RNA–Protein interactions for RNA: ENST00000489583.1

APTX-229, Transcript of aprataxin, humanhuman

TSL 3

Gene APTX, Length 397 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-229ENST00000489583 ACAD9Q9H845 621 aa23.09■■□□□ 1.29
APTX-229ENST00000489583 LTBP2Q14767 1821 aa23.09■■□□□ 1.29
APTX-229ENST00000489583 ELP1O95163 1332 aa23.08■■□□□ 1.29
APTX-229ENST00000489583 DNAJC25-GNG10A0A024R161 153 aa23.08■■□□□ 1.29
APTX-229ENST00000489583 IGKV6D-41A0A0C4DH26 115 aa23.08■■□□□ 1.29
APTX-229ENST00000489583 SNAI1O95863 264 aaPredicted RBP23.08■■□□□ 1.29
APTX-229ENST00000489583 TFAP4Q01664 338 aa23.08■■□□□ 1.29
APTX-229ENST00000489583 GNASQ5JWF2 1037 aa23.08■■□□□ 1.29
APTX-229ENST00000489583 NEDD1Q8NHV4 660 aa23.08■■□□□ 1.29
APTX-229ENST00000489583 MAFAQ8NHW3 353 aaPredicted RBP23.08■■□□□ 1.29
APTX-229ENST00000489583 EPB41L4AQ9HCS5 686 aaPredicted RBP23.08■■□□□ 1.29
APTX-229ENST00000489583 TMEM265A0A087WTH1 108 aa23.07■■□□□ 1.28
APTX-229ENST00000489583 TSPY2A6NKD2 308 aa23.07■■□□□ 1.28
APTX-229ENST00000489583 CCDC144BQ3MJ40 725 aa23.07■■□□□ 1.28
APTX-229ENST00000489583 ARMCX2Q7L311 632 aa23.07■■□□□ 1.28
APTX-229ENST00000489583 STX8Q9UNK0 236 aa23.07■■□□□ 1.28
APTX-229ENST00000489583 A0A0U1RQG5 324 aaPredicted RBP23.06■■□□□ 1.28
APTX-229ENST00000489583 ASB14A6NK59 587 aa23.06■■□□□ 1.28
APTX-229ENST00000489583 FOSL2P15408 326 aa23.06■■□□□ 1.28
APTX-229ENST00000489583 PPARAQ07869 468 aa23.06■■□□□ 1.28
APTX-229ENST00000489583 FAAP100Q0VG06 881 aa23.06■■□□□ 1.28
APTX-229ENST00000489583 TKFCQ3LXA3 575 aa23.06■■□□□ 1.28
APTX-229ENST00000489583 KLHDC9Q8NEP7 349 aa23.06■■□□□ 1.28
APTX-229ENST00000489583 SMCHD1A6NHR9 2005 aa23.06■■□□□ 1.28
APTX-229ENST00000489583 LAMA2P24043 3122 aaKnown RBP23.05■■□□□ 1.28
APTX-229ENST00000489583 HSFX4A0A1B0GTS1 333 aaPredicted RBP23.05■■□□□ 1.28
APTX-229ENST00000489583 HSFX3A0A1B0GWH4 333 aaPredicted RBP23.05■■□□□ 1.28
APTX-229ENST00000489583 ZEB2O60315 1214 aa23.05■■□□□ 1.28
APTX-229ENST00000489583 TIMP1P01033 207 aa23.05■■□□□ 1.28
APTX-229ENST00000489583 ASGR1P07306 291 aa23.05■■□□□ 1.28
APTX-229ENST00000489583 CST5P28325 142 aaPredicted RBP23.05■■□□□ 1.28
APTX-229ENST00000489583 PPIGQ13427 754 aaKnown RBP eCLIP23.05■■□□□ 1.28
APTX-229ENST00000489583 DHX30Q7L2E3 1194 aaKnown RBP eCLIP23.05■■□□□ 1.28
APTX-229ENST00000489583 CCDC144CPQ8IYA2 1237 aa23.05■■□□□ 1.28
APTX-229ENST00000489583 TMEM199Q8N511 208 aa23.05■■□□□ 1.28
APTX-229ENST00000489583 STAG1Q8WVM7 1258 aa23.05■■□□□ 1.28
APTX-229ENST00000489583 GJA9P57773 515 aa23.04■■□□□ 1.28
APTX-229ENST00000489583 GMCL1Q96IK5 515 aa23.04■■□□□ 1.28
APTX-229ENST00000489583 AP5M1Q9H0R1 490 aa23.04■■□□□ 1.28
APTX-229ENST00000489583 RNF146Q9NTX7 359 aa23.04■■□□□ 1.28
APTX-229ENST00000489583 PLIN4Q96Q06 1357 aa23.03■■□□□ 1.28
APTX-229ENST00000489583 ALAS1P13196 640 aa23.03■■□□□ 1.28
APTX-229ENST00000489583 MX1P20591 662 aa23.03■■□□□ 1.28
APTX-229ENST00000489583 MCCP23508 829 aa23.03■■□□□ 1.28
APTX-229ENST00000489583 ITGB8P26012 769 aa23.03■■□□□ 1.28
APTX-229ENST00000489583 TNFAIP2Q03169 654 aa23.03■■□□□ 1.28
APTX-229ENST00000489583 MYLIPQ8WY64 445 aa23.03■■□□□ 1.28
APTX-229ENST00000489583 TRERF1Q96PN7 1200 aa23.03■■□□□ 1.28
APTX-229ENST00000489583 GREB1LQ9C091 1923 aaPredicted RBP23.03■■□□□ 1.28
APTX-229ENST00000489583 MYH4Q9Y623 1939 aa23.03■■□□□ 1.28
APTX-229ENST00000489583 ARVCFO00192 962 aa23.02■■□□□ 1.28
APTX-229ENST00000489583 CABYRO75952 493 aa23.02■■□□□ 1.28
APTX-229ENST00000489583 ZMYM1Q5SVZ6 1142 aa23.02■■□□□ 1.28
APTX-229ENST00000489583 MFSD5Q6N075 450 aa23.02■■□□□ 1.28
APTX-229ENST00000489583 CCDC129Q6ZRS4 1044 aa23.02■■□□□ 1.28
APTX-229ENST00000489583 CHMP4CQ96CF2 233 aa23.02■■□□□ 1.28
APTX-229ENST00000489583 SEC62Q99442 399 aaKnown RBP23.02■■□□□ 1.28
APTX-229ENST00000489583 MTIF3Q9H2K0 278 aaKnown RBP23.02■■□□□ 1.28
APTX-229ENST00000489583 TOMM22Q9NS69 142 aa23.02■■□□□ 1.28
APTX-229ENST00000489583 RANBP6O60518 1105 aaKnown RBP23.01■■□□□ 1.27
APTX-229ENST00000489583 RCSD1Q6JBY9 416 aa23.01■■□□□ 1.27
APTX-229ENST00000489583 COL25A1Q9BXS0 654 aaPredicted RBP23.01■■□□□ 1.27
APTX-229ENST00000489583 UPF3AQ9H1J1 476 aaKnown RBP23.01■■□□□ 1.27
APTX-229ENST00000489583 MTMR7Q9Y216 660 aa23.01■■□□□ 1.27
APTX-229ENST00000489583 CNTN2Q02246 1040 aa23■■□□□ 1.27
APTX-229ENST00000489583 CCDC96Q2M329 555 aa23■■□□□ 1.27
APTX-229ENST00000489583 CCSAPQ6IQ19 270 aaPredicted RBP23■■□□□ 1.27
APTX-229ENST00000489583 AGBL1Q96MI9 1066 aa23■■□□□ 1.27
APTX-229ENST00000489583 SEZ6LQ9BYH1 1024 aa23■■□□□ 1.27
APTX-229ENST00000489583 MYADML2A6NDP7 307 aa22.99■■□□□ 1.27
APTX-229ENST00000489583 PLA2G6O60733 806 aa22.99■■□□□ 1.27
APTX-229ENST00000489583 DNAJB2P25686 324 aa22.99■■□□□ 1.27
APTX-229ENST00000489583 EPHB4P54760 987 aa22.99■■□□□ 1.27
APTX-229ENST00000489583 PSRC1Q6PGN9 363 aaPredicted RBP22.99■■□□□ 1.27
APTX-229ENST00000489583 KCTD1Q719H9 257 aa22.99■■□□□ 1.27
APTX-229ENST00000489583 PI4K2BQ8TCG2 481 aa22.99■■□□□ 1.27
APTX-229ENST00000489583 TTYH1Q9H313 450 aaPredicted RBP22.99■■□□□ 1.27
APTX-229ENST00000489583 A1CFQ9NQ94 594 aaKnown RBP22.99■■□□□ 1.27
APTX-229ENST00000489583 TBX21Q9UL17 535 aa22.99■■□□□ 1.27
APTX-229ENST00000489583 CCPG1Q9ULG6 757 aa22.99■■□□□ 1.27
APTX-229ENST00000489583 TLK2Q86UE8 772 aa22.98■■□□□ 1.27
APTX-229ENST00000489583 FAM133AQ8N9E0 248 aa22.98■■□□□ 1.27
APTX-229ENST00000489583 SYMPKQ92797 1274 aaKnown RBP22.98■■□□□ 1.27
APTX-229ENST00000489583 TIFAQ96CG3 184 aa22.98■■□□□ 1.27
APTX-229ENST00000489583 MPHOSPH6Q99547 160 aaKnown RBP22.98■■□□□ 1.27
APTX-229ENST00000489583 PPP1R12CQ9BZL4 782 aa22.98■■□□□ 1.27
APTX-229ENST00000489583 CUL9Q8IWT3 2517 aa22.97■■□□□ 1.27
APTX-229ENST00000489583 CDK7P50613 346 aa22.97■■□□□ 1.27
APTX-229ENST00000489583 CTDSPL2Q05D32 466 aa22.97■■□□□ 1.27
APTX-229ENST00000489583 FSCN1Q16658 493 aaKnown RBP22.97■■□□□ 1.27
APTX-229ENST00000489583 IQSEC1Q6DN90 963 aa22.97■■□□□ 1.27
APTX-229ENST00000489583 NSMFQ6X4W1 530 aa22.97■■□□□ 1.27
APTX-229ENST00000489583 DCAF4Q8WV16 495 aa22.97■■□□□ 1.27
APTX-229ENST00000489583 EVI5LQ96CN4 794 aa22.97■■□□□ 1.27
APTX-229ENST00000489583 GAS2L1Q99501 681 aaPredicted RBP22.97■■□□□ 1.27
APTX-229ENST00000489583 ADD3Q9UEY8 706 aaKnown RBP22.97■■□□□ 1.27
APTX-229ENST00000489583 BEX3Q00994 111 aa22.96■■□□□ 1.27
APTX-229ENST00000489583 ANKRD45Q5TZF3 282 aa22.96■■□□□ 1.27
APTX-229ENST00000489583 BUD13Q9BRD0 619 aaKnown RBP eCLIP22.96■■□□□ 1.27
APTX-229ENST00000489583 ZNF576Q9H609 170 aa22.96■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms