 0.39
PTK7-216ENST00000489707 TPM1P09493 284 aa17.49■□□□□ 0.39
PTK7-216ENST00000489707 CD44P16070 742 aaKnown RBP17.49■□□□□ 0.39
PTK7-216ENST00000489707 PPP1R2P41236 205 aa17.49■□□□□ 0.39
PTK7-216ENST00000489707 AMPD3Q01432 767 aa17.49■□□□□ 0.39
PTK7-216ENST00000489707 ZNF543Q08ER8 600 aa17.49■□□□□ 0.39
PTK7-216ENST00000489707 APOBEC3HQ6NTF7 200 aaKnown RBP17.49■□□□□ 0.39
PTK7-216ENST00000489707 CNKSR1Q969H4 720 aa17.49■□□□□ 0.39
PTK7-216ENST00000489707 BLZF1Q9H2G9 400 aa17.49■□□□□ 0.39
PTK7-216ENST00000489707 TMEM60Q9H2L4 133 aa17.49■□□□□ 0.39
PTK7-216ENST00000489707 CTNND2Q9UQB3 1225 aa17.49■□□□□ 0.39
PTK7-216ENST00000489707 TNS1Q9HBL0 1735 aaKnown RBP17.49■□□□□ 0.39
PTK7-216ENST00000489707 SHMT1P34896 483 aa17.49■□□□□ 0.39
PTK7-216ENST00000489707 TMEM266Q2M3C6 531 aa17.49■□□□□ 0.39
PTK7-216ENST00000489707 HSP90AA4PQ58FG1 418 aa17.49■□□□□ 0.39
PTK7-216ENST00000489707 CC2D2BQ6DHV5 1058 aa17.49■□□□□ 0.39
PTK7-216ENST00000489707 CABP7Q86V35 215 aa17.49■□□□□ 0.39
PTK7-216ENST00000489707 PPFIBP1Q86W92 1011 aa17.49■□□□□ 0.39
PTK7-216ENST00000489707 LRRC47Q8N1G4 583 aaKnown RBP17.49■□□□□ 0.39
PTK7-216ENST00000489707 STAMQ92783 540 aa17.49■□□□□ 0.39
PTK7-216ENST00000489707 MED15Q96RN5 788 aa17.49■□□□□ 0.39
PTK7-216ENST00000489707 BAG1Q99933 345 aaPredicted RBP17.49■□□□□ 0.39
PTK7-216ENST00000489707 KBTBD4Q9NVX7 518 aa17.49■□□□□ 0.39
PTK7-216ENST00000489707 FRMPD2Q68DX3 1309 aaPredicted RBP17.48■□□□□ 0.39
PTK7-216ENST00000489707 CASP1P29466 404 aa17.48■□□□□ 0.39
PTK7-216ENST00000489707 TBCKQ8TEA7 893 aa17.48■□□□□ 0.39
PTK7-216ENST00000489707 CALML4Q96GE6 196 aa17.48■□□□□ 0.39
PTK7-216ENST00000489707 NAP1L4Q99733 375 aaKnown RBP17.48■□□□□ 0.39
PTK7-216ENST00000489707 NAA15Q9BXJ9 866 aaKnown RBP17.48■□□□□ 0.39
PTK7-216ENST00000489707 TRIM34Q9BYJ4 488 aa17.48■□□□□ 0.39
PTK7-216ENST00000489707 UBA5Q9GZZ9 404 aa17.48■□□□□ 0.39
PTK7-216ENST00000489707 CPVLQ9H3G5 476 aa17.48■□□□□ 0.39
PTK7-216ENST00000489707 H7C1D1 291 aa17.47■□□□□ 0.39
PTK7-216ENST00000489707 MPHOSPH10O00566 681 aaKnown RBP17.47■□□□□ 0.39
PTK7-216ENST00000489707 STX17P56962 302 aa17.47■□□□□ 0.39
PTK7-216ENST00000489707 SUPT20HQ8NEM7 779 aa17.47■□□□□ 0.39
PTK7-216ENST00000489707 PANX2Q96RD6 677 aa17.47■□□□□ 0.39
PTK7-216ENST00000489707 MTRQ99707 1265 aa17.47■□□□□ 0.39
PTK7-216ENST00000489707 IDI2Q9BXS1 227 aa17.47■□□□□ 0.39
PTK7-216ENST00000489707 PI4KBQ9UBF8 816 aa17.47■□□□□ 0.39
PTK7-216ENST00000489707 ADD3Q9UEY8 706 aaKnown RBP17.47■□□□□ 0.39
PTK7-216ENST00000489707 HOXA7P31268 230 aaPredicted RBP17.47■□□□□ 0.39
PTK7-216ENST00000489707 MRPL12P52815 198 aaKnown RBP17.47■□□□□ 0.39
PTK7-216ENST00000489707 RASGRP2Q7LDG7 609 aa17.47■□□□□ 0.39
PTK7-216ENST00000489707 NELFBQ8WX92 580 aa17.47■□□□□ 0.39
PTK7-216ENST00000489707 CCDC94Q9BW85 323 aaPredicted RBP17.47■□□□□ 0.39
PTK7-216ENST00000489707 DBNDD1Q9H9R9 158 aa17.47■□□□□ 0.39
PTK7-216ENST00000489707 LIMA1Q9UHB6 759 aaKnown RBP17.47■□□□□ 0.39
PTK7-216ENST00000489707 SERPINA10Q9UK55 444 aa17.47■□□□□ 0.39
PTK7-216ENST00000489707 SLX4Q8IY92 1834 aa17.46■□□□□ 0.39
PTK7-216ENST00000489707 ITIH6Q6UXX5 1313 aa17.46■□□□□ 0.39
PTK7-216ENST00000489707 AKR1B15C9JRZ8 316 aaPredicted RBP17.46■□□□□ 0.39
PTK7-216ENST00000489707 PSMA7O14818 248 aa17.46■□□□□ 0.39
PTK7-216ENST00000489707 CDC25AP30304 524 aa17.46■□□□□ 0.39
PTK7-216ENST00000489707 TRIM14Q14142 442 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms