RNA–Protein interactions for RNA: ENST00000489469.5

SMIM11A-206, Transcript of small integral membrane protein 11A, humanhuman

TSL 2

Gene SMIM11A, Length 780 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11A-206ENST00000489469 RIOX2Q8IUF8 465 aa18.03■□□□□ 0.48
SMIM11A-206ENST00000489469 COA7Q96BR5 231 aa18.03■□□□□ 0.48
SMIM11A-206ENST00000489469 RANBP17Q9H2T7 1088 aaKnown RBP18.03■□□□□ 0.48
SMIM11A-206ENST00000489469 MROH8Q9H579 483 aa18.03■□□□□ 0.48
SMIM11A-206ENST00000489469 EFCC1Q9HA90 598 aa18.03■□□□□ 0.48
SMIM11A-206ENST00000489469 CWC22Q9HCG8 908 aaKnown RBP18.03■□□□□ 0.48
SMIM11A-206ENST00000489469 RBM28Q9NW13 759 aaKnown RBP18.03■□□□□ 0.48
SMIM11A-206ENST00000489469 CCDC196A0A1B0GTZ2 297 aa18.02■□□□□ 0.48
SMIM11A-206ENST00000489469 SMCHD1A6NHR9 2005 aa18.02■□□□□ 0.48
SMIM11A-206ENST00000489469 DHX16O60231 1041 aaKnown RBP18.02■□□□□ 0.48
SMIM11A-206ENST00000489469 EVCP57679 992 aa18.02■□□□□ 0.48
SMIM11A-206ENST00000489469 MICU3Q86XE3 530 aa18.02■□□□□ 0.48
SMIM11A-206ENST00000489469 STAG2Q8N3U4 1231 aa18.02■□□□□ 0.48
SMIM11A-206ENST00000489469 PIP4P2Q8N4L2 257 aa18.02■□□□□ 0.48
SMIM11A-206ENST00000489469 FANCBQ8NB91 859 aa18.02■□□□□ 0.48
SMIM11A-206ENST00000489469 MOV10L1Q9BXT6 1211 aaKnown RBP18.02■□□□□ 0.48
SMIM11A-206ENST00000489469 UBA5Q9GZZ9 404 aa18.02■□□□□ 0.48
SMIM11A-206ENST00000489469 BRPF3Q9ULD4 1205 aa18.02■□□□□ 0.48
SMIM11A-206ENST00000489469 ZNF236Q9UL36 1845 aa18.01■□□□□ 0.47
SMIM11A-206ENST00000489469 ICAM1P05362 532 aa18.01■□□□□ 0.47
SMIM11A-206ENST00000489469 APOBRQ0VD83 1088 aa18.01■□□□□ 0.47
SMIM11A-206ENST00000489469 TRAF1Q13077 416 aa18.01■□□□□ 0.47
SMIM11A-206ENST00000489469 PKN2Q16513 984 aaKnown RBP18.01■□□□□ 0.47
SMIM11A-206ENST00000489469 TKFCQ3LXA3 575 aa18.01■□□□□ 0.47
SMIM11A-206ENST00000489469 SNRNP48Q6IEG0 339 aaKnown RBP18.01■□□□□ 0.47
SMIM11A-206ENST00000489469 ADGRF4Q8IZF3 695 aa18.01■□□□□ 0.47
SMIM11A-206ENST00000489469 CPXCR1Q8N123 301 aa18.01■□□□□ 0.47
SMIM11A-206ENST00000489469 TRIM47Q96LD4 638 aa18.01■□□□□ 0.47
SMIM11A-206ENST00000489469 MYL10Q9BUA6 226 aa18.01■□□□□ 0.47
SMIM11A-206ENST00000489469 FBXO40Q9UH90 709 aa18.01■□□□□ 0.47
SMIM11A-206ENST00000489469 NAP1L2Q9ULW6 460 aaPredicted RBP18.01■□□□□ 0.47
SMIM11A-206ENST00000489469 IVNS1ABPQ9Y6Y0 642 aa18.01■□□□□ 0.47
SMIM11A-206ENST00000489469 GOLGA8AA7E2F4 631 aa18■□□□□ 0.47
SMIM11A-206ENST00000489469 GOLGA8BA8MQT2 603 aa18■□□□□ 0.47
SMIM11A-206ENST00000489469 STRNO43815 780 aa18■□□□□ 0.47
SMIM11A-206ENST00000489469 PEX10O60683 326 aa18■□□□□ 0.47
SMIM11A-206ENST00000489469 ERCC3P19447 782 aa18■□□□□ 0.47
SMIM11A-206ENST00000489469 METAP2P50579 478 aaKnown RBP eCLIP18■□□□□ 0.47
SMIM11A-206ENST00000489469 NEK4P51957 841 aa18■□□□□ 0.47
SMIM11A-206ENST00000489469 TOB2Q14106 344 aaPredicted RBP18■□□□□ 0.47
SMIM11A-206ENST00000489469 RTN1Q16799 776 aa18■□□□□ 0.47
SMIM11A-206ENST00000489469 WDR78Q5VTH9 848 aa18■□□□□ 0.47
SMIM11A-206ENST00000489469 OTOP1Q7RTM1 612 aa18■□□□□ 0.47
SMIM11A-206ENST00000489469 PLEKHH3Q7Z736 793 aa18■□□□□ 0.47
SMIM11A-206ENST00000489469 NCAPG2Q86XI2 1143 aa18■□□□□ 0.47
SMIM11A-206ENST00000489469 CHST13Q8NET6 341 aa18■□□□□ 0.47
SMIM11A-206ENST00000489469 SOCS4Q8WXH5 440 aa18■□□□□ 0.47
SMIM11A-206ENST00000489469 ZNF274Q96GC6 653 aaPredicted RBP18■□□□□ 0.47
SMIM11A-206ENST00000489469 TBC1D32Q96NH3 1257 aa18■□□□□ 0.47
SMIM11A-206ENST00000489469 SPZ1Q9BXG8 430 aa18■□□□□ 0.47
SMIM11A-206ENST00000489469 ARHGAP39Q9C0H5 1083 aa18■□□□□ 0.47
SMIM11A-206ENST00000489469 PORCNQ9H237 461 aa18■□□□□ 0.47
SMIM11A-206ENST00000489469 RIOX1Q9H6W3 641 aa18■□□□□ 0.47
SMIM11A-206ENST00000489469 RAVER2Q9HCJ3 691 aaKnown RBP18■□□□□ 0.47
SMIM11A-206ENST00000489469 TRIM17Q9Y577 477 aa18■□□□□ 0.47
SMIM11A-206ENST00000489469 NID2Q14112 1375 aa18■□□□□ 0.47
SMIM11A-206ENST00000489469 RXRAP19793 462 aa17.99■□□□□ 0.47
SMIM11A-206ENST00000489469 RABEP1Q15276 862 aa17.99■□□□□ 0.47
SMIM11A-206ENST00000489469 CDC37Q16543 378 aaPredicted RBP17.99■□□□□ 0.47
SMIM11A-206ENST00000489469 CCDC174Q6PII3 467 aa17.99■□□□□ 0.47
SMIM11A-206ENST00000489469 GPR142Q7Z601 462 aa17.99■□□□□ 0.47
SMIM11A-206ENST00000489469 ABRAQ8N0Z2 381 aa17.99■□□□□ 0.47
SMIM11A-206ENST00000489469 SRRDQ9UH36 339 aa17.99■□□□□ 0.47
SMIM11A-206ENST00000489469 CCPG1Q9ULG6 757 aa17.99■□□□□ 0.47
SMIM11A-206ENST00000489469 ZNF536O15090 1300 aa17.98■□□□□ 0.47
SMIM11A-206ENST00000489469 CTGFP29279 349 aa17.98■□□□□ 0.47
SMIM11A-206ENST00000489469 TMTC3Q6ZXV5 915 aa17.98■□□□□ 0.47
SMIM11A-206ENST00000489469 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.98■□□□□ 0.47
SMIM11A-206ENST00000489469 CCDC144CPQ8IYA2 1237 aa17.98■□□□□ 0.47
SMIM11A-206ENST00000489469 MTMR8Q96EF0 704 aa17.98■□□□□ 0.47
SMIM11A-206ENST00000489469 NUDT12Q9BQG2 462 aa17.98■□□□□ 0.47
SMIM11A-206ENST00000489469 CPVLQ9H3G5 476 aa17.98■□□□□ 0.47
SMIM11A-206ENST00000489469 JMJD4Q9H9V9 463 aa17.98■□□□□ 0.47
SMIM11A-206ENST00000489469 VAT1LQ9HCJ6 419 aa17.98■□□□□ 0.47
SMIM11A-206ENST00000489469 PLXNA1Q9UIW2 1896 aa17.98■□□□□ 0.47
SMIM11A-206ENST00000489469 RBBP6Q7Z6E9 1792 aaKnown RBP17.97■□□□□ 0.47
SMIM11A-206ENST00000489469 SLC15A5A6NIM6 579 aa17.97■□□□□ 0.47
SMIM11A-206ENST00000489469 ZBTB5O15062 677 aa17.97■□□□□ 0.47
SMIM11A-206ENST00000489469 FCER1AP12319 257 aa17.97■□□□□ 0.47
SMIM11A-206ENST00000489469 AK2P54819 239 aa17.97■□□□□ 0.47
SMIM11A-206ENST00000489469 QRICH1Q2TAL8 776 aa17.97■□□□□ 0.47
SMIM11A-206ENST00000489469 RAB11FIP4Q86YS3 637 aa17.97■□□□□ 0.47
SMIM11A-206ENST00000489469 RRP36Q96EU6 259 aaKnown RBP17.97■□□□□ 0.47
SMIM11A-206ENST00000489469 AGBL1Q96MI9 1066 aa17.97■□□□□ 0.47
SMIM11A-206ENST00000489469 KIF2CQ99661 725 aa17.97■□□□□ 0.47
SMIM11A-206ENST00000489469 MAF1Q9H063 256 aa17.97■□□□□ 0.47
SMIM11A-206ENST00000489469 ACAD9Q9H845 621 aa17.97■□□□□ 0.47
SMIM11A-206ENST00000489469 ALAS1P13196 640 aa17.96■□□□□ 0.47
SMIM11A-206ENST00000489469 PTPREP23469 700 aa17.96■□□□□ 0.47
SMIM11A-206ENST00000489469 PDIA3P30101 505 aaKnown RBP17.96■□□□□ 0.47
SMIM11A-206ENST00000489469 SNAP25P60880 206 aa17.96■□□□□ 0.47
SMIM11A-206ENST00000489469 IRF5Q13568 498 aa17.96■□□□□ 0.47
SMIM11A-206ENST00000489469 GRB14Q14449 540 aa17.96■□□□□ 0.47
SMIM11A-206ENST00000489469 KCTD2Q14681 263 aa17.96■□□□□ 0.47
SMIM11A-206ENST00000489469 FBXO11Q86XK2 927 aa17.96■□□□□ 0.47
SMIM11A-206ENST00000489469 AMNQ9BXJ7 453 aa17.96■□□□□ 0.47
SMIM11A-206ENST00000489469 RNF146Q9NTX7 359 aa17.96■□□□□ 0.47
SMIM11A-206ENST00000489469 SLC5A4Q9NY91 659 aa17.96■□□□□ 0.47
SMIM11A-206ENST00000489469 SEC63Q9UGP8 760 aaKnown RBP17.96■□□□□ 0.47
SMIM11A-206ENST00000489469 HPS5Q9UPZ3 1129 aa17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms