RNA–Protein interactions for RNA: ENST00000489519.1

CACFD1-205, Transcript of calcium channel flower domain containing 1, humanhuman

TSL 2

Gene CACFD1, Length 795 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACFD1-205ENST00000489519 TLE2Q04725 743 aa23.76■■□□□ 1.39
CACFD1-205ENST00000489519 SMC5Q8IY18 1101 aa23.76■■□□□ 1.39
CACFD1-205ENST00000489519 FAM227BQ96M60 508 aa23.76■■□□□ 1.39
CACFD1-205ENST00000489519 HOMER2Q9NSB8 354 aa23.76■■□□□ 1.39
CACFD1-205ENST00000489519 TACC3Q9Y6A5 838 aa23.76■■□□□ 1.39
CACFD1-205ENST00000489519 LAMA2P24043 3122 aaKnown RBP23.75■■□□□ 1.39
CACFD1-205ENST00000489519 A0A0D9SFI3 127 aa23.75■■□□□ 1.39
CACFD1-205ENST00000489519 A0A1W2PQ45 241 aaPredicted RBP23.75■■□□□ 1.39
CACFD1-205ENST00000489519 A0A1W2PQY0 241 aa23.75■■□□□ 1.39
CACFD1-205ENST00000489519 TRIM6-TRIM34B2RNG4 842 aa23.75■■□□□ 1.39
CACFD1-205ENST00000489519 KCTD1Q719H9 257 aa23.75■■□□□ 1.39
CACFD1-205ENST00000489519 NUP133Q8WUM0 1156 aa23.75■■□□□ 1.39
CACFD1-205ENST00000489519 AGBL1Q96MI9 1066 aa23.75■■□□□ 1.39
CACFD1-205ENST00000489519 PDLIM7Q9NR12 457 aa23.75■■□□□ 1.39
CACFD1-205ENST00000489519 ZNF536O15090 1300 aa23.75■■□□□ 1.39
CACFD1-205ENST00000489519 MOXD2PA6NHM9 499 aa23.74■■□□□ 1.39
CACFD1-205ENST00000489519 POTEB2H3BUK9 544 aa23.74■■□□□ 1.39
CACFD1-205ENST00000489519 HSPD1P10809 573 aaKnown RBP23.74■■□□□ 1.39
CACFD1-205ENST00000489519 KLHDC9Q8NEP7 349 aa23.74■■□□□ 1.39
CACFD1-205ENST00000489519 LENG1Q96BZ8 264 aaPredicted RBP23.74■■□□□ 1.39
CACFD1-205ENST00000489519 CHMP4CQ96CF2 233 aa23.74■■□□□ 1.39
CACFD1-205ENST00000489519 FGD4Q96M96 766 aa23.74■■□□□ 1.39
CACFD1-205ENST00000489519 SPC25Q9HBM1 224 aa23.74■■□□□ 1.39
CACFD1-205ENST00000489519 TOMM22Q9NS69 142 aa23.74■■□□□ 1.39
CACFD1-205ENST00000489519 RNF146Q9NTX7 359 aa23.74■■□□□ 1.39
CACFD1-205ENST00000489519 ZMYM6O95789 1325 aa23.74■■□□□ 1.39
CACFD1-205ENST00000489519 SYNRGQ9UMZ2 1314 aa23.74■■□□□ 1.39
CACFD1-205ENST00000489519 COL6A3P12111 3177 aa23.74■■□□□ 1.39
CACFD1-205ENST00000489519 LTBP2Q14767 1821 aa23.73■■□□□ 1.39
CACFD1-205ENST00000489519 MCM3APO60318 1980 aa23.73■■□□□ 1.39
CACFD1-205ENST00000489519 ACLYP53396 1101 aa23.73■■□□□ 1.39
CACFD1-205ENST00000489519 CCDC144BQ3MJ40 725 aa23.73■■□□□ 1.39
CACFD1-205ENST00000489519 ARMCX2Q7L311 632 aa23.73■■□□□ 1.39
CACFD1-205ENST00000489519 CCDC144CPQ8IYA2 1237 aa23.73■■□□□ 1.39
CACFD1-205ENST00000489519 FAM133AQ8N9E0 248 aa23.73■■□□□ 1.39
CACFD1-205ENST00000489519 DCAF4Q8WV16 495 aa23.73■■□□□ 1.39
CACFD1-205ENST00000489519 YTHDC1Q96MU7 727 aaKnown RBP23.73■■□□□ 1.39
CACFD1-205ENST00000489519 TRERF1Q96PN7 1200 aa23.73■■□□□ 1.39
CACFD1-205ENST00000489519 A1CFQ9NQ94 594 aaKnown RBP23.73■■□□□ 1.39
CACFD1-205ENST00000489519 TCP11L1Q9NUJ3 509 aa23.73■■□□□ 1.39
CACFD1-205ENST00000489519 PRR12Q9ULL5 1215 aa23.73■■□□□ 1.39
CACFD1-205ENST00000489519 TRIM43BA6NCK2 446 aa23.72■■□□□ 1.39
CACFD1-205ENST00000489519 CLTBP09497 229 aa23.72■■□□□ 1.39
CACFD1-205ENST00000489519 PCP11498 1178 aaKnown RBP23.72■■□□□ 1.39
CACFD1-205ENST00000489519 ALAS1P13196 640 aa23.72■■□□□ 1.39
CACFD1-205ENST00000489519 MFAP1P55081 439 aaKnown RBP23.72■■□□□ 1.39
CACFD1-205ENST00000489519 CNTN2Q02246 1040 aa23.72■■□□□ 1.39
CACFD1-205ENST00000489519 NMIQ13287 307 aaPredicted RBP23.72■■□□□ 1.39
CACFD1-205ENST00000489519 KCNA10Q16322 511 aa23.72■■□□□ 1.39
CACFD1-205ENST00000489519 RRP12Q5JTH9 1297 aaKnown RBP23.72■■□□□ 1.39
CACFD1-205ENST00000489519 SH3RF1Q7Z6J0 888 aa23.72■■□□□ 1.39
CACFD1-205ENST00000489519 PCSK9Q8NBP7 692 aaKnown RBP23.72■■□□□ 1.39
CACFD1-205ENST00000489519 BADQ92934 168 aa23.72■■□□□ 1.39
CACFD1-205ENST00000489519 RILPL2Q969X0 211 aa23.72■■□□□ 1.39
CACFD1-205ENST00000489519 TRIM43Q96BQ3 446 aaPredicted RBP23.72■■□□□ 1.39
CACFD1-205ENST00000489519 TOX2Q96NM4 488 aa23.72■■□□□ 1.39
CACFD1-205ENST00000489519 STARD7Q9NQZ5 370 aa23.72■■□□□ 1.39
CACFD1-205ENST00000489519 CCDC171Q6TFL3 1326 aa23.71■■□□□ 1.39
CACFD1-205ENST00000489519 ASB14A6NK59 587 aa23.71■■□□□ 1.39
CACFD1-205ENST00000489519 TOP1P11387 765 aaKnown RBP23.71■■□□□ 1.39
CACFD1-205ENST00000489519 CST5P28325 142 aaPredicted RBP23.71■■□□□ 1.39
CACFD1-205ENST00000489519 CCSAPQ6IQ19 270 aaPredicted RBP23.71■■□□□ 1.39
CACFD1-205ENST00000489519 B4GALNT3Q6L9W6 998 aa23.71■■□□□ 1.39
CACFD1-205ENST00000489519 Q7L0L9 218 aa23.71■■□□□ 1.39
CACFD1-205ENST00000489519 CHD1LQ86WJ1 897 aa23.71■■□□□ 1.39
CACFD1-205ENST00000489519 MTMR10Q9NXD2 777 aa23.71■■□□□ 1.39
CACFD1-205ENST00000489519 PQBP1O60828 265 aaKnown RBP23.7■■□□□ 1.38
CACFD1-205ENST00000489519 C6orf222P0C671 652 aaPredicted RBP23.7■■□□□ 1.38
CACFD1-205ENST00000489519 CCDC96Q2M329 555 aa23.7■■□□□ 1.38
CACFD1-205ENST00000489519 FAM109BQ6ICB4 259 aaPredicted RBP23.7■■□□□ 1.38
CACFD1-205ENST00000489519 CCDC174Q6PII3 467 aa23.7■■□□□ 1.38
CACFD1-205ENST00000489519 ANKRD33Q7Z3H0 272 aa23.7■■□□□ 1.38
CACFD1-205ENST00000489519 ZNF589Q86UQ0 364 aaPredicted RBP23.7■■□□□ 1.38
CACFD1-205ENST00000489519 GLT1D1Q96MS3 346 aa23.7■■□□□ 1.38
CACFD1-205ENST00000489519 OSBPL3Q9H4L5 887 aa23.7■■□□□ 1.38
CACFD1-205ENST00000489519 MTMR7Q9Y216 660 aa23.7■■□□□ 1.38
CACFD1-205ENST00000489519 ELP1O95163 1332 aa23.69■■□□□ 1.38
CACFD1-205ENST00000489519 DCDC2CA8MYV0 355 aa23.69■■□□□ 1.38
CACFD1-205ENST00000489519 KIAA0355O15063 1070 aa23.69■■□□□ 1.38
CACFD1-205ENST00000489519 GJA9P57773 515 aa23.69■■□□□ 1.38
CACFD1-205ENST00000489519 NUCB1Q02818 461 aa23.69■■□□□ 1.38
CACFD1-205ENST00000489519 SHHQ15465 462 aa23.69■■□□□ 1.38
CACFD1-205ENST00000489519 BTNL9Q6UXG8 535 aa23.69■■□□□ 1.38
CACFD1-205ENST00000489519 MFSD6Q6ZSS7 791 aa23.69■■□□□ 1.38
CACFD1-205ENST00000489519 TTC14Q96N46 770 aa23.69■■□□□ 1.38
CACFD1-205ENST00000489519 TMEM47Q9BQJ4 181 aa23.69■■□□□ 1.38
CACFD1-205ENST00000489519 KATNBL1Q9H079 304 aa23.69■■□□□ 1.38
CACFD1-205ENST00000489519 UPF3AQ9H1J1 476 aaKnown RBP23.69■■□□□ 1.38
CACFD1-205ENST00000489519 CCPG1Q9ULG6 757 aa23.69■■□□□ 1.38
CACFD1-205ENST00000489519 SOWAHBA6NEL2 793 aa23.68■■□□□ 1.38
CACFD1-205ENST00000489519 ICAM1P05362 532 aa23.68■■□□□ 1.38
CACFD1-205ENST00000489519 SDSP20132 328 aa23.68■■□□□ 1.38
CACFD1-205ENST00000489519 SNAP25P60880 206 aa23.68■■□□□ 1.38
CACFD1-205ENST00000489519 GNASQ5JWF2 1037 aa23.68■■□□□ 1.38
CACFD1-205ENST00000489519 AKNAD1Q5T1N1 836 aa23.68■■□□□ 1.38
CACFD1-205ENST00000489519 PLEKHM2Q8IWE5 1019 aa23.68■■□□□ 1.38
CACFD1-205ENST00000489519 SLC17A8Q8NDX2 589 aa23.68■■□□□ 1.38
CACFD1-205ENST00000489519 RNF41Q9H4P4 317 aaPredicted RBP23.68■■□□□ 1.38
CACFD1-205ENST00000489519 TMEM39AQ9NV64 488 aa23.68■■□□□ 1.38
CACFD1-205ENST00000489519 STXBP5LQ9Y2K9 1186 aa23.68■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms