RNA–Protein interactions for RNA: ENST00000489676.1

TFF3-203, Transcript of trefoil factor 3, humanhuman

TSL 2

Gene TFF3, Length 419 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFF3-203ENST00000489676 INTS4Q96HW7 963 aaKnown RBP12.64□□□□□ -0.39
TFF3-203ENST00000489676 PIGSQ96S52 555 aa12.64□□□□□ -0.39
TFF3-203ENST00000489676 PARK7Q99497 189 aaKnown RBP12.64□□□□□ -0.39
TFF3-203ENST00000489676 HOXC10Q9NYD6 342 aa12.64□□□□□ -0.39
TFF3-203ENST00000489676 PNMA3Q9UL41 463 aa12.64□□□□□ -0.39
TFF3-203ENST00000489676 ZNF214Q9UL59 606 aaPredicted RBP12.64□□□□□ -0.39
TFF3-203ENST00000489676 PPFIA3O75145 1194 aa12.63□□□□□ -0.39
TFF3-203ENST00000489676 QRICH1Q2TAL8 776 aa12.63□□□□□ -0.39
TFF3-203ENST00000489676 MB21D1Q8N884 522 aa12.63□□□□□ -0.39
TFF3-203ENST00000489676 SHISA4Q96DD7 197 aa12.63□□□□□ -0.39
TFF3-203ENST00000489676 CFHR5Q9BXR6 569 aa12.63□□□□□ -0.39
TFF3-203ENST00000489676 SLC26A6Q9BXS9 759 aa12.63□□□□□ -0.39
TFF3-203ENST00000489676 TXNRD2Q9NNW7 524 aa12.63□□□□□ -0.39
TFF3-203ENST00000489676 BTBD7Q9P203 1132 aa12.63□□□□□ -0.39
TFF3-203ENST00000489676 RBM27Q9P2N5 1060 aaKnown RBP12.63□□□□□ -0.39
TFF3-203ENST00000489676 PNMA6FA0A0J9YX94 578 aa12.62□□□□□ -0.39
TFF3-203ENST00000489676 hCG_1642624A0A1W2PR95 340 aa12.62□□□□□ -0.39
TFF3-203ENST00000489676 DEXIO95424 95 aa12.62□□□□□ -0.39
TFF3-203ENST00000489676 TAL1P17542 331 aaPredicted RBP12.62□□□□□ -0.39
TFF3-203ENST00000489676 OAZ1P54368 228 aa12.62□□□□□ -0.39
TFF3-203ENST00000489676 SNAP25P60880 206 aa12.62□□□□□ -0.39
TFF3-203ENST00000489676 HMGN5P82970 282 aaKnown RBP12.62□□□□□ -0.39
TFF3-203ENST00000489676 BECN1Q14457 450 aa12.62□□□□□ -0.39
TFF3-203ENST00000489676 TMEM132BQ14DG7 1078 aa12.62□□□□□ -0.39
TFF3-203ENST00000489676 TAF1CQ15572 869 aaPredicted RBP12.62□□□□□ -0.39
TFF3-203ENST00000489676 PFKFB3Q16875 520 aaPredicted RBP12.62□□□□□ -0.39
TFF3-203ENST00000489676 HOMER1Q86YM7 354 aa12.62□□□□□ -0.39
TFF3-203ENST00000489676 GTF3C2Q8WUA4 911 aaPredicted RBP12.62□□□□□ -0.39
TFF3-203ENST00000489676 RRP36Q96EU6 259 aaKnown RBP12.62□□□□□ -0.39
TFF3-203ENST00000489676 RBPJLQ9UBG7 517 aa12.62□□□□□ -0.39
TFF3-203ENST00000489676 MORF4L1Q9UBU8 362 aa12.62□□□□□ -0.39
TFF3-203ENST00000489676 RABGAP1Q9Y3P9 1069 aa12.62□□□□□ -0.39
TFF3-203ENST00000489676 V9GY48 417 aaPredicted RBP12.62□□□□□ -0.39
TFF3-203ENST00000489676 HTTP42858 3142 aa12.61□□□□□ -0.39
TFF3-203ENST00000489676 CA12O43570 354 aa12.61□□□□□ -0.39
TFF3-203ENST00000489676 PEX10O60683 326 aa12.61□□□□□ -0.39
TFF3-203ENST00000489676 ALDH1A1P00352 501 aa12.61□□□□□ -0.39
TFF3-203ENST00000489676 ICAM1P05362 532 aa12.61□□□□□ -0.39
TFF3-203ENST00000489676 BCRP11274 1271 aa12.61□□□□□ -0.39
TFF3-203ENST00000489676 SCG2P13521 617 aa12.61□□□□□ -0.39
TFF3-203ENST00000489676 GCLCP48506 637 aaPredicted RBP12.61□□□□□ -0.39
TFF3-203ENST00000489676 SSRP1Q08945 709 aaKnown RBP12.61□□□□□ -0.39
TFF3-203ENST00000489676 CRHR2Q13324 411 aa12.61□□□□□ -0.39
TFF3-203ENST00000489676 WWC2Q6AWC2 1192 aa12.61□□□□□ -0.39
TFF3-203ENST00000489676 OTUD7BQ6GQQ9 843 aa12.61□□□□□ -0.39
TFF3-203ENST00000489676 TYW1BQ6NUM6 668 aa12.61□□□□□ -0.39
TFF3-203ENST00000489676 SAMD1Q6SPF0 538 aaPredicted RBP12.61□□□□□ -0.39
TFF3-203ENST00000489676 TRIM22Q8IYM9 498 aa12.61□□□□□ -0.39
TFF3-203ENST00000489676 SMCR8Q8TEV9 937 aaPredicted RBP12.61□□□□□ -0.39
TFF3-203ENST00000489676 PIBF1Q8WXW3 757 aa12.61□□□□□ -0.39
TFF3-203ENST00000489676 VAT1LQ9HCJ6 419 aa12.61□□□□□ -0.39
TFF3-203ENST00000489676 ORC3Q9UBD5 711 aaPredicted RBP12.61□□□□□ -0.39
TFF3-203ENST00000489676 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.61□□□□□ -0.39
TFF3-203ENST00000489676 hCG_1984214I3L0E3 225 aa12.6□□□□□ -0.39
TFF3-203ENST00000489676 STXBP3O00186 592 aa12.6□□□□□ -0.39
TFF3-203ENST00000489676 OPLAHO14841 1288 aa12.6□□□□□ -0.39
TFF3-203ENST00000489676 TLR2O60603 784 aa12.6□□□□□ -0.39
TFF3-203ENST00000489676 ZBED4O75132 1171 aa12.6□□□□□ -0.39
TFF3-203ENST00000489676 ERVK-9P63128 1117 aa12.6□□□□□ -0.39
TFF3-203ENST00000489676 ERVK-24P63145 666 aa12.6□□□□□ -0.39
TFF3-203ENST00000489676 FAM110CQ1W6H9 321 aa12.6□□□□□ -0.39
TFF3-203ENST00000489676 PPP1R18Q6NYC8 613 aa12.6□□□□□ -0.39
TFF3-203ENST00000489676 CCDC174Q6PII3 467 aa12.6□□□□□ -0.39
TFF3-203ENST00000489676 FBXO11Q86XK2 927 aa12.6□□□□□ -0.39
TFF3-203ENST00000489676 ZNF713Q8N859 430 aaPredicted RBP12.6□□□□□ -0.39
TFF3-203ENST00000489676 GPKOWQ92917 476 aaPredicted RBP eCLIP12.6□□□□□ -0.39
TFF3-203ENST00000489676 DDX11Q96FC9 970 aa12.6□□□□□ -0.39
TFF3-203ENST00000489676 AGBL1Q96MI9 1066 aa12.6□□□□□ -0.39
TFF3-203ENST00000489676 AIFM3Q96NN9 605 aa12.6□□□□□ -0.39
TFF3-203ENST00000489676 TEX13BQ9BXU2 312 aa12.6□□□□□ -0.39
TFF3-203ENST00000489676 SPATC1LQ9H0A9 340 aa12.6□□□□□ -0.39
TFF3-203ENST00000489676 RAVER2Q9HCJ3 691 aaKnown RBP12.6□□□□□ -0.39
TFF3-203ENST00000489676 BARHL2Q9NY43 387 aa12.6□□□□□ -0.39
TFF3-203ENST00000489676 SEC63Q9UGP8 760 aaKnown RBP12.6□□□□□ -0.39
TFF3-203ENST00000489676 LCTP09848 1927 aa12.6□□□□□ -0.39
TFF3-203ENST00000489676 ZNF236Q9UL36 1845 aa12.6□□□□□ -0.39
TFF3-203ENST00000489676 GJB2P29033 226 aa12.59□□□□□ -0.39
TFF3-203ENST00000489676 C17orf99Q6UX52 265 aa12.59□□□□□ -0.39
TFF3-203ENST00000489676 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.59□□□□□ -0.39
TFF3-203ENST00000489676 RIOX2Q8IUF8 465 aa12.59□□□□□ -0.39
TFF3-203ENST00000489676 PAGR1Q9BTK6 254 aa12.59□□□□□ -0.39
TFF3-203ENST00000489676 AMNQ9BXJ7 453 aa12.59□□□□□ -0.39
TFF3-203ENST00000489676 R3HDMLQ9H3Y0 253 aa12.59□□□□□ -0.39
TFF3-203ENST00000489676 ZFYVE28Q9HCC9 887 aa12.59□□□□□ -0.39
TFF3-203ENST00000489676 PRDM10Q9NQV6 1147 aa12.59□□□□□ -0.39
TFF3-203ENST00000489676 CCPG1Q9ULG6 757 aa12.59□□□□□ -0.39
TFF3-203ENST00000489676 SMC3Q9UQE7 1217 aa12.59□□□□□ -0.39
TFF3-203ENST00000489676 RIPK3Q9Y572 518 aa12.59□□□□□ -0.39
TFF3-203ENST00000489676 ZSWIM8A7E2V4 1837 aa12.58□□□□□ -0.4
TFF3-203ENST00000489676 ESYT2A0FGR8 921 aa12.58□□□□□ -0.4
TFF3-203ENST00000489676 FOXN1O15353 648 aa12.58□□□□□ -0.4
TFF3-203ENST00000489676 STAT3P40763 770 aa12.58□□□□□ -0.4
TFF3-203ENST00000489676 SLC4A3P48751 1232 aa12.58□□□□□ -0.4
TFF3-203ENST00000489676 AKAP17AQ02040 695 aaKnown RBP12.58□□□□□ -0.4
TFF3-203ENST00000489676 GHRHRQ02643 423 aa12.58□□□□□ -0.4
TFF3-203ENST00000489676 NPY5RQ15761 445 aa12.58□□□□□ -0.4
TFF3-203ENST00000489676 Q3C1V9 767 aa12.58□□□□□ -0.4
TFF3-203ENST00000489676 USH1GQ495M9 461 aa12.58□□□□□ -0.4
TFF3-203ENST00000489676 SNRNP48Q6IEG0 339 aaKnown RBP12.58□□□□□ -0.4
TFF3-203ENST00000489676 HEATR3Q7Z4Q2 680 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms