RNA–Protein interactions for RNA: ENST00000489581.1

TOP3B-217, Transcript of DNA topoisomerase III beta, humanhuman

TSL 2

Gene TOP3B, Length 789 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-217ENST00000489581 GPAA1O43292 621 aa20.25■□□□□ 0.83
TOP3B-217ENST00000489581 APPP05067 770 aa20.25■□□□□ 0.83
TOP3B-217ENST00000489581 GNASQ5JWF2 1037 aa20.25■□□□□ 0.83
TOP3B-217ENST00000489581 MFSD5Q6N075 450 aa20.25■□□□□ 0.83
TOP3B-217ENST00000489581 DHX30Q7L2E3 1194 aaKnown RBP eCLIP20.25■□□□□ 0.83
TOP3B-217ENST00000489581 C16orf59Q7L2K0 433 aa20.25■□□□□ 0.83
TOP3B-217ENST00000489581 ARMCX2Q7L311 632 aa20.25■□□□□ 0.83
TOP3B-217ENST00000489581 LRRC47Q8N1G4 583 aaKnown RBP20.25■□□□□ 0.83
TOP3B-217ENST00000489581 CHST13Q8NET6 341 aa20.25■□□□□ 0.83
TOP3B-217ENST00000489581 MKL1Q969V6 931 aa20.25■□□□□ 0.83
TOP3B-217ENST00000489581 TIFAQ96CG3 184 aa20.25■□□□□ 0.83
TOP3B-217ENST00000489581 HOMER2Q9NSB8 354 aa20.25■□□□□ 0.83
TOP3B-217ENST00000489581 MTMR4Q9NYA4 1195 aa20.25■□□□□ 0.83
TOP3B-217ENST00000489581 FBXO40Q9UH90 709 aa20.25■□□□□ 0.83
TOP3B-217ENST00000489581 ARVCFO00192 962 aa20.24■□□□□ 0.83
TOP3B-217ENST00000489581 CSF2RAP15509 400 aa20.24■□□□□ 0.83
TOP3B-217ENST00000489581 GJA9P57773 515 aa20.24■□□□□ 0.83
TOP3B-217ENST00000489581 PPIGQ13427 754 aaKnown RBP eCLIP20.24■□□□□ 0.831e-10■■■■□ 20.6
TOP3B-217ENST00000489581 TMEM240Q5SV17 173 aa20.24■□□□□ 0.83
TOP3B-217ENST00000489581 USP38Q8NB14 1042 aa20.24■□□□□ 0.83
TOP3B-217ENST00000489581 UPF3AQ9H1J1 476 aaKnown RBP20.24■□□□□ 0.83
TOP3B-217ENST00000489581 A0A0U1RQG5 324 aaPredicted RBP20.23■□□□□ 0.83
TOP3B-217ENST00000489581 GRXCR1A8MXD5 290 aa20.23■□□□□ 0.83
TOP3B-217ENST00000489581 M0R2C6 588 aa20.23■□□□□ 0.83
TOP3B-217ENST00000489581 TTLL1O95922 423 aa20.23■□□□□ 0.83
TOP3B-217ENST00000489581 ACRP10323 421 aa20.23■□□□□ 0.83
TOP3B-217ENST00000489581 CNTN2Q02246 1040 aa20.23■□□□□ 0.83
TOP3B-217ENST00000489581 C20orf194Q5TEA3 1177 aa20.23■□□□□ 0.83
TOP3B-217ENST00000489581 CCDC129Q6ZRS4 1044 aa20.23■□□□□ 0.83
TOP3B-217ENST00000489581 CCDC144CPQ8IYA2 1237 aa20.23■□□□□ 0.83
TOP3B-217ENST00000489581 CHMP4CQ96CF2 233 aa20.23■□□□□ 0.83
TOP3B-217ENST00000489581 PPP1R12CQ9BZL4 782 aa20.23■□□□□ 0.83
TOP3B-217ENST00000489581 ZNF287Q9HBT7 754 aa20.23■□□□□ 0.83
TOP3B-217ENST00000489581 ISY1Q9ULR0 285 aaKnown RBP20.23■□□□□ 0.83
TOP3B-217ENST00000489581 BMP3P12645 472 aa20.22■□□□□ 0.83
TOP3B-217ENST00000489581 GNAT2P19087 354 aa20.22■□□□□ 0.83
TOP3B-217ENST00000489581 PBX2P40425 430 aa20.22■□□□□ 0.83
TOP3B-217ENST00000489581 BEX3Q00994 111 aa20.22■□□□□ 0.83
TOP3B-217ENST00000489581 SLFN13Q68D06 897 aa20.22■□□□□ 0.83
TOP3B-217ENST00000489581 TMEM199Q8N511 208 aa20.22■□□□□ 0.83
TOP3B-217ENST00000489581 SYMPKQ92797 1274 aaKnown RBP20.22■□□□□ 0.83
TOP3B-217ENST00000489581 RCAN3Q9UKA8 241 aa20.22■□□□□ 0.83
TOP3B-217ENST00000489581 C11orf97A0A1B0GVM6 126 aaPredicted RBP20.21■□□□□ 0.83
TOP3B-217ENST00000489581 PATL2C9JE40 543 aaKnown RBP20.21■□□□□ 0.83
TOP3B-217ENST00000489581 TMEM232C9JQI7 657 aa20.21■□□□□ 0.83
TOP3B-217ENST00000489581 CTAGE5O15320 804 aa20.21■□□□□ 0.83
TOP3B-217ENST00000489581 ZFYP08048 801 aaPredicted RBP20.21■□□□□ 0.83
TOP3B-217ENST00000489581 OAZ1P54368 228 aa20.21■□□□□ 0.83
TOP3B-217ENST00000489581 ZNF365Q70YC5 407 aa20.21■□□□□ 0.83
TOP3B-217ENST00000489581 NOL8Q76FK4 1167 aaKnown RBP20.21■□□□□ 0.83
TOP3B-217ENST00000489581 FAM126BQ8IXS8 530 aa20.21■□□□□ 0.83
TOP3B-217ENST00000489581 IFNL3Q8IZI9 196 aa20.21■□□□□ 0.83
TOP3B-217ENST00000489581 GMCL1P1Q8NEA9 526 aa20.21■□□□□ 0.83
TOP3B-217ENST00000489581 GPATCH3Q96I76 525 aa20.21■□□□□ 0.83
TOP3B-217ENST00000489581 PBX4Q9BYU1 374 aa20.21■□□□□ 0.83
TOP3B-217ENST00000489581 KATNBL1Q9H079 304 aa20.21■□□□□ 0.83
TOP3B-217ENST00000489581 TLR3O15455 904 aaKnown RBP20.2■□□□□ 0.82
TOP3B-217ENST00000489581 TSPY3P0CV98 308 aa20.2■□□□□ 0.82
TOP3B-217ENST00000489581 TSPY8P0CW00 308 aa20.2■□□□□ 0.82
TOP3B-217ENST00000489581 DIEXFQ68CQ4 756 aaKnown RBP20.2■□□□□ 0.82
TOP3B-217ENST00000489581 CCDC174Q6PII3 467 aa20.2■□□□□ 0.82
TOP3B-217ENST00000489581 NEDD1Q8NHV4 660 aa20.2■□□□□ 0.82
TOP3B-217ENST00000489581 PPM1EQ8WY54 764 aa20.2■□□□□ 0.82
TOP3B-217ENST00000489581 AGBL1Q96MI9 1066 aa20.2■□□□□ 0.82
TOP3B-217ENST00000489581 ACAD9Q9H845 621 aa20.2■□□□□ 0.82
TOP3B-217ENST00000489581 PRDM6Q9NQX0 595 aa20.2■□□□□ 0.82
TOP3B-217ENST00000489581 SYNPO2Q9UMS6 1093 aa20.2■□□□□ 0.82
TOP3B-217ENST00000489581 GBF1Q92538 1859 aa20.2■□□□□ 0.82
TOP3B-217ENST00000489581 CYP2C18P33260 490 aa20.19■□□□□ 0.82
TOP3B-217ENST00000489581 STAT2P52630 851 aa20.19■□□□□ 0.82
TOP3B-217ENST00000489581 TFAP4Q01664 338 aa20.19■□□□□ 0.82
TOP3B-217ENST00000489581 TNFAIP2Q03169 654 aa20.19■□□□□ 0.82
TOP3B-217ENST00000489581 IKQ13123 557 aaPredicted RBP20.19■□□□□ 0.82
TOP3B-217ENST00000489581 RASIP1Q5U651 963 aa20.19■□□□□ 0.82
TOP3B-217ENST00000489581 FAM133AQ8N9E0 248 aa20.19■□□□□ 0.82
TOP3B-217ENST00000489581 SEC62Q99442 399 aaKnown RBP20.19■□□□□ 0.82
TOP3B-217ENST00000489581 PRDM12Q9H4Q4 367 aa20.19■□□□□ 0.82
TOP3B-217ENST00000489581 A1CFQ9NQ94 594 aaKnown RBP20.19■□□□□ 0.82
TOP3B-217ENST00000489581 RNF146Q9NTX7 359 aa20.19■□□□□ 0.82
TOP3B-217ENST00000489581 SOWAHBA6NEL2 793 aa20.18■□□□□ 0.82
TOP3B-217ENST00000489581 CD4P01730 458 aa20.18■□□□□ 0.82
TOP3B-217ENST00000489581 FDX1P10109 184 aa20.18■□□□□ 0.82
TOP3B-217ENST00000489581 PTGS1P23219 599 aa20.18■□□□□ 0.82
TOP3B-217ENST00000489581 PDE4BQ07343 736 aa20.18■□□□□ 0.82
TOP3B-217ENST00000489581 TJAP1Q5JTD0 557 aa20.18■□□□□ 0.82
TOP3B-217ENST00000489581 CXCL17Q6UXB2 119 aa20.18■□□□□ 0.82
TOP3B-217ENST00000489581 CHURC1Q8WUH1 139 aa20.18■□□□□ 0.82
TOP3B-217ENST00000489581 GAS2L1Q99501 681 aaPredicted RBP20.18■□□□□ 0.82
TOP3B-217ENST00000489581 DCTPP1Q9H773 170 aa20.18■□□□□ 0.82
TOP3B-217ENST00000489581 DDX49Q9Y6V7 483 aaKnown RBP20.18■□□□□ 0.82
TOP3B-217ENST00000489581 ASTN1O14525 1302 aa20.18■□□□□ 0.82
TOP3B-217ENST00000489581 PLIN4Q96Q06 1357 aa20.18■□□□□ 0.82
TOP3B-217ENST00000489581 NCOR1O75376 2440 aa20.17■□□□□ 0.82
TOP3B-217ENST00000489581 MCCP23508 829 aa20.17■□□□□ 0.82
TOP3B-217ENST00000489581 SLC1A4P43007 532 aa20.17■□□□□ 0.82
TOP3B-217ENST00000489581 SNAP25P60880 206 aa20.17■□□□□ 0.82
TOP3B-217ENST00000489581 PSRC1Q6PGN9 363 aaPredicted RBP20.17■□□□□ 0.82
TOP3B-217ENST00000489581 FAM160B2Q86V87 743 aa20.17■□□□□ 0.82
TOP3B-217ENST00000489581 STAG1Q8WVM7 1258 aa20.17■□□□□ 0.82
TOP3B-217ENST00000489581 TRERF1Q96PN7 1200 aa20.17■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms